FC878494
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878494 vs. ExPASy Swiss-Prot
Match: CAX3_ORYSJ (Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 7.463e-27 Identity = 78/192 (40.62%), Postives = 104/192 (54.17%), Query Frame = 1 Query: 286 LANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRKQADVNSXXXXXXXXXXXXXXXFKYAAASSDITAKAT-LQLSRASSIVMLIGYIAYLVFQL 858 L +I+ VI +KL++L P P +II VF S+LG+TPLAER+ + TEQ+A YTGPTVGGLLNAT GNATE+IIAI+AL I VV+ F GGI + K+Q + + A VNS + S++ A+ + LSR SS +ML+ Y +YL FQL Sbjct: 41 LRSIRIVIFTSKLNLLLPFGPASIILHYTTSRHGLVFLFSMLGITPLAERLGYATEQLAIYTGPTVGGLLNATFGNATEMIIAIYALKNGMIRVVQQSLLGSILSNMLLVMGCAFFAGGIVHRNKDQVFSKATAVVNSGLLLMAVMGLMFPAVLHF--THSEVRQGASEVSLSRFSSCIMLVAYASYLYFQL 230
BLAST of FC878494 vs. ExPASy Swiss-Prot
Match: CAX4_ORYSJ (Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica GN=Os02g0138900 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.968e-19 Identity = 71/194 (36.60%), Postives = 93/194 (47.94%), Query Frame = 1 Query: 304 VILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRKQADVNSXXXXXXXXXXXXXXXFKYAAASSDITAKATLQLSRASSIVMLIGYIAYLVFQLWTHREFFEA 885 V L +KL+VL P LAI WVF LS+LG+ PLAER+ F T+ + VG LLN+ GNATELII+I AL K+ VV+ F GG+A + Q + + A VNS Y + + K+ L LSR SS +ML+ Y +YL FQL +R EA Sbjct: 67 VFLKSKLNVLIPCGFLAIFLNYMTQRYGWVFPLSMLGIIPLAERLGFATD---WQISCEVGRLLNSAFGNATELIISIHALSRGKLHVVQQCLLGSILSNLLLVLGSAFFSGGLACGKTMQTFSKADAVVNSGLLLMAVMGLLIPAALHYTHSEAQF-GKSELALSRFSSCIMLVAYASYLYFQLSNNRRRNEA 256
BLAST of FC878494 vs. ExPASy Swiss-Prot
Match: VCX1_YEAST (Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae GN=VCX1 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.361e-17 Identity = 63/210 (30.00%), Postives = 100/210 (47.62%), Query Frame = 1 Query: 277 RRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRKQADVNSXXXXXXXXXXXXXXXFK----YAAASSDITAKATLQLSRASSIVMLIGYIAYLVFQLWTHREFFEAQED 894 R + ++Q ++ + L+ L +PL +I F + F + L + PLA ++ TE++A G T+GGLLNAT GNA ELI++I AL + ++ +V+ GG R +Q +++ A S F+ + I K L+LSR +SIV+LI Y+ +L FQL +H FE QE+ Sbjct: 25 RAAVYDLQYILKASPLNFLLVFVPLGLIWGHFQLSHTLTFLFNFLAIIPLAAILANATEELADKAGNTIGGLLNATFGNAVELIVSIIALKKGQVRIVQASMLGSLLSNLLLVLGLCFIFGGYN--RVQQTFNQTAAQTMSSLLAIACASLLIPAAFRATLPHGKEDHFIDGK-ILELSRGTSIVILIVYVLFLYFQLGSHHALFEQQEE 231
BLAST of FC878494 vs. ExPASy Swiss-Prot
Match: VCX1_SCHPO (Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe GN=vcx1 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.741e-16 Identity = 53/191 (27.75%), Postives = 93/191 (48.69%), Query Frame = 1 Query: 298 QEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRKQADVNSXXXXXXXXXXXXXXXFKYAAASSDITAKATLQLSRASSIVMLIGYIAYLVFQLWTHR 870 + V++ + +++ +P+ +I F + VF L++L + PLA +SF TEQ++ +GPT+G LLNA+ GNA ELI+ + AL ++ +V+ GI R+ ++ A F Y+ + + A L +SR +++++LI Y+ LVFQL TH+ Sbjct: 54 KSVLMSSYFNLMLVFVPIGLIAGWFEWNAKSVFILNMLAIIPLASLLSFATEQLSIISGPTLGALLNASFGNAIELIVGVLALKRGELRIVQSSLLGSILSNLLLVFGMCLVTTGIR--REITTFNITVAQTMIAMLALSTATILIPATFHYSLPDNANSENALLHVSRGTAVIVLIVYVLLLVFQLKTHK 242
BLAST of FC878494 vs. ExPASy Swiss-Prot
Match: YFKE_BACSU (Putative cation exchanger yfkE OS=Bacillus subtilis GN=yfkE PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.753e-13 Identity = 54/181 (29.83%), Postives = 83/181 (45.86%), Query Frame = 1 Query: 343 IPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRKQADVNSXXXXXXXXXXXXXXXFKYAAASSDITAKAT-LQLSRASSIVMLIGYIAYLVFQLWTHREFFE 882 +PL++IG + +FA+ + + LA + TE ++ GP +GGLLNAT GNA ELII++FAL E +V F GG+ KY R++ +++ F S A+ L LS SI+M++ Y+A L F+L THR ++ Sbjct: 13 VPLSVIGSLMHWPSAVLFAVYCVTIIALASYMGRATESLSIIAGPRIGGLLNATFGNAVELIISLFALKEGLTGIVLASLTGSVLGNLLLVAGLSFFVGGL-------KYKRQEFNIHDARHNSGLLIFAIIVAFVIPEVFSVGMGNASKLNLSIGISIIMILLYVAALYFKLVTHRGVYQ 186 The following BLAST results are available for this feature:
BLAST of FC878494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878494 ID=FC878494; Name=FC878494; organism=Citrus clementina; type=EST; length=901bpback to top |