FC878498

Overview
NameFC878498
Unique NameFC878498
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length876
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878498 vs. ExPASy Swiss-Prot
Match: GUN23_ORYSJ (Endoglucanase 23 OS=Oryza sativa subsp. japonica GN=GLU12 PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 3.720e-68
Identity = 127/261 (48.66%), Postives = 165/261 (63.22%), Query Frame = 3
Query:   87 MMALTLPLIVQCHDSFNYGDALSKSLLYFESQRSGRLPH-NQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEHHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKG---YYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFG 857
            ++AL  P         +YGDAL+KS+L+FE QRSGRLP   QR  WR  S ++DG   GVDL GGYYDAGDNVKFG PMAFT TML+WGV+++G  +  A E  HA +A++W TDY +K  +HP V++++VGD   DH CW+RPEDM T+R  Y +    PGSDVAGET       S+VFR  +P Y+  LL  A+  FEF D+++G Y    E+  G   +Y    GY DELLW A WL +A+    YL Y+ +N    G
Sbjct:   25 LLALAAPSAAAAAAGHDYGDALAKSILFFEGQRSGRLPAAGQRAAWRGDSAVSDGGAAGVDLEGGYYDAGDNVKFGFPMAFTATMLAWGVVEFGDAMPPA-ERAHAADAVRWATDYLLKTISHPGVIFIQVGDPTKDHGCWERPEDMDTARTVYNISAARPGSDVAGETAAALAAASMVFRDDDPAYAARLLAGARSAFEFADEHKGAYSDDPELRAGGCPFYCDFDGYQDELLWGAAWLRRASKEGTYLDYIQNNGKTLG 284          
BLAST of FC878498 vs. ExPASy Swiss-Prot
Match: GUN24_ARATH (Endoglucanase 24 OS=Arabidopsis thaliana GN=At4g39010 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.846e-67
Identity = 124/245 (50.61%), Postives = 168/245 (68.57%), Query Frame = 3
Query:  135 NYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEHHHAIEAIKWGTDYFIKAHTH-PHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEV---VKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFG 857
            +Y DALSKS+L+FE QRSG LP++QR+TWR +SGL+DG    +DL GGYYDAGDNVKF  PMAFT TML+W VI++ GE   + E  +++ A++W ++Y +K+ +  P+ ++V+VGD   DH CW+RPEDM T R AY V+  NP S+VAGET       SI FR  +P YS  LL +A + F+F D YRG Y S+ ++   V  +Y   +G+ DELLW A WL KAT +E+YL Y+  N + FG
Sbjct:   29 DYSDALSKSILFFEGQRSGYLPNDQRMTWRRNSGLSDGWTHNIDLTGGYYDAGDNVKFNFPMAFTTTMLAWSVIEF-GEFMPSSELRNSLVALRWSSNYLLKSVSQLPNRIFVQVGDPIADHNCWERPEDMDTPRTAYAVNAPNPASEVAGETTAALSAASIAFRSSDPGYSQTLLQNAVKTFQFADMYRGAYSSNDDIKNDVCPFYCDFNGFQDELLWGAAWLRKATGDESYLNYIESNREPFG 272          
BLAST of FC878498 vs. ExPASy Swiss-Prot
Match: GUN4_ORYSJ (Endoglucanase 4 OS=Oryza sativa subsp. japonica GN=GLU14 PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 5.372e-67
Identity = 140/261 (53.64%), Postives = 168/261 (64.37%), Query Frame = 3
Query:  129 SFNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYG-----------GEISDAG---EHHHAIEAIKWGTDYFIKAHT-HPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKY-DSSIEVVKGYYPSVSGYMDELLWAAVWLYKAT--DNEAYLKYVLDNADRFG 857
            +FNY DAL K++L+FE+QRSG+LP  QRV WR  SGL+DG   GVDL GGYYDAGDNVKFGLPMAFT+TMLSW VI++G           G I   G   +  +A  A++WG DY +KA T  P  L+V+V D   DH CW+RPEDM T R  YKV  ++PGSDVAGET       SIVFR  +P YS  LL  AQ +F+F DKYRG Y DS   VV  +Y S S Y DELLWAA WL+ A+    + YL Y+  N    G
Sbjct:   22 AFNYADALDKAILFFEAQRSGKLPPGQRVAWRADSGLSDGSADGVDLAGGYYDAGDNVKFGLPMAFTVTMLSWSVIEFGDMMPARRSSFLGGIFGGGGVAQLDNARAAVRWGADYLLKAATATPDTLYVQVADPYQDHRCWERPEDMDTPRSVYKVTPQSPGSDVAGETAAALAAASIVFRVSDPSYSAKLLDAAQLVFDFADKYRGSYSDSLSSVVCPFYCSHS-YHDELLWAASWLHLASPEKKDVYLSYIGSNGHALG 281          
BLAST of FC878498 vs. ExPASy Swiss-Prot
Match: GUN22_ARATH (Endoglucanase 22 OS=Arabidopsis thaliana GN=At4g38990 PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 3.482e-66
Identity = 121/247 (48.99%), Postives = 166/247 (67.21%), Query Frame = 3
Query:  129 SFNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEHHHAIEAIKWGTDYFIKAHTH-PHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIE---VVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFG 857
            S +Y DAL+KS+L+FE QRSG LP  QR+TWRH+S L DG    VDLVGGYYDAGDN+KF  PMAFT TML+W  I +G  +S A    + + A++WG++Y +K  +  P+ ++V+VG+   DH CW+RPEDM T R AY ++   P SD+AGE        SI F++ +P YS LLL +A + FE+ D +RG Y ++ E    V  +Y SV+GY DELLW A WL +AT  ++Y+KY+++N   FG
Sbjct:   21 SHDYSDALTKSILFFEGQRSGYLPREQRMTWRHNSALNDGKNLNVDLVGGYYDAGDNIKFHFPMAFTTTMLAWSAIDFGSYMSPADLRDNLV-ALRWGSNYLLKTVSQLPNRIFVQVGEPTPDHQCWERPEDMDTPRTAYALEAPKPASDLAGEIAAALAAASIAFKRFDPRYSKLLLDNALRTFEYADSHRGSYTNNPETKLAVCPFYCSVNGYEDELLWGAAWLRRATGKDSYIKYLVENRQSFG 266          
BLAST of FC878498 vs. ExPASy Swiss-Prot
Match: GUN3_ARATH (Endoglucanase 3 OS=Arabidopsis thaliana GN=CEL5 PE=2 SV=2)

HSP 1 Score: 249.595 bits (636), Expect = 1.728e-65
Identity = 127/253 (50.20%), Postives = 168/253 (66.40%), Query Frame = 3
Query:   81 FYMMALTLPLIVQCHDSFNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEHHHAIEAIKWGTDYFIK-AHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSI-EVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYV 833
            F++  L+   +   + S NY +ALSKSLL+F+ QRSGRLP +Q+++WR  SGL+DG    VDL GGYYDAGDNVKF  PMAFT TMLSW  ++YG ++    E  ++  AI+W TDY +K A   P  L+V VGD + DH CW+RPEDM T R  Y V   NPGSDVA ET       S+VFRK++P YS LLL  A+++ +F  +YRG Y +S+   V  +Y S SGY DELLW A WL++AT++  Y  ++
Sbjct:    6 FFVFLLSALSLENTYASPNYREALSKSLLFFQGQRSGRLPSDQQLSWRSSSGLSDGSSAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSSLEYGKKMGP--ELQNSRVAIRWATDYLLKCARATPGKLYVGVGDPNGDHKCWERPEDMDTPRTVYSVSPSNPGSDVAAETAAALAASSMVFRKVDPKYSRLLLATAKKVMQFAIQYRGAYSNSLSSSVCPFYCSYSGYKDELLWGAAWLHRATNDPYYTNFI 256          
BLAST of FC878498 vs. ExPASy Swiss-Prot
Match: GUN23_ARATH (Endoglucanase 23 OS=Arabidopsis thaliana GN=At4g39000 PE=2 SV=2)

HSP 1 Score: 249.595 bits (636), Expect = 1.728e-65
Identity = 126/264 (47.73%), Postives = 168/264 (63.64%), Query Frame = 3
Query:   78 LFYMMALTLPLIVQCHDSFNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEHHHAIEAIKWGTDYFIKAHTH-PHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSS---IEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFG 857
            +F ++ L LP  +  HD   Y DAL KS+L+FE QRSGRLP  QR+ WR +S L DG     DLVGGYYDAGDNVKF  PMAFT TML+W  + +G  +S   +  H + A+KW TDY +K  +  P+ ++V VG+   DH CW+RPEDM T R A+ +D   P SD+AGE        SI F++ NP YS +LL+ A Q F++ D +RG Y  +    + V  +Y SV+GY DELLW A WL +AT  ++YL+Y++DN   FG
Sbjct:   10 VFILLLLLLPTAIP-HD---YSDALRKSILFFEGQRSGRLPKQQRMAWRRNSALNDGKNLKTDLVGGYYDAGDNVKFHFPMAFTATMLAWSSVDFGRYMSQ-HDFRHNLVAVKWATDYLLKTVSQLPNRIFVHVGEVQPDHDCWERPEDMDTPRTAFALDAPYPASDLAGEIAAALAAASIAFKQANPKYSAILLNKAVQTFQYADSHRGSYTDNPGIKQAVCPFYCSVNGYKDELLWGAAWLRRATGEDSYLRYLVDNGQAFG 268          
BLAST of FC878498 vs. ExPASy Swiss-Prot
Match: GUN20_ORYSJ (Endoglucanase 20 OS=Oryza sativa subsp. japonica GN=GLU15 PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.948e-65
Identity = 116/237 (48.95%), Postives = 158/237 (66.67%), Query Frame = 3
Query:  135 NYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEHHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFR-KLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDN 842
            +YGDAL+K++L+FE QRSGRLP NQR TWR  S LTDG E+ V+L GGYYDAGDNVKFG PMAFT+T+L W  ++YG  ++ AGE  +   AI+WG D+ ++AH  P  L+ +VGDG+ DH CW+RPEDM T R  YK+   +PGS+ A E         +  +   +  +S  LL  ++ LF+F + YRG + SS      +Y S SG+ DELLWA+ WL+KAT +  YL ++ +N
Sbjct:   40 DYGDALAKAILFFEGQRSGRLPANQRATWRGDSALTDGREENVNLTGGYYDAGDNVKFGYPMAFTVTLLGWSAVEYGAAVAAAGELGNLRAAIRWGADFLLRAHASPTTLYTQVGDGNADHQCWERPEDMDTPRTLYKITADSPGSEAAAEASAALAAAYVALKDDGDTAFSSRLLAASRSLFDFANNYRGSFQSSCP----FYCSYSGFQDELLWASAWLFKATRDAKYLDFLTNN 272          
BLAST of FC878498 vs. ExPASy Swiss-Prot
Match: GUN2_ARATH (Endoglucanase 2 OS=Arabidopsis thaliana GN=At1g19940 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.850e-65
Identity = 116/241 (48.13%), Postives = 164/241 (68.05%), Query Frame = 3
Query:  135 NYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEHHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFG 857
            NY +AL  ++ +F+ Q+SG+L +N+ ++WR  SGL DG E  +DL  G YDAGD++KFG PMAFT T+LSW +++YG +++      HA +++KW TD+ I AH  P+VL+++VGD  TDH CW RPE MT  R   K+D + PG++VA ET       S+VF++ +  YS  LL HA+QLF+F D  RG Y  +I  V+ YY S +GY DELLWAA WLY AT+++ YL +V +N + FG
Sbjct:   48 NYANALKIAMQFFDIQKSGKLENNE-ISWRGDSGLKDGSEASIDLSKGLYDAGDHMKFGFPMAFTATVLSWSILEYGDQMASLNLLDHAKDSLKWTTDFLINAHPSPNVLYIQVGDPVTDHKCWDRPETMTRKRTLTKIDTKTPGTEVAAETAAAMAAASLVFKESDTKYSSTLLKHAKQLFDFADNNRGSYSVNIPEVQSYYNS-TGYGDELLWAASWLYHATEDQTYLDFVSENGEEFG 286          
BLAST of FC878498 vs. ExPASy Swiss-Prot
Match: GUN4_THEFU (Endoglucanase E-4 OS=Thermomonospora fusca GN=celD PE=1 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 1.120e-64
Identity = 119/232 (51.29%), Postives = 155/232 (66.81%), Query Frame = 3
Query:  129 SFNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEHHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYL 824
            +FNY +AL KS+ ++E+QRSG+LP N RV+WR  SGL DG + G+DL GG+YDAGD+VKFG PMAFT TML+WG I+       +G+  +  + ++W  DYFIKAH  P+VL+V+VGDGD DH  W   E M   R ++KVD   PGSDVA ET       SIVF   +P Y+  L+ HA+QL+ F D YRG Y   +     +Y S SGY DEL+W A WLYKAT +++YL
Sbjct:   49 AFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVP-AGAFYNSWSGYQDELVWGAYWLYKATGDDSYL 279          
BLAST of FC878498 vs. ExPASy Swiss-Prot
Match: GUNA_BACPU (Endoglucanase A OS=Bacillus pumilus GN=eglA PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.463e-64
Identity = 113/236 (47.88%), Postives = 157/236 (66.53%), Query Frame = 3
Query:  129 SFNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEHHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVL 836
            S+NY + L KS+L++E+QRSGRLP + R+ WR  SGL DG + G DL GG+YDAGD+VKFGLPMA++  +L+W V +Y     +A      ++ IKW TDYF+KAHT P+  W +VGDG+ DH  W   E M  +R A+K+DE  PG++VA +T       SI+F++ +  Y+  LL HA+QL+ F D+YRGKY   +   + +Y S SGY+DEL+W  +WLY AT+ E YL   L
Sbjct:   46 SYNYVEVLQKSMLFYEAQRSGRLPESNRLNWRGDSGLKDGKDVGHDLTGGWYDAGDHVKFGLPMAYSAAVLAWTVYEYREAYEEAELLDEILDQIKWATDYFLKAHTGPNEFWAQVGDGNADHAWWGPAEVMPMNRPAFKIDEHCPGTEVAAQTAAALAAGSIIFKETDASYAAKLLTHAKQLYAFADRYRGKYTDCVTNAQPFYNSWSGYVDELIWGGIWLYLATNEETYLNKAL 281          
The following BLAST results are available for this feature:
BLAST of FC878498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
GUN23_ORYSJ3.720e-6848.66Endoglucanase 23 OS=Oryza sativa subsp. japonica G... [more]
GUN24_ARATH1.846e-6750.61Endoglucanase 24 OS=Arabidopsis thaliana GN=At4g39... [more]
GUN4_ORYSJ5.372e-6753.64Endoglucanase 4 OS=Oryza sativa subsp. japonica GN... [more]
GUN22_ARATH3.482e-6648.99Endoglucanase 22 OS=Arabidopsis thaliana GN=At4g38... [more]
GUN3_ARATH1.728e-6550.20Endoglucanase 3 OS=Arabidopsis thaliana GN=CEL5 PE... [more]
GUN23_ARATH1.728e-6547.73Endoglucanase 23 OS=Arabidopsis thaliana GN=At4g39... [more]
GUN20_ORYSJ2.948e-6548.95Endoglucanase 20 OS=Oryza sativa subsp. japonica G... [more]
GUN2_ARATH3.850e-6548.13Endoglucanase 2 OS=Arabidopsis thaliana GN=At1g199... [more]
GUN4_THEFU1.120e-6451.29Endoglucanase E-4 OS=Thermomonospora fusca GN=celD... [more]
GUNA_BACPU1.463e-6447.88Endoglucanase A OS=Bacillus pumilus GN=eglA PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA56DA09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA56DA09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878498 ID=FC878498; Name=FC878498; organism=Citrus clementina; type=EST; length=876bp
TAGAAATGGAGGAGAAAAGACAAGAGCAGTGCGTGGTGGTGAAGCAACCA
AAATATTTCCAAATTTCATTTGGTTTATTATTTTACATGATGGCTCTGAC
CTTACCCCTAATAGTACAATGTCATGACTCCTTCAACTACGGCGATGCTC
TCTCCAAGAGTCTCCTCTACTTCGAATCACAACGCTCCGGCCGGTTGCCG
CACAACCAAAGAGTCACCTGGCGCCACCACTCCGGCCTCACCGACGGCCT
AGAACAAGGAGTGGACTTGGTGGGAGGGTACTATGATGCTGGTGACAATG
TGAAGTTTGGTTTGCCAATGGCATTTACTATAACAATGCTCTCCTGGGGA
GTTATTCAGTATGGTGGAGAAATTTCCGACGCTGGCGAGCATCATCATGC
AATTGAGGCCATCAAGTGGGGAACTGATTATTTCATCAAAGCTCACACTC
ACCCTCATGTATTATGGGTTGAGGTGGGTGATGGAGACACCGATCACTAC
TGTTGGCAGCGGCCGGAAGACATGACGACGTCGCGGCGTGCTTACAAAGT
AGACGAGAGAAACCCCGGCTCGGATGTCGCCGGAGAGACGGCAGCGGCAA
TGGCGGCAGCATCAATTGTGTTTAGGAAACTAAACCCACATTACTCTCAC
CTACTATTGCACCACGCGCAACAGTTGTTTGAGTTTGGTGACAAGTACAG
AGGGAAATACGACAGTAGTATAGAGGTAGTGAAGGGGTACTATCCGTCGG
TTAGTGGATACATGGACGAGTTGTTATGGGCGGCTGTGTGGCTATACAAG
GCAACCGACAACGAGGCGTATTTGAAGTACGTGCTTGATAATGCCGATCG
TTTTGGTGGGATCACTTGGGCCATTA
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