FC878501

Overview
NameFC878501
Unique NameFC878501
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length872
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDK2_ENTHI (Cell division protein kinase 2 homolog OS=Entamoeba histolytica GN=CDC2 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.878e-12
Identity = 50/139 (35.97%), Postives = 76/139 (54.68%), Query Frame = 3
Query:   33 NLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 428
            N  VALK++   +       ++ REI  L  L++ PNVV L++ +  ED+   LV EF   DL   ++ S K         I + E +  + QIL G+  CH + I+HRD+KP N+LI  +G +KL +FG AR+   N+
Sbjct:   27 NRYVALKKIKQEREDDGIPVTSVREIAVLLELKH-PNVVDLYDIYL-EDKFLYLVFEFCDEDLYQFMSRSSK---------IPINETRSIVYQILQGLAFCHYHQILHRDMKPQNILINKNGTIKLGEFGLARLTTIND 154          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: YPC2_CAEEL (Putative serine/threonine-protein kinase C05D10.2 OS=Caenorhabditis elegans GN=C05D10.2 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.759e-12
Identity = 49/140 (35.00%), Postives = 68/140 (48.57%), Query Frame = 3
Query:   45 ALKEVHDYQSAFREIEALQILQNSPNVVVLHEYFWRE-DEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRW-MVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQP 458
            A +   D Q  FRE+  LQ     PNV+ L+  F  + D D  L  EF+  DL  VI +    ++            K++ M Q+   +   H   ++HRDLKP N+L+  D  +KLADFG AR L   E D P+G   P
Sbjct:   47 AFRNPTDSQRTFREVMFLQEFGKHPNVIKLYNIFRADNDRDIYLAFEFMEADLHNVIKKGSILKDVH----------KQYIMCQLFRAIRFLHSGNVLHRDLKPSNVLLDADCRVKLADFGLARSLSSLE-DYPEGQKMP 175          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDK9_RAT (Cell division protein kinase 9 OS=Rattus norvegicus GN=Cdk9 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.759e-12
Identity = 57/150 (38.00%), Postives = 79/150 (52.67%), Query Frame = 3
Query:    3 DVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEY-------FWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            +V+K +       VALK+V           +A REI+ LQ+L++  NVV L E        + R      LV +F   DLA +++    K         ++ EIKR M  +L+G+   HRN I+HRD+K  N+LI  DGVLKLADFG AR
Sbjct:   32 EVFKAKHRQTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE-NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--------FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDK9_MOUSE (Cell division protein kinase 9 OS=Mus musculus GN=Cdk9 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.759e-12
Identity = 57/150 (38.00%), Postives = 79/150 (52.67%), Query Frame = 3
Query:    3 DVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEY-------FWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            +V+K +       VALK+V           +A REI+ LQ+L++  NVV L E        + R      LV +F   DLA +++    K         ++ EIKR M  +L+G+   HRN I+HRD+K  N+LI  DGVLKLADFG AR
Sbjct:   32 EVFKAKHRQTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE-NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--------FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDK9_BOVIN (Cell division protein kinase 9 OS=Bos taurus GN=CDK9 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.759e-12
Identity = 57/150 (38.00%), Postives = 79/150 (52.67%), Query Frame = 3
Query:    3 DVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEY-------FWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            +V+K +       VALK+V           +A REI+ LQ+L++  NVV L E        + R      LV +F   DLA +++    K         ++ EIKR M  +L+G+   HRN I+HRD+K  N+LI  DGVLKLADFG AR
Sbjct:   32 EVFKAKHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE-NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--------FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAYO (Cell division control protein 2 homolog OS=Plasmodium yoelii yoelii GN=CRK2 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.759e-12
Identity = 53/143 (37.06%), Postives = 78/143 (54.55%), Query Frame = 3
Query:    6 VYKGRRLSDNLIVALKEVHDYQS--------AFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            VYK +  SD    ALK++   +         + REI  L+ L++S N+V L++    +    +LV E L  DL        KK  D  D G+     K +++Q+L+G+  CH + ++HRDLKP NLLI  +G LK+ADFG AR
Sbjct:   18 VYKAQN-SDGESFALKKIRLEKEDEGIPSTVSIREISILKELRHS-NIVKLYDVIHAKKR-LILVFEHLDQDL--------KKLIDVCDGGLESVTAKSFLLQLLNGIAYCHEHRVLHRDLKPQNLLINREGELKIADFGLAR 149          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDKA1_ARATH (Cyclin-dependent kinase A-1 OS=Arabidopsis thaliana GN=CDKA-1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.910e-12
Identity = 56/143 (39.16%), Postives = 74/143 (51.75%), Query Frame = 3
Query:    6 VYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQAR 410
            VYK R    N  +ALK++   Q       +A REI  L+ +Q+S N+V L +    E     LV E+L  DL       KK  +   D    +  IK ++ QIL G+  CH + ++HRDLKP NLLI      LKLADFG AR
Sbjct:   18 VYKARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHS-NIVKLQDVVHSEKR-LYLVFEYLDLDL-------KKHMDSTPDFSKDLHMIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLAR 151          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDK9B_XENLA (Cell division protein kinase 9-B OS=Xenopus laevis GN=cdk9-B PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.910e-12
Identity = 57/154 (37.01%), Postives = 80/154 (51.95%), Query Frame = 3
Query:    3 DVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEY-----------FWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            +V+K +       VALK+V           +A REI+ LQ+L++  NVV L E            + R      LV +F   DLA +++ +  K         +V EIK+ M  +L+G+   HRN I+HRD+K  N+LI  DGVLKLADFG AR
Sbjct:   32 EVFKAKHRQTGKKVALKKVLMENEKEGFPITALREIKILQLLKHE-NVVHLIEICRNKISPTANQYNRCKGTIFLVFDFCEHDLAGLLSNAHVK--------FTVAEIKKVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 176          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: Y1461_ARATH (Probable serine/threonine-protein kinase At1g54610 OS=Arabidopsis thaliana GN=At1g54610 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.413e-12
Identity = 54/145 (37.24%), Postives = 75/145 (51.72%), Query Frame = 3
Query:    3 DVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPNVVVLHEYFW-REDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 413
            +VYK + +    IVALK+V          +   REI  L+ L + PNVV L      R      LV +++  DLA + +    K         S  E+K  M Q++SG++ CH   ++HRD+K  NLLI D GVLK+ADFG A I
Sbjct:  131 NVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILVLRRLDH-PNVVKLEGLVTSRMSCSLYLVFQYMDHDLAGLASSPVVK--------FSESEVKCLMRQLISGLEHCHSRGVLHRDIKGSNLLIDDGGVLKIADFGLATI 266          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: KIN10_ARATH (SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana GN=KIN10 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.413e-12
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3
Query:   48 LKEVHDYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEF 431
            +K +   +   REI+ L++  + P+++ L+E       D  LV+E++ + +L   I E  + +ED         E + +  QI+SGV+ CHRN +VHRDLKP NLL+     +K+ADFG + I+    F
Sbjct:   78 IKNMEMEEKVRREIKILRLFMH-PHIIRLYEVI-ETPTDIYLVMEYVNSGELFDYIVEKGRLQED---------EARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHF 195          
The following BLAST results are available for this feature:
BLAST of FC878501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
CDK2_ENTHI2.878e-1235.97Cell division protein kinase 2 homolog OS=Entamoeb... [more]
YPC2_CAEEL3.759e-1235.00Putative serine/threonine-protein kinase C05D10.2 ... [more]
CDK9_RAT3.759e-1238.00Cell division protein kinase 9 OS=Rattus norvegicu... [more]
CDK9_MOUSE3.759e-1238.00Cell division protein kinase 9 OS=Mus musculus GN=... [more]
CDK9_BOVIN3.759e-1238.00Cell division protein kinase 9 OS=Bos taurus GN=CD... [more]
CDC2H_PLAYO3.759e-1237.06Cell division control protein 2 homolog OS=Plasmod... [more]
CDKA1_ARATH4.910e-1239.16Cyclin-dependent kinase A-1 OS=Arabidopsis thalian... [more]
CDK9B_XENLA4.910e-1237.01Cell division protein kinase 9-B OS=Xenopus laevis... [more]
Y1461_ARATH6.413e-1237.24Probable serine/threonine-protein kinase At1g54610... [more]
KIN10_ARATH6.413e-1234.11SNF1-related protein kinase catalytic subunit alph... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA22DH11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA22DH11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878501 ID=FC878501; Name=FC878501; organism=Citrus clementina; type=EST; length=872bp
CCGACGTGTACAAGGGCCGGCGATTATCGGACAACCTGATCGTCGCGCTG
AAGGAGGTCCACGACTACCAATCGGCGTTCCGAGAAATCGAGGCGCTGCA
GATCCTACAGAACTCACCGAACGTGGTGGTTTTGCACGAGTACTTTTGGC
GGGAGGACGAGGACGCCGTGCTGGTGCTGGAGTTTCTGAGGACCGATTTG
GCGACGGTGATTGCGGAGTCCAAGAAGAAGAGAGAGGACCGGGGCGATCG
TGGAATCAGCGTCGGTGAGATTAAGAGATGGATGGTCCAGATTTTGTCTG
GAGTGGACGCCTGTCACAGGAATACGATCGTTCATCGGGATTTGAAGCCT
GGGAATTTGTTGATCGGCGATGATGGGGTTCTAAAGTTGGCCGATTTTGG
CCAGGCAAGGATACTCCTGGGTAATGAATTCGATGCTCCTGATGGTAATT
CTCAGCCTTGTGAACCCAATGCTCCATATCAAGATAACATGTCTGAAGCT
CCACAAGTTGATCTTGAGGTAGAAGATGCATCCCCAGAAGGAGATGTTAA
TCAAGAGCAGGGTATAATGAGTAGAGAAGATTATTTTAGGGCATTAGACG
AACTAAAGGCTAAGAACTCCATAGATGAGACTGATAAGGATACGCATGTT
CATGATGGAGATACGTCATGTTTTGCAACATGCACAACCAGCGATGTAGA
AGATGATCTTTTCAAGGGTACCTATTCTTATGACGCAGAGGATGGTGGAG
ATGGTAGACAAGGTGCCCTCACTTCCTGTGTTGGAACTCGCTGGTTCAGG
GCCCCTGAACTACTTTATGGATCCACATCCTATGGACTTGAGGTTGATCT
GTGGTCATTGGGCTGCATATTT
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