FC878501

Overview
NameFC878501
Unique NameFC878501
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length872
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: Y4007_DICDI (Putative cyclin-dependent serine/threonine-protein kinase DDB_G0272797/DDB_G0274007 OS=Dictyostelium discoideum GN=DDB_G0272797 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.320e-16
Identity = 52/136 (38.24%), Postives = 78/136 (57.35%), Query Frame = 3
Query:    6 VYKGRRLSDNLIVALKEVHDYQSAFRE---IEALQILQNSPNVVVLHEYFWREDEDA-VLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 401
            V+KG     + +VALK V D      E   ++ L  L+N  N+V L ++F+ +     VL++EF+  DL  +++  +          +S+G+IK +  Q+L GV  CH N I+HRD+KP NLLI  +GVLKL DFG
Sbjct:   18 VFKGIHKITHSLVALKRVTDIAQEDGEPVEVKYLNQLKNLSNIVNLRDHFYIDKNSVLVLIMEFIEGDLWKIMSNPQCT--------LSLGQIKNFTKQLLEGVKQCHVNGIMHRDIKPANLLITTNGVLKLTDFG 145          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDK18_PONAB (Cell division protein kinase 18 OS=Pongo abelii GN=CDK18 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 9.560e-16
Identity = 59/142 (41.55%), Postives = 86/142 (60.56%), Query Frame = 3
Query:    6 VYKGR-RLSDNLIVALKEVH-DYQ-----SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            V+KGR +L++NL VALKE+  +++     +A RE+  L+ L+++ N+V LH+     D    LV E+L +DL        K+  D     +S+  +K +M Q+L G+  CH   I+HRDLKP NLLI + G LKLADFG AR
Sbjct:  156 VFKGRSKLTENL-VALKEIRLEHEEGAPCTAIREVSLLKNLKHA-NIVTLHDLI-HTDRSLTLVFEYLDSDL--------KQYLDHCGNLMSMHNVKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINERGELKLADFGLAR 286          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDK18_HUMAN (Cell division protein kinase 18 OS=Homo sapiens GN=CDK18 PE=1 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 9.560e-16
Identity = 59/142 (41.55%), Postives = 86/142 (60.56%), Query Frame = 3
Query:    6 VYKGR-RLSDNLIVALKEVH-DYQ-----SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            V+KGR +L++NL VALKE+  +++     +A RE+  L+ L+++ N+V LH+     D    LV E+L +DL        K+  D     +S+  +K +M Q+L G+  CH   I+HRDLKP NLLI + G LKLADFG AR
Sbjct:  156 VFKGRSKLTENL-VALKEIRLEHEEGAPCTAIREVSLLKNLKHA-NIVTLHDLI-HTDRSLTLVFEYLDSDL--------KQYLDHCGNLMSMHNVKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINERGELKLADFGLAR 286          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDK16_RAT (Cell division protein kinase 16 OS=Rattus norvegicus GN=Cdk16 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.249e-15
Identity = 59/141 (41.84%), Postives = 89/141 (63.12%), Query Frame = 3
Query:    6 VYKGR-RLSDNLIVALKEVH-DYQ-----SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 407
            VYKG+ +L+DNL VALKE+  +++     +A RE+  L+ L+++ N+V LH+    E +   LV E+L  DL       K+  +D G+  I++  +K ++ Q+L G+  CHR  ++HRDLKP NLLI + G LKLADFG A
Sbjct:  179 VYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHA-NIVTLHDIIHTE-KSLTLVFEYLDKDL-------KQYLDDCGNV-INMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLA 308          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDC2_EMENI (Cell division control protein 2 OS=Emericella nidulans GN=nimX PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.249e-15
Identity = 59/154 (38.31%), Postives = 80/154 (51.95%), Query Frame = 3
Query:    6 VYKGRRLSD-NLIVALKEVHDY-------QSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRG---------DRGISVGE--IKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            VYK R L+  N IVALK++           +A REI  L+ + N PN+V L      +     LV EFL  DL   +         RG          R + +G+  +K++M Q++ G+  CH + ++HRDLKP NLLI  DG LKLADFG AR
Sbjct:   18 VYKARELTHPNRIVALKKIRLEAEDEGVPSTAIREISLLKEM-NDPNIVRLLNIVHADGHKLYLVFEFLDLDLKKYMEALPVSEGGRGRALPDGSTLSRNLGLGDAMVKKFMAQLIEGIRFCHSHRVLHRDLKPQNLLIDRDGNLKLADFGLAR 170          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDC2_CHICK (Cell division control protein 2 homolog OS=Gallus gallus GN=CDC2 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.249e-15
Identity = 57/144 (39.58%), Postives = 77/144 (53.47%), Query Frame = 3
Query:    6 VYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRG--ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            VYKGR  +   +VA+K++           +A REI  L+ L + PN+V L +    +D    L+ EFL  DL        KK  D    G  +    +K ++ QIL G+  CH   ++HRDLKP NLLI D GV+KLADFG AR
Sbjct:   18 VYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELHH-PNIVCLQDVLM-QDARLYLIFEFLSMDL--------KKYLDTIPSGQYLDRSRVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDKGVIKLADFGLAR 151          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: PHO85_CANAL (Negative regulator of the PHO system OS=Candida albicans GN=PHO85 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.631e-15
Identity = 55/142 (38.73%), Postives = 79/142 (55.63%), Query Frame = 3
Query:    6 VYKGRRLSDNLIVALKEVH------DYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRG-ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            VYKGR  +   +VALKE+          +A REI  ++ L +  N+V L++    E++   LV E++  DL       KK  E  G +  + +  +K +M Q+L G+  CH N ++HRDLKP NLLI + G LKL DFG AR
Sbjct:   22 VYKGRNRATGALVALKEISLDSEEGTPSTAIREISLMKELDHE-NIVTLYDVIHTENK-LTLVFEYMDKDL-------KKYMEVHGQQSALDLKVVKSFMFQLLKGIMFCHDNRVLHRDLKPQNLLINNKGELKLGDFGLAR 154          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDC2_ORYLU (Cell division control protein 2 homolog OS=Oryzias luzonensis GN=cdc2 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.631e-15
Identity = 59/144 (40.97%), Postives = 79/144 (54.86%), Query Frame = 3
Query:    6 VYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGE--IKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            VYKGR  S   +VA+K++           +A RE+  LQ L++ PNVV L +   +E     L+ EFL  DL        KK  D    G  +    +K ++ QIL G+  CHR  ++HRDLKP NLLI + GV+KLADFG AR
Sbjct:   18 VYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQELKH-PNVVRLLDVLMQESR-LYLIFEFLSMDL--------KKYLDSIPSGQYMDPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNKGVIKLADFGLAR 151          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDC2_ORYLA (Cell division control protein 2 homolog OS=Oryzias latipes GN=cdc2 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.631e-15
Identity = 59/144 (40.97%), Postives = 79/144 (54.86%), Query Frame = 3
Query:    6 VYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGE--IKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            VYKGR  S   +VA+K++           +A RE+  LQ L++ PNVV L +   +E     L+ EFL  DL        KK  D    G  +    +K ++ QIL G+  CHR  ++HRDLKP NLLI + GV+KLADFG AR
Sbjct:   18 VYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQELKH-PNVVRLLDVLMQESR-LYLIFEFLSMDL--------KKYLDSIPSGQYMDPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNKGVIKLADFGLAR 151          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDC2_ORYJA (Cell division control protein 2 homolog OS=Oryzias javanicus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.631e-15
Identity = 59/144 (40.97%), Postives = 79/144 (54.86%), Query Frame = 3
Query:    6 VYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGE--IKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            VYKGR  S   +VA+K++           +A RE+  LQ L++ PNVV L +   +E     L+ EFL  DL        KK  D    G  +    +K ++ QIL G+  CHR  ++HRDLKP NLLI + GV+KLADFG AR
Sbjct:   18 VYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQELKH-PNVVRLLDVLMQESR-LYLIFEFLSMDL--------KKYLDSIPSGQYMDPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNKGVIKLADFGLAR 151          
The following BLAST results are available for this feature:
BLAST of FC878501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
Y4007_DICDI7.320e-1638.24Putative cyclin-dependent serine/threonine-protein... [more]
CDK18_PONAB9.560e-1641.55Cell division protein kinase 18 OS=Pongo abelii GN... [more]
CDK18_HUMAN9.560e-1641.55Cell division protein kinase 18 OS=Homo sapiens GN... [more]
CDK16_RAT1.249e-1541.84Cell division protein kinase 16 OS=Rattus norvegic... [more]
CDC2_EMENI1.249e-1538.31Cell division control protein 2 OS=Emericella nidu... [more]
CDC2_CHICK1.249e-1539.58Cell division control protein 2 homolog OS=Gallus ... [more]
PHO85_CANAL1.631e-1538.73Negative regulator of the PHO system OS=Candida al... [more]
CDC2_ORYLU1.631e-1540.97Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_ORYLA1.631e-1540.97Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_ORYJA1.631e-1540.97Cell division control protein 2 homolog OS=Oryzias... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA22DH11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA22DH11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878501 ID=FC878501; Name=FC878501; organism=Citrus clementina; type=EST; length=872bp
CCGACGTGTACAAGGGCCGGCGATTATCGGACAACCTGATCGTCGCGCTG
AAGGAGGTCCACGACTACCAATCGGCGTTCCGAGAAATCGAGGCGCTGCA
GATCCTACAGAACTCACCGAACGTGGTGGTTTTGCACGAGTACTTTTGGC
GGGAGGACGAGGACGCCGTGCTGGTGCTGGAGTTTCTGAGGACCGATTTG
GCGACGGTGATTGCGGAGTCCAAGAAGAAGAGAGAGGACCGGGGCGATCG
TGGAATCAGCGTCGGTGAGATTAAGAGATGGATGGTCCAGATTTTGTCTG
GAGTGGACGCCTGTCACAGGAATACGATCGTTCATCGGGATTTGAAGCCT
GGGAATTTGTTGATCGGCGATGATGGGGTTCTAAAGTTGGCCGATTTTGG
CCAGGCAAGGATACTCCTGGGTAATGAATTCGATGCTCCTGATGGTAATT
CTCAGCCTTGTGAACCCAATGCTCCATATCAAGATAACATGTCTGAAGCT
CCACAAGTTGATCTTGAGGTAGAAGATGCATCCCCAGAAGGAGATGTTAA
TCAAGAGCAGGGTATAATGAGTAGAGAAGATTATTTTAGGGCATTAGACG
AACTAAAGGCTAAGAACTCCATAGATGAGACTGATAAGGATACGCATGTT
CATGATGGAGATACGTCATGTTTTGCAACATGCACAACCAGCGATGTAGA
AGATGATCTTTTCAAGGGTACCTATTCTTATGACGCAGAGGATGGTGGAG
ATGGTAGACAAGGTGCCCTCACTTCCTGTGTTGGAACTCGCTGGTTCAGG
GCCCCTGAACTACTTTATGGATCCACATCCTATGGACTTGAGGTTGATCT
GTGGTCATTGGGCTGCATATTT
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