FC878501

Overview
NameFC878501
Unique NameFC878501
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length872
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDC2_ORYCU (Cell division control protein 2 homolog OS=Oryzias curvinotus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.633e-15
Identity = 58/144 (40.28%), Postives = 79/144 (54.86%), Query Frame = 3
Query:    6 VYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGE--IKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            VYKGR  S   +VA+K++           +A RE+  LQ L++ PNVV L +   +E     L+ EFL  DL        KK  D    G  +    +K ++ QIL G+  CHR  ++HRDLKP NLLI + GV+KLADFG +R
Sbjct:   18 VYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQELKH-PNVVRLLDVLMQESR-LYLIFEFLSMDL--------KKYLDSIPSGQYMDPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNKGVIKLADFGLSR 151          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDC2A_XENLA (Cell division control protein 2-A OS=Xenopus laevis GN=cdc2-A PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.633e-15
Identity = 58/144 (40.28%), Postives = 77/144 (53.47%), Query Frame = 3
Query:    6 VYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRG--ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            VYKGR  +   +VA+K++           +A REI  L+ LQ+ PN+V L +    +D    L+ EFL  DL        KK  D    G  I    +K ++ QIL G+  CH   ++HRDLKP NLLI   GV+KLADFG AR
Sbjct:   18 VYKGRHKATGQVVAMKKIRLENEEEGVPSTAIREISLLKELQH-PNIVCLLDVLM-QDSRLYLIFEFLSMDL--------KKYLDSIPSGQYIDTMLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDSKGVIKLADFGLAR 151          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDK2_BOVIN (Cell division protein kinase 2 OS=Bos taurus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.745e-15
Identity = 58/142 (40.85%), Postives = 79/142 (55.63%), Query Frame = 3
Query:    6 VYKGRRLSDNLIVALKEVH-DYQS------AFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            VYK +      +VALK++  D ++      A REI  L+ L N PN+V L +    E++   LV EFL  DL       KK  +     GI +  IK ++ Q+L G+  CH + ++HRDLKP NLLI  DG +KLADFG AR
Sbjct:   18 VYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINADGSIKLADFGLAR 150          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDC2_RAT (Cell division control protein 2 homolog OS=Rattus norvegicus GN=Cdc2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.197e-15
Identity = 57/144 (39.58%), Postives = 77/144 (53.47%), Query Frame = 3
Query:    6 VYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRG--ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            VYKGR  +   IVA+K++           +A REI  L+ L++ PN+V L +    +D    L+ EFL  DL        KK  D    G  +    +K ++ QIL G+  CH   ++HRDLKP NLLI D G +KLADFG AR
Sbjct:   18 VYKGRHRTTGQIVAMKKIRLESEEEGVPSTAIREISLLKELRH-PNIVSLQDVLM-QDSRLYLIFEFLSMDL--------KKYLDSIPPGQFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADFGLAR 151          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: PHO85_KLULA (Negative regulator of the PHO system OS=Kluyveromyces lactis GN=PHO85 PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 8.093e-15
Identity = 55/141 (39.01%), Postives = 76/141 (53.90%), Query Frame = 3
Query:    6 VYKGRRLSDNLIVALKEVH------DYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            VYKG   +  + VALKEV          +A REI  ++ L++  N+V L +    E++   LV EF+  DL   +    K       +G+ +  +K +  Q+L GV  CH N I+HRDLKP NLLI + G LKL DFG AR
Sbjct:   21 VYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHD-NIVRLFDVIHTENK-LTLVFEFMDNDLKKFMDNRNK---GNSHKGLEMDLVKYFQWQLLQGVAFCHENRILHRDLKPQNLLINNRGQLKLGDFGLAR 156          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDKD1_ARATH (Cyclin-dependent kinase D-1 OS=Arabidopsis thaliana GN=CDKD-1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.093e-15
Identity = 47/114 (41.23%), Postives = 72/114 (63.16%), Query Frame = 3
Query:   72 SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 413
            +A REI+ L+ L++ P+++ L + F  + E+  +V EF+ TDL  VI +            +S G++K ++  IL G++ CH   ++HRD+KP NLLIG +G LKLADFG ARI
Sbjct:   54 TALREIKLLKELKH-PHIIELIDAFPHK-ENLHIVFEFMETDLEAVIRDRNLY--------LSPGDVKSYLQMILKGLEYCHGKWVLHRDMKPNNLLIGPNGQLKLADFGLARI 157          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDC2_HUMAN (Cell division control protein 2 homolog OS=Homo sapiens GN=CDC2 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 8.093e-15
Identity = 56/144 (38.89%), Postives = 77/144 (53.47%), Query Frame = 3
Query:    6 VYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRG--ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            VYKGR  +   +VA+K++           +A REI  L+ L++ PN+V L +    +D    L+ EFL  DL        KK  D    G  +    +K ++ QIL G+  CH   ++HRDLKP NLLI D G +KLADFG AR
Sbjct:   18 VYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRH-PNIVSLQDVLM-QDSRLYLIFEFLSMDL--------KKYLDSIPPGQYMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADFGLAR 151          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDC2_CAEEL (Cell division control protein 2 homolog OS=Caenorhabditis elegans GN=cdk-1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.093e-15
Identity = 53/144 (36.81%), Postives = 79/144 (54.86%), Query Frame = 3
Query:    6 VYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 416
            VYKG+    N +VA+K++           +A REI  L+ LQ+ PNVV L     +E+    L+ EFL  DL   + +  K      D  + +  +K +  QIL  +  CH+  ++HRDLKP NLL+ ++G +KLADFG AR +
Sbjct:   36 VYKGKNRRTNAMVAMKKIRLESEDEGVPSTAVREISLLKELQH-PNVVGLEAVIMQENR-LFLIFEFLSFDLKRYMDQLGK------DEYLPLETLKSYTFQILQAMCFCHQRRVIHRDLKPQNLLVDNNGAIKLADFGLARAI 171          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDC2_BOVIN (Cell division control protein 2 homolog OS=Bos taurus GN=CDC2 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 8.093e-15
Identity = 56/144 (38.89%), Postives = 77/144 (53.47%), Query Frame = 3
Query:    6 VYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRG--ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            VYKGR  +   +VA+K++           +A REI  L+ L++ PN+V L +    +D    L+ EFL  DL        KK  D    G  +    +K ++ QIL G+  CH   ++HRDLKP NLLI D G +KLADFG AR
Sbjct:   18 VYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRH-PNIVSLQDVLM-QDSRLYLIFEFLSMDL--------KKYLDSIPPGQFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADFGLAR 151          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDK2_CRIGR (Cell division protein kinase 2 OS=Cricetulus griseus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.057e-14
Identity = 57/142 (40.14%), Postives = 79/142 (55.63%), Query Frame = 3
Query:    6 VYKGRRLSDNLIVALKEVH-DYQS------AFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            VYK +      +VALK++  D ++      A REI  L+ L N PN+V L +    E++   LV EFL  DL       KK  +     GI +  IK ++ Q+L G+  CH + ++HRDLKP NLLI  +G +KLADFG AR
Sbjct:   18 VYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASAVTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAEGSIKLADFGLAR 150          
The following BLAST results are available for this feature:
BLAST of FC878501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
CDC2_ORYCU3.633e-1540.28Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2A_XENLA3.633e-1540.28Cell division control protein 2-A OS=Xenopus laevi... [more]
CDK2_BOVIN4.745e-1540.85Cell division protein kinase 2 OS=Bos taurus GN=CD... [more]
CDC2_RAT6.197e-1539.58Cell division control protein 2 homolog OS=Rattus ... [more]
PHO85_KLULA8.093e-1539.01Negative regulator of the PHO system OS=Kluyveromy... [more]
CDKD1_ARATH8.093e-1541.23Cyclin-dependent kinase D-1 OS=Arabidopsis thalian... [more]
CDC2_HUMAN8.093e-1538.89Cell division control protein 2 homolog OS=Homo sa... [more]
CDC2_CAEEL8.093e-1536.81Cell division control protein 2 homolog OS=Caenorh... [more]
CDC2_BOVIN8.093e-1538.89Cell division control protein 2 homolog OS=Bos tau... [more]
CDK2_CRIGR1.057e-1440.14Cell division protein kinase 2 OS=Cricetulus grise... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA22DH11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA22DH11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878501 ID=FC878501; Name=FC878501; organism=Citrus clementina; type=EST; length=872bp
CCGACGTGTACAAGGGCCGGCGATTATCGGACAACCTGATCGTCGCGCTG
AAGGAGGTCCACGACTACCAATCGGCGTTCCGAGAAATCGAGGCGCTGCA
GATCCTACAGAACTCACCGAACGTGGTGGTTTTGCACGAGTACTTTTGGC
GGGAGGACGAGGACGCCGTGCTGGTGCTGGAGTTTCTGAGGACCGATTTG
GCGACGGTGATTGCGGAGTCCAAGAAGAAGAGAGAGGACCGGGGCGATCG
TGGAATCAGCGTCGGTGAGATTAAGAGATGGATGGTCCAGATTTTGTCTG
GAGTGGACGCCTGTCACAGGAATACGATCGTTCATCGGGATTTGAAGCCT
GGGAATTTGTTGATCGGCGATGATGGGGTTCTAAAGTTGGCCGATTTTGG
CCAGGCAAGGATACTCCTGGGTAATGAATTCGATGCTCCTGATGGTAATT
CTCAGCCTTGTGAACCCAATGCTCCATATCAAGATAACATGTCTGAAGCT
CCACAAGTTGATCTTGAGGTAGAAGATGCATCCCCAGAAGGAGATGTTAA
TCAAGAGCAGGGTATAATGAGTAGAGAAGATTATTTTAGGGCATTAGACG
AACTAAAGGCTAAGAACTCCATAGATGAGACTGATAAGGATACGCATGTT
CATGATGGAGATACGTCATGTTTTGCAACATGCACAACCAGCGATGTAGA
AGATGATCTTTTCAAGGGTACCTATTCTTATGACGCAGAGGATGGTGGAG
ATGGTAGACAAGGTGCCCTCACTTCCTGTGTTGGAACTCGCTGGTTCAGG
GCCCCTGAACTACTTTATGGATCCACATCCTATGGACTTGAGGTTGATCT
GTGGTCATTGGGCTGCATATTT
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