FC878501

Overview
NameFC878501
Unique NameFC878501
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length872
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: YP62_CAEEL (Putative serine/threonine-protein kinase B0495.2 OS=Caenorhabditis elegans GN=B0495.2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.017e-14
Identity = 51/143 (35.66%), Postives = 81/143 (56.64%), Query Frame = 3
Query:    6 VYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAV-LVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            VY+G+    + IVALK +   +       +A REI  L    N PN+V + E     + D + + +EF+  D+ +++ ++  +R  R     S+GE K  + Q+LSG++  H+  I+HRDLK  NLL+   G+LK+ADFG AR
Sbjct:  370 VYRGKDKRTDEIVALKRLKMEKEKEGFPITALREINMLLKAGNHPNIVNVKEILLGSNMDKIYMAMEFVEHDMKSLL-DTMSRRNKR----FSIGEQKTLLQQLLSGIEHMHKLWILHRDLKTSNLLMSHKGILKIADFGLAR 507          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: SNF1_CANAL (Carbon catabolite-derepressing protein kinase OS=Candida albicans GN=SNF1 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 4.017e-14
Identity = 56/156 (35.90%), Postives = 84/156 (53.85%), Query Frame = 3
Query:   81 REIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPNAPYQDNMSEAPQVDLEVEDASPEGDV 548
            REI  L++L++ P+++ L++    +DE  ++V+EF   +L   I +  K  ED         E +R+  QI++ V+ CHR+ IVHRDLKP NLL+ D   +K+ADFG + I+        DGN       +P   N   AP+V      A PE DV
Sbjct:  100 REISYLRLLRH-PHIIKLYDVIKSKDE-IIMVIEFAGKELFDYIVQRGKMPED---------EARRFFQQIIAAVEYCHRHKIVHRDLKPENLLLDDQLNVKIADFGLSNIM-------TDGNFLKTSCGSP---NYMPAPEVISGKLYAGPEVDV 234          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDK7_DICDI (Cell division protein kinase 7 OS=Dictyostelium discoideum GN=cdk7 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 4.017e-14
Identity = 51/113 (45.13%), Postives = 70/113 (61.95%), Query Frame = 3
Query:   72 SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            SA REI+ LQ L++  NVV L + F  +  +  LV E ++ DL  VI       ED+    +   +IK +M  +L G++ACHRN ++HRDLKP NLL+  +G LKLADFG AR
Sbjct:   51 SAIREIKILQELKHD-NVVNLLDIFAHKS-NVYLVFELMQWDLQEVI-------EDKSII-LKPADIKSYMKMLLQGIEACHRNWVLHRDLKPNNLLMSINGDLKLADFGLAR 153          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDK3_HUMAN (Cell division protein kinase 3 OS=Homo sapiens GN=CDK3 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.017e-14
Identity = 55/142 (38.73%), Postives = 78/142 (54.93%), Query Frame = 3
Query:    6 VYKGRRLSDNLIVALKEVH-DYQ------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            VYK +      +VALK++  D +      +A REI  L+ L++ PN+V L +    E +   LV EFL  DL       KK  +      + +  IK ++ Q+L GV  CH + ++HRDLKP NLLI + G +KLADFG AR
Sbjct:   18 VYKAKNRETGQLVALKKIRLDLEMEGVPSTAIREISLLKELKH-PNIVRLLDVVHNERK-LYLVFEFLSQDL-------KKYMDSTPGSELPLHLIKSYLFQLLQGVSFCHSHRVIHRDLKPQNLLINELGAIKLADFGLAR 150          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDK14_MOUSE (Cell division protein kinase 14 OS=Mus musculus GN=Cdk14 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.017e-14
Identity = 52/141 (36.88%), Postives = 79/141 (56.03%), Query Frame = 3
Query:    6 VYKGRRLSDNLIVALKEVHDYQ------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            VYKG+   +  +VALK +   +      +A RE   L+ L+++ N+V+LH+    + E   LV E++ TDL   +        ++   G+    +K ++ Q+L G+   H+  I+HRDLKP NLLI D G LKLADFG AR
Sbjct:  149 VYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHA-NIVLLHDIIHTK-ETLTLVFEYVHTDLCQYM--------EQHPGGLHPDNVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLAR 279          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDK10_DICDI (Probable cyclin-dependent kinase 10 OS=Dictyostelium discoideum GN=cdk10 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.017e-14
Identity = 60/161 (37.27%), Postives = 88/161 (54.66%), Query Frame = 3
Query:    6 VYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSPNVVVLHEYFWREDEDAV-LVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPC 461
            V KGR      IVALK+V   Q        ++ REI+ L+ +++ PN+V L E       D + LV E+L  D+A++I        D  ++   + EIK +++Q+L  V+  H + I+HRDLK  NLL G++G LKLADFG AR     +F  P  +  PC
Sbjct:   21 VSKGRDKETGRIVALKKVKIGQQDKDGIPLTSLREIQILKEIKH-PNIVSLLEVVIGSTGDKIYLVFEYLEHDVASLI--------DNINKPFKLSEIKCFLLQLLRAVEYLHSHWIIHRDLKCSNLLYGNNGNLKLADFGLAR-----KFGYPIESITPC 167          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDC2_RANDY (Cell division control protein 2 homolog OS=Rana dybowskii GN=CDC2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.017e-14
Identity = 57/144 (39.58%), Postives = 76/144 (52.78%), Query Frame = 3
Query:    6 VYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRG--ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            VYKG   +   IVA+K++           +A REI  L+ LQ+ PN+V L +    +D    L+ EFL  DL        KK  D    G  +    +K ++ QIL G+  CH   ++HRDLKP NLLI   GV+KLADFG AR
Sbjct:   18 VYKGVHKATGQIVAMKKIRLENEEEGVPSTAIREISLLKELQH-PNIVCLLDVLM-QDSRLYLIFEFLSMDL--------KKYLDSIPSGQYLEAMLVKSYLYQILQGIIFCHARRVLHRDLKPQNLLIDSKGVIKLADFGLAR 151          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDC28_CANAL (Cell division control protein 28 OS=Candida albicans GN=CDC28 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.017e-14
Identity = 52/136 (38.24%), Postives = 77/136 (56.62%), Query Frame = 3
Query:   30 DNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGE--IKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            +N +VALK++           +A REI  L+ +++  N+V L++    +     LV EFL  DL        KK  +   +G+ +G   IKR+M Q++ G+  CH + ++HRDLKP NLLI  +G LKLADFG AR
Sbjct:   30 NNRVVALKKIRLESEDEGVPSTAIREISLLKEMKDD-NIVRLYDIIHSDSHKLYLVFEFLDLDL--------KKYMESIPQGVGLGANMIKRFMNQLIRGIKHCHSHRVLHRDLKPQNLLIDKEGNLKLADFGLAR 156          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDK2_MESAU (Cell division protein kinase 2 OS=Mesocricetus auratus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.246e-14
Identity = 56/142 (39.44%), Postives = 78/142 (54.93%), Query Frame = 3
Query:    6 VYKGRRLSDNLIVALKEVH-DYQS------AFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            VYK +      +VALK++  D ++      A REI  L+ L N PN+V L +    E++   LV E L  DL       KK  +     GI +  IK ++ Q+L G+  CH + ++HRDLKP NLLI  +G +KLADFG AR
Sbjct:   18 VYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENK-LYLVFELLHQDL-------KKFMDASAVTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAEGSIKLADFGLAR 150          
BLAST of FC878501 vs. ExPASy Swiss-Prot
Match: CDC2_AJECA (Cell division control protein 2 OS=Ajellomyces capsulata GN=CDC2 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.246e-14
Identity = 57/155 (36.77%), Postives = 81/155 (52.26%), Query Frame = 3
Query:    6 VYKGRRLSD-NLIVALKEVHDY-------QSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDL-----ATVIAESKKKRE-------DRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 410
            VYK R L+  N IVALK++           +A REI  L+ + + PN+V L      +     LV EFL  DL     A  ++E  + +        D    G+    +K++M Q++ G+  CH + ++HRDLKP NLLI  +G LKLADFG AR
Sbjct:   18 VYKARDLTHPNRIVALKKIRLEAEDEGVPSTAIREISLLKEMHD-PNIVRLLNIVHADGHKLYLVFEFLDLDLKKYMEALPVSEGGRGKALPDGSTLDMNRLGLGEAMVKKFMAQLVEGIRYCHSHRVLHRDLKPQNLLIDREGNLKLADFGLAR 171          
The following BLAST results are available for this feature:
BLAST of FC878501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
YP62_CAEEL4.017e-1435.66Putative serine/threonine-protein kinase B0495.2 O... [more]
SNF1_CANAL4.017e-1435.90Carbon catabolite-derepressing protein kinase OS=C... [more]
CDK7_DICDI4.017e-1445.13Cell division protein kinase 7 OS=Dictyostelium di... [more]
CDK3_HUMAN4.017e-1438.73Cell division protein kinase 3 OS=Homo sapiens GN=... [more]
CDK14_MOUSE4.017e-1436.88Cell division protein kinase 14 OS=Mus musculus GN... [more]
CDK10_DICDI4.017e-1437.27Probable cyclin-dependent kinase 10 OS=Dictyosteli... [more]
CDC2_RANDY4.017e-1439.58Cell division control protein 2 homolog OS=Rana dy... [more]
CDC28_CANAL4.017e-1438.24Cell division control protein 28 OS=Candida albica... [more]
CDK2_MESAU5.246e-1439.44Cell division protein kinase 2 OS=Mesocricetus aur... [more]
CDC2_AJECA5.246e-1436.77Cell division control protein 2 OS=Ajellomyces cap... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA22DH11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA22DH11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878501 ID=FC878501; Name=FC878501; organism=Citrus clementina; type=EST; length=872bp
CCGACGTGTACAAGGGCCGGCGATTATCGGACAACCTGATCGTCGCGCTG
AAGGAGGTCCACGACTACCAATCGGCGTTCCGAGAAATCGAGGCGCTGCA
GATCCTACAGAACTCACCGAACGTGGTGGTTTTGCACGAGTACTTTTGGC
GGGAGGACGAGGACGCCGTGCTGGTGCTGGAGTTTCTGAGGACCGATTTG
GCGACGGTGATTGCGGAGTCCAAGAAGAAGAGAGAGGACCGGGGCGATCG
TGGAATCAGCGTCGGTGAGATTAAGAGATGGATGGTCCAGATTTTGTCTG
GAGTGGACGCCTGTCACAGGAATACGATCGTTCATCGGGATTTGAAGCCT
GGGAATTTGTTGATCGGCGATGATGGGGTTCTAAAGTTGGCCGATTTTGG
CCAGGCAAGGATACTCCTGGGTAATGAATTCGATGCTCCTGATGGTAATT
CTCAGCCTTGTGAACCCAATGCTCCATATCAAGATAACATGTCTGAAGCT
CCACAAGTTGATCTTGAGGTAGAAGATGCATCCCCAGAAGGAGATGTTAA
TCAAGAGCAGGGTATAATGAGTAGAGAAGATTATTTTAGGGCATTAGACG
AACTAAAGGCTAAGAACTCCATAGATGAGACTGATAAGGATACGCATGTT
CATGATGGAGATACGTCATGTTTTGCAACATGCACAACCAGCGATGTAGA
AGATGATCTTTTCAAGGGTACCTATTCTTATGACGCAGAGGATGGTGGAG
ATGGTAGACAAGGTGCCCTCACTTCCTGTGTTGGAACTCGCTGGTTCAGG
GCCCCTGAACTACTTTATGGATCCACATCCTATGGACTTGAGGTTGATCT
GTGGTCATTGGGCTGCATATTT
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