FC878605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878605 vs. ExPASy Swiss-Prot
Match: SUCC_PARDP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Paracoccus denitrificans (strain Pd 1222) GN=sucC PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.383e-35 Identity = 87/213 (40.85%), Postives = 122/213 (57.28%), Query Frame = 2 Query: 116 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPL 742 +NIHEYQ L+ +YG V G V DE K A + D VVK+QI AGGRG G FK +G KGGV + K EE E+LA +MLG+ LVT QTG GK V+++Y+ + + E+Y A+++DR T+ + ++GG IE++A P IV +D +G++D +V L A + VK LY++F E D +LEINPL Sbjct: 1 MNIHEYQAKALLRQYGAPVSDGRVVMKADEAKAAAGEL--DGPLWVVKAQIHAGGRGKGHFKEKEAGEKGGVRLAKSVEEAEELARQMLGRTLVTHQTGETGKQVNRIYIEDGSDIERELYLALLVDRGTSRVSFVASTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALGLSGAQVKQCVALVKNLYRMFIEKDMEMLEINPL 211
BLAST of FC878605 vs. ExPASy Swiss-Prot
Match: SUCC_BACP2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus pumilus (strain SAFR-032) GN=sucC PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.383e-35 Identity = 86/220 (39.09%), Postives = 128/220 (58.18%), Query Frame = 2 Query: 116 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVA 772 +NIHEYQG E++ KYG++VP G + DE KA ++ + VVK+QI AGGRG GGV I K K+EV+ A ++LG+ LVT QTGP+G+ + ++ + E + E Y ++LDR T+ +++ +GGT IE++AEK P IVKV ID G+ A +V + A++ + LY F E DC++ EINPL T +++A Sbjct: 1 MNIHEYQGKEILRKYGVSVPNGKVAFTPDEAVKASEEL--ESSVYVVKAQIHAGGRGKA-------GGVKIAKTKDEVKGFAEELLGKTLVTHQTGPEGREIKRLLIEEGCDIQKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKVVIDPAIGLQGYQAREVAFKINIPTKLVGQAVKFMTSLYNAFIEKDCSIAEINPLVVTGDGKVMA 211
BLAST of FC878605 vs. ExPASy Swiss-Prot
Match: SUCB_TRIVA (Succinyl-CoA ligase [GDP-forming] subunit beta, hydrogenosomal OS=Trichomonas vaginalis PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.383e-35 Identity = 84/222 (37.84%), Postives = 130/222 (58.56%), Query Frame = 2 Query: 110 RRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTF-KSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLV 769 R NI E+Q E+ AKY + L S +E +A + + V+K+Q+ GGRG G + ++G K GVH VK +E +A +MLG LVTKQTG G + V L + + + E+YFAI+LDR+T P++I ++GG IE++A +P I K +D GIT+E A + L ++ + +++KL+KLF SD T +E+NPLAET+ +++ Sbjct: 8 RNFNILEWQSKEICAKYNVAAGINLVARSPEEAAEAFRKM--NLPAAVIKAQVYCGGRGKGHWLETGFKSGVHFVKSADEAAKIAKEMLGHHLVTKQTGKDGLLCQAVMLSDPVEVKRELYFAILLDRQTQSPVVIASTEGGVEIEEVAAHHPEKIHKFVLDGVEGITEEVAKNISTKLGLTGKAYDNGVVEMQKLWKLFVGSDATQVEVNPLAETTDGRII 227
BLAST of FC878605 vs. ExPASy Swiss-Prot
Match: SUCC_CHLCH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlorobium chlorochromatii (strain CaD3) GN=sucC PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.418e-35 Identity = 82/222 (36.94%), Postives = 130/222 (58.56%), Query Frame = 2 Query: 116 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPD--HKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVA 772 +NIHEYQG +++ K+G+ VPKG+ S DE K+A + F + +VVK+QI AGGRG GGV + K EE ++A +M+G L+T QTGP+GK+VS++ + E + + E Y I LDR T+ +++ ++GG IE +AE+ P ++K+ ID G+ A + L + +A+ + LYK + D ++ EINPL TS +++A Sbjct: 1 MNIHEYQGKDILRKFGVTVPKGIVAYSADEAKQAAEQLFAETGSSVVVVKAQIHAGGRGKA-------GGVKLAKSPEEAFEIARQMIGMTLITHQTGPEGKVVSRLLIEEGMGIEKEFYVGITLDRATSRNVLMVSTEGGMEIETVAEETPEKLLKIQIDPLFGMQGFQAREAAFFLGLEGEQFRNAVNFITALYKAYTSIDASVAEINPLVVTSEGKVIA 215
BLAST of FC878605 vs. ExPASy Swiss-Prot
Match: SUCC_ALKMQ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Alkaliphilus metalliredigens (strain QYMF) GN=sucC PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.418e-35 Identity = 85/220 (38.64%), Postives = 130/220 (59.09%), Query Frame = 2 Query: 116 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVA 772 +NIHEYQG E+M +YGI+VP+ +V+E +A D + + VK+QI AGGRG GGV I + EE + A +L +IL+TKQTGP+GK+V++V + E L + E Y + +D T+ ++IG +GG IE++AEK P+ I K ID G+ A ++ + A +A + + +Y+LF E DC+++EINPL T ++VA Sbjct: 1 MNIHEYQGKEIMKQYGISVPRSRITFTVEEAVQAAIDL--GCEVIAVKAQIHAGGRGKA-------GGVKITRSLEETKSAAEAILDKILITKQTGPEGKVVNQVLIEEGLKIEKECYLSCAVDSTTSTVVLIGSPEGGMDIEEVAEKTPHKIFKESIDPAIGLQQYQARRLAFNMGINEACLQEAAQCIMNIYRLFMEKDCSMVEINPLITTEEHKVVA 211
BLAST of FC878605 vs. ExPASy Swiss-Prot
Match: SUCC_RHOCS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=sucC PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.770e-35 Identity = 86/222 (38.74%), Postives = 128/222 (57.66%), Query Frame = 2 Query: 116 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGL--KGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVA 772 +NIHEYQ L+ KYG+ VP+G +++E + ++ VVKSQI AGGRG G FK KGGV +VK ++V MLG++LVTKQTGP+GK V ++Y+ E + E+Y +++LDR T+ I+ ++GG IE++A P IVKV ID G+ A KV L + + + +YK F + D +L+E+NPL T +++A Sbjct: 1 MNIHEYQAKSLLKKYGVAVPRGGVAYTLEEARAVAKEL--GGPVWVVKSQIHAGGRGAGRFKDDPNGKGGVRVVKSIDDVVASTDAMLGKVLVTKQTGPEGKEVKRIYVEEGADIKRELYLSMLLDRATSRITIVASTEGGMEIEEVAHTSPEKIVKVAIDPVQGLQGYHARKVAFALGLEGKQVGACTKFLLGMYKAFTDLDMSLVEVNPLVVTGSGEVLA 220
BLAST of FC878605 vs. ExPASy Swiss-Prot
Match: SUCC_MARMM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Maricaulis maris (strain MCS10) GN=sucC PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.770e-35 Identity = 88/213 (41.31%), Postives = 125/213 (58.69%), Query Frame = 2 Query: 116 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPL 742 +NIHE+Q ++ +G V +G+A+ S DE A D P VVKSQI AGGRG G FK S KGGV + KE+V A +MLG LVT QTGP+GK V+++Y+ + + E+Y +++++R+T + ++GG IE++A + P I + ID G+TD AA V D L + R D + K LY FCE D ++LEINPL Sbjct: 1 MNIHEHQAKAVLKSFGAPVAEGVAIFSADEAAAAA-DQLPGPL-WVVKSQIHAGGRGKGKFKELGSDAKGGVRLAFSKEDVVKNAKEMLGNTLVTHQTGPEGKRVNRLYIEDGADIATELYCSLLVNRETGQVAFVVSTEGGMDIEEVAAETPEKIQTIDIDPSTGVTDASAAAVCDALKLEGQAREDMMGLAKILYTAFCEKDMSMLEINPL 211
BLAST of FC878605 vs. ExPASy Swiss-Prot
Match: SUCC_HERAR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Herminiimonas arsenicoxydans GN=sucC PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.843e-35 Identity = 91/224 (40.62%), Postives = 127/224 (56.70%), Query Frame = 2 Query: 116 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKK----LYKLFCESDCTLLEINPLAETSGKQLVA 772 +NIHEYQG E++ KYG+ PKG SVDE +A + K VVK+QI AGGRG G GGV + K +EV A +LG LVT QTGP+G++V ++ + E + E+Y +++DR + ++ S+GG IE +AE P I KV ID F G+ D +A D +A K+ +I Q + LYK F E+D +L EINPL T ++VA Sbjct: 1 MNIHEYQGKEILRKYGVTTPKGFPCFSVDEAVQAAEKL--GGKVWVVKAQIHAGGRGKG-------GGVKVAKSLDEVRKYANDILGMTLVTHQTGPEGRLVKRLLIEEGADIKKELYVGMVVDRGSQRVALMASSEGGMDIEHVAEHTPEKIHKVFIDPFKGLLDSEA----DDIARKIGVPEGSIPQARAFMQGLYKAFDETDASLAEINPLIVTGDDRIVA 211
BLAST of FC878605 vs. ExPASy Swiss-Prot
Match: SUCC_AZOSB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Azoarcus sp. (strain BH72) GN=sucC PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.843e-35 Identity = 86/210 (40.95%), Postives = 122/210 (58.10%), Query Frame = 2 Query: 116 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPL 742 + IHEYQ E++ KYG+ P+G+ SVDE KA ++ K VVK+QI AGGRG G GGV + K +EV LAG++LG LVT QTGP+G+ V ++ + E + E Y A + DR T ++ S+GG IE++A P I+KV +D G+TD A ++ G+ A A++ KKLY + E+D +L EINPL Sbjct: 1 MKIHEYQAKEVLRKYGVVTPRGIPCFSVDEAVKAAEEL--GGKIWVVKAQIHAGGRGKG-------GGVKLGKSLDEVRTLAGQILGMQLVTHQTGPEGQKVRRLLIEEGADIKKEYYVAALTDRATQKVAMMASSEGGMDIEEVAHNTPEKIIKVFVDPLAGLTDAQAIELAKGIGVPEASIPQAVDTFKKLYTCYMETDASLAEINPL 201
BLAST of FC878605 vs. ExPASy Swiss-Prot
Match: SUCC_NAUPA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=sucC PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.285e-34 Identity = 83/220 (37.73%), Postives = 127/220 (57.73%), Query Frame = 2 Query: 116 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVA 772 +NIHEYQ E+ KYG+ P+G + E ++ ++ VVK+QI AGGRG GGV + K +EVE +A +MLG LVT QTGP+GK+V KVY+ E + +E+Y ++LDR P+++ ++GG IE++AEK P I+KV ID G A K+ GL ++ + I+ LY ++ ++D ++EINPL +T + +A Sbjct: 1 MNIHEYQAKEIFRKYGVPTPRGGVAFTGPEARRVAEEL--GGNLWVVKAQIHAGGRGKA-------GGVKLAKSLDEVEKIAEEMLGMTLVTHQTGPEGKVVKKVYIEEGADIKDELYLGMVLDRALEMPVMMASTEGGMEIEEVAEKTPEKIIKVAIDPAIGFQPFHARKLAFGLGLPKDEQREFIKFASALYNVYMDNDAEMIEINPLIKTGDGKFLA 211 The following BLAST results are available for this feature:
BLAST of FC878605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878605 ID=FC878605; Name=FC878605; organism=Citrus clementina; type=EST; length=773bpback to top |