FC878624
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: WHITE_CERCA (Protein white OS=Ceratitis capitata GN=W PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.977e-16 Identity = 52/127 (40.94%), Postives = 78/127 (61.42%), Query Frame = 3 Query: 390 KTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAK--ESLKGTIK-LNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEG 761 K LL + SG A GE++AV+G+SG+GK+TL++A A R +K + TI+ LNG ++++ ++ AYV QDDL LT E L+F A R+PR +++ +K RV +I L L T+IG G Sbjct: 101 KHLLKNDSGVAYPGELLAVMGSSGAGKTTLLNASAFRSSKGVQISPSTIRMLNGHPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHMTQKQKVQRVDQVIQDLSLGKCQNTLIGVPG 227
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: ABCGO_DICDI (ABC transporter G family member 24 OS=Dictyostelium discoideum GN=abcG24 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.977e-16 Identity = 47/123 (38.21%), Postives = 75/123 (60.98%), Query Frame = 3 Query: 384 KTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIG 752 K K +L++++G G++ A++G SGSGK++L+D L+ R ++ G + +NG + + K IS YV QDD+ LT E LMFAA +LP +S K+ RV +++++LGL A IG Sbjct: 475 KRKQILDNVNGVCPPGQLTALMGLSGSGKTSLLDILSGRKNVGNIDGKVLINGAPV-GKNFKRISGYVTQDDIQIGTLTCREHLMFAALLKLPENMSLEIKQQRVASVLEELGLTRVADNPIG 596
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: ABCGI_DICDI (ABC transporter G family member 18 OS=Dictyostelium discoideum GN=abcG18 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.977e-16 Identity = 48/120 (40.00%), Postives = 75/120 (62.50%), Query Frame = 3 Query: 396 LLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGD 755 LLN I+G + G ++A++G SG+GKSTL+D LANR KG I +NG+ ++ SAYV Q D+L P+ TV E ++F+A+ RLP ++ +K+ V +++ L L ++IGD Sbjct: 830 LLNGINGYVKPGMLVALMGPSGAGKSTLLDVLANRKTGGHTKGQILINGQE-RTKYFTRTSAYVEQMDILTPVSTVREVILFSAKNRLPNSVPIQEKEEFVDNILETLNLLKIQHSLIGD 948
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: ABCG1_MOUSE (ATP-binding cassette sub-family G member 1 OS=Mus musculus GN=Abcg1 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.977e-16 Identity = 47/121 (38.84%), Postives = 73/121 (60.33%), Query Frame = 3 Query: 390 KTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIG 752 KTLL ISG+ GE++A++G SG+GKSTL++ LA + +KG + +NG + R + +S Y+MQDD+L P LTV+E +M +A +L ++ V+ ++ LGL A T G Sbjct: 98 KTLLKGISGKFNSGELVAIMGPSGAGKSTLMNILAG-YRETGMKGAVLINGMPRDLRCFRKVSCYIMQDDMLLPHLTVQEAMMVSAHLKLQE--KDEGRREMVKEILTALGLLPCANTRTG 215
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: AB31G_ARATH (ABC transporter G family member 31 OS=Arabidopsis thaliana GN=ABCG31 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.977e-16 Identity = 59/196 (30.10%), Postives = 98/196 (50.00%), Query Frame = 3 Query: 174 ETPVHQILDVSDTSSVETRSLPFVLSFNNLTYSVKARRKSITLPAVFRRQPHPLGAVTATDPVPGENLFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEG 761 + P + V+D + V + +L F LT + + +P R Q VP L LL+++SG G + A++G+SG+GK+TL+D LA R +G I+++G E + IS YV Q+D+ P +TVEE+L F+A RLP+ ++K +KK V+ ++ + L ++G G Sbjct: 795 DDPNEETALVADANQVISEKKGMILPFKPLTMTFHNVNYYVDMPKEMRSQG-----------VPETRL-----QLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYTEGDIRISGHPKEQQTFARISGYVEQNDIHSPQVTVEESLWFSASLRLPKEITKEQKKEFVEQVMRLVELDTLRYALVGLPG 974
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: AB13G_ARATH (ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.977e-16 Identity = 50/127 (39.37%), Postives = 77/127 (60.63%), Query Frame = 3 Query: 387 TKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVL----ESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGD 755 TK LLN ++G I+A++G SGSGKSTL+DALA R+A G + ++G+VL + R+ +AYV Q+D+L LTV E++ ++A RLP L++ + V+A I +GL + IG+ Sbjct: 27 TKRLLNGVNGCGEPNRILAIMGPSGSGKSTLLDALAGRLA-----GNVVMSGKVLVNGKKRRLDFGAAAYVTQEDVLLGTLTVRESISYSAHLRLPSKLTREEISDIVEATITDMGLEECSDRTIGN 148
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: SCRT_DROME (Protein scarlet OS=Drosophila melanogaster GN=st PE=1 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 3.888e-16 Identity = 51/124 (41.13%), Postives = 80/124 (64.52%), Query Frame = 3 Query: 384 KTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRI-AKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIG 752 + K ++N+ +G + G +MA++G+SGSGK+TL+ LA R A ++G I +NG + M + IS YV QDDL LTV E L F A RL R +SK ++++ ++ L+++ GL +AA+T IG Sbjct: 86 RMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILINGRRIGPFMHR-ISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIG 208
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: ABCG5_DICDI (ABC transporter G family member 5 OS=Dictyostelium discoideum GN=abcG5 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.888e-16 Identity = 53/141 (37.59%), Postives = 79/141 (56.03%), Query Frame = 3 Query: 342 VTATDPVPGENLFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEGH 764 V A DP + S+ LL DI G + G+++A++G SG+GKSTL+D LA R + G I +NG+ S I AYV Q D+L P TV E + F+A RLP ++K +++I V +++ L L + IG G+ Sbjct: 899 VKADDPDNPKKKKSQRLQLLTDIDGYVKPGQMLALMGPSGAGKSTLLDVLAQRKTGGHITGEILINGKP-PSEFTNRIRAYVEQMDVLPPTQTVREAIAFSARCRLPPEVTKEEREIFVDKIVEVLSLSSIKDLKIGVLGN 1038 HSP 2 Score: 75.8702 bits (185), Expect = 3.081e-13 Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3 Query: 369 ENLFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGD 755 EN K K LL+D+S R ++ +LG G GKST+ LA ++ + +G + NG + + +YV QDD+ P LTV+ET FA + + L++ +K++ V + LGL++A T++GD Sbjct: 142 ENKKVKIK-LLDDVSFFLRPKQMTLILGTPGCGKSTIFQMLAGQLKDKHFEGELLFNGHPINHKNHHRDISYVTQDDIHVPTLTVKETFRFALDCLGKKELTREEKQVSVDNCMKLLGLKHAENTLVGD 269
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: ABCG8_HUMAN (ATP-binding cassette sub-family G member 8 OS=Homo sapiens GN=ABCG8 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.078e-16 Identity = 44/120 (36.67%), Postives = 78/120 (65.00%), Query Frame = 3 Query: 399 LNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLK-GTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGD 755 + ++S + R G+++A++G+SG G+++L+D + R +K G I +NG+ ++++ A+V Q + L P LTV ETL F A+ RLPRT S++++ RV+ +I +L LR A T +G+ Sbjct: 88 IQNLSFKVRSGQMLAIIGSSGCGRASLLDVITGRGHGGKIKSGQIWINGQPSSPQLVRKCVAHVRQHNQLLPNLTVRETLAFIAQMRLPRTFSQAQRDKRVEDVIAELRLRQCADTRVGN 207
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: ABCG2_RAT (ATP-binding cassette sub-family G member 2 OS=Rattus norvegicus GN=Abcg2 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.078e-16 Identity = 55/172 (31.98%), Postives = 85/172 (49.42%), Query Frame = 3 Query: 243 VLSFNNLTYSVKARRKSITLPAVFRRQPHPLGAVTATDPVPGENLFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDE 758 VLSF+++TY VK + + K +L+DI+G + G + A+LG +G GKS+L+D LA R L G + +NG + K S YV+QDD++ LTV E L F+A RLP+ + +K R+ +I +LGL A + +G + Sbjct: 36 VLSFHHITYRVKVKSGFLVRKTA-------------------------EKEILSDINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPRGLSGDVLINGAPQPANF-KCSSGYVVQDDVVMGTLTVRENLQFSAALRLPKAMKTHEKNERINTIIKELGLDKVADSKVGTQ 180 The following BLAST results are available for this feature:
BLAST of FC878624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 113
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878624 ID=FC878624; Name=FC878624; organism=Citrus clementina; type=EST; length=819bpback to top |