FC878624
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: PDR5_ORYSJ (Pleiotropic drug resistance protein 5 OS=Oryza sativa subsp. japonica GN=PDR5 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.134e-14 Identity = 55/176 (31.25%), Postives = 91/176 (51.70%), Query Frame = 3 Query: 237 PFVLSFNNLTYSVKARRKSITLPAVFRRQPHPLGAVTATDPVPGENLFSKTKT-LLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEG 761 P LSFN++ Y V +PA + Q F++++ LL+DISG R G + A++G SG+GK+TL+D LA R +++G IKL+G + IS Y Q D+ P LTV E+++++A RL + K+ +K+ V+ ++ + L ++G G Sbjct: 849 PLSLSFNHMNYYVD-------MPAEMKAQG-----------------FTESRLQLLSDISGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTSGTIEGDIKLSGYPKKQETFARISGYCEQTDIHSPNLTVYESIVYSAWLRLSSEVDKNTRKVFVEEVMSLVELDVLRDALVGLPG 1000
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: ABCG8_DICDI (ABC transporter G family member 8 OS=Dictyostelium discoideum GN=abcG8 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.134e-14 Identity = 48/119 (40.34%), Postives = 73/119 (61.34%), Query Frame = 3 Query: 369 ENLFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGL 725 EN K T+L ++ G GE++A++G SGSGKSTL+D LA R + + G + +NG+ + K S YV Q+D+L TV ETL F A+ +LP +S+ +K RV+ +I+ +GL Sbjct: 63 ENSNEKEITILYNVGGVIEKGELVALMGPSGSGKSTLLDILAQRKSTGKITGQLLVNGKEIGEAYKKYCS-YVTQEDVLLQTYTVFETLKFYADLKLP-GVSEIEKIKRVEKVIEDVGL 179
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: AB43G_ARATH (ABC transporter G family member 43 OS=Arabidopsis thaliana GN=ABCG43 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.134e-14 Identity = 42/126 (33.33%), Postives = 71/126 (56.35%), Query Frame = 3 Query: 384 KTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEG 761 K LL+D++G + G + A++G SG+GK+TL+D L+ R + +KG I++ G V +S Y Q D+ P LTV+E+L ++A RLP +S K V +++ + L +++G G Sbjct: 813 KKLQLLSDVTGAFKPGVLTALMGVSGAGKTTLLDVLSGRKTRGDIKGQIEVGGYVKVQDTFSRVSGYCEQFDIHSPNLTVQESLKYSAWLRLPCNISSETKSAIVNEVLETIELEEIKDSLVGVPG 938
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: PDR15_ORYSJ (Pleiotropic drug resistance protein 15 OS=Oryza sativa subsp. japonica GN=PDR15 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14 Identity = 43/122 (35.25%), Postives = 71/122 (58.20%), Query Frame = 3 Query: 396 LLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEG 761 LL+ ISG R G + A++G SG+GK+TL+D L+ R ++G I ++G IS Y Q+D+ P +TV E+L+F+A RLP+ ++ +KKI V +++ + L ++G G Sbjct: 935 LLSGISGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYIEGEIYISGYPKNQATFARISGYCEQNDIHSPQITVRESLLFSAFLRLPKEVNDQEKKIFVDEVMELVELTGLKDAIVGLPG 1056
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: BROWN_DROVI (Protein brown OS=Drosophila virilis GN=bw PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14 Identity = 41/118 (34.75%), Postives = 76/118 (64.41%), Query Frame = 3 Query: 396 LLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVI 749 +L+D+SG + G+++A+LG SG+GK+TL+ A++ R+ + +L G + LNG +E + IS+++ + ++ T + L F + F++ R +KS+K+ V L+ +GLR+AA T I Sbjct: 45 ILHDVSGHLKTGDLIAILGGSGAGKTTLLAAISQRL-RGNLTGDVVLNGMAMERDQMTRISSFLREFEINVKTFTAYDDLYFMSHFKMHRRTTKSEKRQAVSDLLLAVGLRDAAHTRI 161
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: PDR2_ORYSJ (Probable pleiotropic drug resistance protein 2 OS=Oryza sativa subsp. japonica GN=PDR2 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.639e-14 Identity = 49/193 (25.39%), Postives = 93/193 (48.19%), Query Frame = 3 Query: 198 DVSDTSSVETRSL-----PFVLSFNNLTYSVKARRKSITLPAVFRRQPHPLGAVTATDPVPGENLFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEG 761 +++D S R + P L+F+N+ YSV ++ + + LL +SG R G + A++G SG+GK+TL+D LA R ++G I ++G + +S Y Q+D+ P +TV E+L+F+A RLP+ + + +K+ ++ +++ + L+ ++G G Sbjct: 846 EIADNSQPTQRGMVLPFAPLSLTFDNIKYSVDMPQE-----------------------MKAHGIVEDRLELLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGNITISGYPKKQETFARVSGYCEQNDIHSPQVTVSESLLFSAWLRLPKDVDSNTRKMFIEEVMELVELKPLRDALVGLPG 1015
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: CDR4_CANAL (ABC transporter CDR4 OS=Candida albicans GN=CDR4 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.639e-14 Identity = 47/128 (36.72%), Postives = 76/128 (59.38%), Query Frame = 3 Query: 381 SKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKL-NGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEG 761 S+ + +L+ +SG + G++ A++GASG+GK+TL++AL++R+ + I+L NG L+S + I YV Q DL TV E L FAA R P+++S+ +K V +I L + A V+G G Sbjct: 859 SEDRVILDHVSGWVKPGQVTALMGASGAGKTTLLNALSDRLTTGVVTEGIRLVNGRPLDSSFQRSI-GYVQQQDLHLETSTVREALEFAAYLRQPKSVSRKEKNEYVDYIIRLLEMEQYADAVVGVSG 985
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: PDR4_ORYSJ (Pleiotropic drug resistance protein 4 OS=Oryza sativa subsp. japonica GN=PDR4 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.108e-14 Identity = 50/173 (28.90%), Postives = 85/173 (49.13%), Query Frame = 3 Query: 243 VLSFNNLTYSVKARRKSITLPAVFRRQPHPLGAVTATDPVPGENLFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEG 761 VL F L+ S R S+ +P + Q + LL +SG R G + A++G SG+GK+TL+D LA R ++G I+++G + IS Y Q+D+ P +TV E+L+F+A RLP + +K+ ++ ++D + L + ++G G Sbjct: 844 VLPFAPLSISFNDVRYSVDMPEAMKAQ----------------GITEDRLLLLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGYPKKQETFARISGYCEQNDIHSPHVTVYESLVFSAWLRLPSEVDSEARKMFIEEVMDLVELTSLRGALVGLPG 1000
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: AB41G_ARATH (ABC transporter G family member 41 OS=Arabidopsis thaliana GN=ABCG41 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.108e-14 Identity = 41/126 (32.54%), Postives = 72/126 (57.14%), Query Frame = 3 Query: 384 KTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEG 761 KT+ LL DI+G + G + +++G SG+GK+TL+D L+ R + +KG I++ G +S Y Q D+ P +TVEE+L ++A RLP + K V+ +++ + L + +++G G Sbjct: 820 KTRQLLFDITGALKPGVLTSLMGVSGAGKTTLLDVLSGRKTRGIIKGEIRVGGYPKVQETFARVSGYCEQFDIHSPNITVEESLKYSAWLRLPYNIDAKTKNELVKEVLETVELEDIKDSMVGLPG 945
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: AB40G_ARATH (ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.059e-13 Identity = 41/122 (33.61%), Postives = 72/122 (59.02%), Query Frame = 3 Query: 396 LLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEG 761 LL ++G R G + A++G SG+GK+TL+D LA R + G I ++G + IS Y Q D+ P +TV E+L+++A RLP+ + K+K+KI ++ +++ + L + ++G G Sbjct: 852 LLKGVNGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGNITISGYPKNQQTFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPKEVDKNKRKIFIEEVMELVELTPLRQALVGLPG 973 The following BLAST results are available for this feature:
BLAST of FC878624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 113
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878624 ID=FC878624; Name=FC878624; organism=Citrus clementina; type=EST; length=819bpback to top |