FC878630
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878630 vs. ExPASy Swiss-Prot
Match: SSU72_CHAGB (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Chaetomium globosum GN=SSU72 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.659e-34 Identity = 77/174 (44.25%), Postives = 107/174 (61.49%), Query Frame = 1 Query: 241 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALD-----------------GSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDL 708 K ++ VC+SNQNRSME H L + + V S+GTG+ V+LPGP++ +PNVY+F T Y ++ +L KDP LY+ NG+L ML RN +K P+RWQD + G DIV T EE+ +D VV+DL R P + V VIN+++KDNH++A+IGG DL Sbjct: 26 KLKFCTVCASNQNRSMEGHLRLAQANYPVISFGTGSLVRLPGPTITQPNVYKFNETSYDSIYRELEAKDPRLYRANGLLNMLGRNRVIKWGPERWQDWQVGMPRVKHEKDQGSIGMEAGVPDIVITCEERCWDAVVDDLLNRGSPLNRPVHVINIDIKDNHQDASIGGGAMVDL 199
BLAST of FC878630 vs. ExPASy Swiss-Prot
Match: SSU72_CRYNE (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Cryptococcus neoformans GN=SSU72 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.075e-33 Identity = 72/171 (42.11%), Postives = 105/171 (61.40%), Query Frame = 1 Query: 304 LKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQXXXXXXXXXXXXXXIIAAFEKRHRRKLLYSISFY 816 + ++ F V S GTG+ V+LPGP++ +PNVY FGTPY ++ DL +DP+LY RNGILPML RN VK AP++WQ+ D+V T EE+ +D V +DL TR + + + +IN+E+KDN EEA I G+ +L + I+ A +H LL+++ FY Sbjct: 18 ITKNSFRVVSAGTGSAVRLPGPAIDKPNVYRFGTPYDDIYRDLESQDPQLYTRNGILPMLDRNRKVKKAPEKWQE-LKSVLADVVITCEERCYDAVCDDLLTRSGEYNRPIHIINIEIKDNPEEAHIAGQSILELARAIEASDDLDSDIDAILNAHGDKHPHTLLHTVGFY 187
BLAST of FC878630 vs. ExPASy Swiss-Prot
Match: SSU72_ASPFU (RNA polymerase II subunit A C-terminal domain phosphatase ssu72 OS=Aspergillus fumigatus GN=ssu72 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.189e-32 Identity = 75/180 (41.67%), Postives = 106/180 (58.89%), Query Frame = 1 Query: 235 TMKYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGTP-YKQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-------------------NALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDL 708 + K ++ VC+SNQNRSMEAH L F V S+GTG+ V+LPGPS+ +PNVY F T Y QM+D+L KD LY+ NG+L ML RN +K P+R+QD G+ D++ T EE+ +D VV+DL + + V V N++++DNHEEA +GG+ +L Sbjct: 50 SFKLKFCTVCASNQNRSMEAHLRLSTAPSPFPVISFGTGSLVRLPGPSITQPNVYNFNTTSYSQMYDELLAKDERLYRNNGLLNMLDRNRNLKWGPERFQDWVPGMPRVDHVSKGDKGALGTEGGTVDVIITCEERCWDAVVDDLMNKGAALNRPVHVFNVDIRDNHEEALVGGKAILEL 229
BLAST of FC878630 vs. ExPASy Swiss-Prot
Match: SSU72_ASPOR (RNA polymerase II subunit A C-terminal domain phosphatase ssu72 OS=Aspergillus oryzae GN=ssu72 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.552e-32 Identity = 76/178 (42.70%), Postives = 105/178 (58.99%), Query Frame = 1 Query: 241 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGTP-YKQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-------------------NALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDL 708 K R+ VC+SNQNRSMEAH L F V S+GTG+ V+LPGPS+ +PNVY F T Y QM+++L KD LY+ NG+L ML+RN +K P+R+QD G D++ T EE+ +D VV+DL + + V V N+++KDNHEEA +GG+ +L Sbjct: 27 KLRFCTVCASNQNRSMEAHLRLSTAPSPFPVISFGTGSLVRLPGPSITQPNVYNFNTTSYSQMYEELYSKDERLYRNNGLLNMLERNRNLKWGPERFQDWVPGMPRVDHVAKGDKGALGTEGGVVDVIITCEERCWDAVVDDLMNKGSLLNRPVHVFNVDIKDNHEEALVGGKAILEL 204 The following BLAST results are available for this feature:
BLAST of FC878630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878630 ID=FC878630; Name=FC878630; organism=Citrus clementina; type=EST; length=901bpback to top |