FC878690

Overview
NameFC878690
Unique NameFC878690
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length847
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878690 vs. ExPASy Swiss-Prot
Match: 1433_LILLO (14-3-3-like protein OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 373.244 bits (957), Expect = 9.771e-103
Identity = 187/237 (78.90%), Postives = 214/237 (90.30%), Query Frame = 3
Query:   66 PTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDM 776
            P+RE+ VY+AKLAEQAERYEEMV+FM+  V  +    ELTVEERNLLSVAYKNVIG+ RA+WRIISSIEQKEE R NE+HV+L+KDYR K+E+ELS +C  ILKLLDSHLVPS+TA ESKVFYLKMKGDY+RYLAEFK G ERK AAE+T+L+YK+AQDIAL +LAPTHPIRLGLALNFSVFYYEILNS ++AC +AKQAF+EAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD+
Sbjct:    6 PSREENVYMAKLAEQAERYEEMVEFMEK-VARTVDTEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVALIKDYRGKIEAELSKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYHRYLAEFKSGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDI 241          
BLAST of FC878690 vs. ExPASy Swiss-Prot
Match: 1433B_TOBAC (14-3-3-like protein B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 373.244 bits (957), Expect = 9.771e-103
Identity = 188/240 (78.33%), Postives = 214/240 (89.17%), Query Frame = 3
Query:   72 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQIDEA 791
            RE+ VY+AKLAEQAERYEEMV FM+ + TS   + ELTVEERNLLSVAYKNVIG+ RA+WRIISSIEQKEE R NE+HV  +++YRSK+ESELS++C  ILKLLDS L+PSA+AG+SKVFYLKMKGDY+RYLAEFK G ERK AAE+T+ +YKAAQDIA  +LAPTHPIRLGLALNFSVFYYEILNS ++AC +AKQAF+EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ D A
Sbjct:    3 REENVYMAKLAEQAERYEEMVSFMEKVSTSLGTSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVKCIQEYRSKIESELSNICDGILKLLDSCLIPSASAGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGA 242          
BLAST of FC878690 vs. ExPASy Swiss-Prot
Match: 1433C_TOBAC (14-3-3-like protein C OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 372.474 bits (955), Expect = 1.667e-102
Identity = 188/246 (76.42%), Postives = 218/246 (88.62%), Query Frame = 3
Query:   54 AMGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQIDEA 791
            A+    RE+ VY+AKLAEQAERYEEMV+FM+  V++S  + ELTVEERNLLSVAYKNVIG+ RA+WRIISSIEQKEE R NEEHV+ +++YRSK+E+ELS +C  ILKLLD+ L+PSA +G+SKVFYLKMKGDY+RYLAEFK G ERK AAE+T+ +YKAAQDIA T+LAPTHPIRLGLALNFSVFYYEILNS ++AC +AKQAF+EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ D A
Sbjct:    2 AVAPTAREENVYMAKLAEQAERYEEMVEFMEK-VSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGA 246          
BLAST of FC878690 vs. ExPASy Swiss-Prot
Match: 14336_SOLLC (14-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 PE=2 SV=2)

HSP 1 Score: 372.474 bits (955), Expect = 1.667e-102
Identity = 188/243 (77.37%), Postives = 215/243 (88.48%), Query Frame = 3
Query:   57 MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQID 785
            M +P RE+ VY+AKLAEQAERYEEMV+FM+ +V ++  A ELTVEERNLLSVAYKNVIG+ RA+WRIISSIEQKEE R NE+HV+ +K+YRSK+ESEL+ +C  ILKLLDS L+ SA  G+SKVFYLKMKGDY+RYLAEFK G ERK AAENT+ +YKAAQDIA  +LAPTHPIRLGLALNFSVFYYEILNS ++AC +AKQAF+EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ D
Sbjct:    1 MASP-REENVYMAKLAEQAERYEEMVEFMEKVVAAADGAEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKEYRSKIESELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD 242          
BLAST of FC878690 vs. ExPASy Swiss-Prot
Match: 14335_SOLTU (14-3-3-like protein 16R OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 372.474 bits (955), Expect = 1.667e-102
Identity = 188/243 (77.37%), Postives = 215/243 (88.48%), Query Frame = 3
Query:   57 MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQID 785
            M +P RE+ VY+AKLAEQAERYEEMV+FM+ +V ++  A ELTVEERNLLSVAYKNVIG+ RA+WRIISSIEQKEE R NE+HV+ +K+YRSK+ESEL+ +C  ILKLLDS L+ SA  G+SKVFYLKMKGDY+RYLAEFK G ERK AAENT+ +YKAAQDIA  +LAPTHPIRLGLALNFSVFYYEILNS ++AC +AKQAF+EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ D
Sbjct:    1 MASP-REENVYMAKLAEQAERYEEMVEFMEKVVAAADGAEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKEYRSKIESELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD 242          
BLAST of FC878690 vs. ExPASy Swiss-Prot
Match: 14331_MAIZE (14-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=1 SV=1)

HSP 1 Score: 372.474 bits (955), Expect = 1.667e-102
Identity = 187/241 (77.59%), Postives = 216/241 (89.63%), Query Frame = 3
Query:   69 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQIDEA 791
            +RE+ VY+AKLAEQAERYEEMV+FM+  V  +  + ELTVEERNLLSVAYKNVIG+ RA+WRIISSIEQKEEGR NE+ V+L+KDYR K+E+EL+ +C  ILKLL++HLVPS+TA ESKVFYLKMKGDYYRYLAEFK G ERK AAENTM++YKAAQDIAL +LAPTHPIRLGLALNFSVFYYEILNS ++AC++AKQAF+EAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+  D A
Sbjct:    7 SREENVYMAKLAEQAERYEEMVEFMEK-VAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNEDRVTLIKDYRGKIETELTKICDGILKLLETHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISEDPA 246          
BLAST of FC878690 vs. ExPASy Swiss-Prot
Match: 14331_ARATH (14-3-3-like protein GF14 chi OS=Arabidopsis thaliana GN=GRF1 PE=1 SV=3)

HSP 1 Score: 372.474 bits (955), Expect = 1.667e-102
Identity = 191/257 (74.32%), Postives = 221/257 (85.99%), Query Frame = 3
Query:   57 MGTP----TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQIDEA*GYGSFAP 815
            M TP     R+++VY+AKLAEQAERYEEMV+FM+  V  +    ELTVEERNLLSVAYKNVIG+ RA+WRIISSIEQKEE R N++HVSL++DYRSK+E+ELSD+C  ILKLLD+ LVP+A +G+SKVFYLKMKGDY+RYLAEFK G ERK AAE+T+ +YKAAQDIA ++LAPTHPIRLGLALNFSVFYYEILNS ++AC +AKQAF+EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ D A      AP
Sbjct:    1 MATPGASSARDEFVYMAKLAEQAERYEEMVEFMEK-VAKAVDKDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSLIRDYRSKIETELSDICDGILKLLDTILVPAAASGDSKVFYLKMKGDYHRYLAEFKSGQERKDAAEHTLTAYKAAQDIANSELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDVADDIKEAAP 256          
BLAST of FC878690 vs. ExPASy Swiss-Prot
Match: 14332_MAIZE (14-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE=2 SV=2)

HSP 1 Score: 371.703 bits (953), Expect = 2.843e-102
Identity = 187/241 (77.59%), Postives = 215/241 (89.21%), Query Frame = 3
Query:   69 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQIDEA 791
            +RE+ VY+AKLAEQAERYEEMV+FM+  V  +  + ELTVEERNLLSVAYKNVIG+ RA+WRIISSIEQKEEGR NE+ V+L+KDYR K+E+EL+ +C  ILKLL+SHLVPS+TA ESKVFYLKMKGDYYRYLAEFK G ERK AAENTM++YKAAQDIAL +LAPTHPIRLGLALNFSVFYYEILNS ++AC++AKQAF+EAI+ELDTL EESYKDSTLIMQLL DNLTLWTSD+  D A
Sbjct:    7 SREENVYMAKLAEQAERYEEMVEFMEK-VAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLSEESYKDSTLIMQLLHDNLTLWTSDISEDPA 246          
BLAST of FC878690 vs. ExPASy Swiss-Prot
Match: 14332_ORYSJ (14-3-3-like protein GF14-B OS=Oryza sativa subsp. japonica GN=GF14B PE=1 SV=2)

HSP 1 Score: 370.548 bits (950), Expect = 6.333e-102
Identity = 188/247 (76.11%), Postives = 215/247 (87.04%), Query Frame = 3
Query:   51 SAMGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQIDEA 791
            SA    +RE+ VY+AKLAEQAERYEEMV+FM+  V  +  + ELTVEERNLLSVAYKNVIG+ RA+WRIISSIEQKEE R NE+ V+L+KDYR K+E+EL+ +C  ILKLL+SHLVPS+TA ESKVFYLKMKGDYYRYLAEFK G ERK AAENTM++YKAAQDIAL +L PTHPIRLGLALNFSVFYYEILNS ++AC +AKQAF+EAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+  D A
Sbjct:    2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEK-VAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISEDTA 247          
BLAST of FC878690 vs. ExPASy Swiss-Prot
Match: 1433F_TOBAC (14-3-3-like protein F OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 370.163 bits (949), Expect = 8.271e-102
Identity = 182/237 (76.79%), Postives = 213/237 (89.87%), Query Frame = 3
Query:   69 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ 779
            +R+++VY+AKLAEQAERYEEMV FM+ +VT++    ELT+EERNLLSVAYKNVIG+ RA+WRIISSIEQKEE R NE+HV+ +K YRSK+ESEL+ +C  ILKLLDS+L+ +A+ G+SKVFYLKMKGDY+RYLAEFK G ERK AAENT+ SYK+AQDIA  +LAPTHPIRLGLALNFSVFYYEILNS ++AC +AKQAF+EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ
Sbjct:    4 SRDEFVYMAKLAEQAERYEEMVDFMEKVVTAADGGEELTIEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVTSIKTYRSKIESELTSICNGILKLLDSNLIRAASTGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLSSYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ 240          
The following BLAST results are available for this feature:
BLAST of FC878690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433_LILLO9.771e-10378.9014-3-3-like protein OS=Lilium longiflorum PE=2 SV=... [more]
1433B_TOBAC9.771e-10378.3314-3-3-like protein B OS=Nicotiana tabacum PE=2 SV... [more]
1433C_TOBAC1.667e-10276.4214-3-3-like protein C OS=Nicotiana tabacum PE=1 SV... [more]
14336_SOLLC1.667e-10277.3714-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 P... [more]
14335_SOLTU1.667e-10277.3714-3-3-like protein 16R OS=Solanum tuberosum PE=2 ... [more]
14331_MAIZE1.667e-10277.5914-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=... [more]
14331_ARATH1.667e-10274.3214-3-3-like protein GF14 chi OS=Arabidopsis thalia... [more]
14332_MAIZE2.843e-10277.5914-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE... [more]
14332_ORYSJ6.333e-10276.1114-3-3-like protein GF14-B OS=Oryza sativa subsp. ... [more]
1433F_TOBAC8.271e-10276.7914-3-3-like protein F OS=Nicotiana tabacum PE=2 SV... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA64AF11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA64AF11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878690 ID=FC878690; Name=FC878690; organism=Citrus clementina; type=EST; length=847bp
CTTTGAAGAAGATCCAATTCCCCTCCAGTTAACTTTACAGTTTCTGCAAT
TCTGCTATGGGAACCCCGACGAGAGAGCAATACGTTTACCTGGCGAAACT
CGCCGAGCAAGCCGAGCGCTATGAAGAGATGGTTAAGTTCATGGACAGCC
TCGTCACTTCCTCCACTCCGGCGACTGAACTCACCGTCGAGGAGCGCAAC
CTCCTCTCCGTTGCTTACAAGAACGTCATCGGCTCTCTTCGCGCCGCGTG
GCGTATTATCTCCTCTATCGAGCAGAAAGAGGAAGGCCGCAAGAACGAGG
AACACGTCTCGCTGGTCAAAGACTATCGGTCAAAGGTAGAGTCTGAGTTA
TCTGACGTGTGCGGGAGCATATTGAAGTTGCTGGACTCGCACCTTGTGCC
TTCGGCTACTGCTGGTGAGTCCAAAGTCTTCTATTTGAAGATGAAGGGAG
ATTACTACCGTTACTTGGCGGAGTTTAAAGTTGGTGATGAGAGGAAGGCC
GCCGCTGAAAACACTATGTTGTCTTATAAGGCGGCTCAGGATATTGCACT
GACTGATCTGGCGCCAACACACCCTATAAGGTTGGGGCTGGCACTCAACT
TCTCAGTGTTTTACTATGAGATTCTCAATTCATCAGAGAAAGCTTGTACC
ATGGCCAAACAGGCCTTTGAGGAGGCCATTGCTGAGCTGGACACTTTGGG
TGAAGAATCCTACAAGGATAGCACTCTTATCATGCAATTGCTAAGAGACA
ACCTCACTCTGTGGACCTCAGATATGCAGATAGATGAGGCATAAGGGTAT
GGATCGTTTGCTCCTCTGGGGAGGTGGGCTTTTGAATGTCATGAATT
back to top