FC878690

Overview
NameFC878690
Unique NameFC878690
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length847
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11720 contig Ccv1_Contig11720:251..1103. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878690 vs. ExPASy Swiss-Prot
Match: 1433T_RAT (14-3-3 protein theta OS=Rattus norvegicus GN=Ywhaq PE=1 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 4.883e-78
Identity = 149/239 (62.34%), Postives = 186/239 (77.82%), Query Frame = 3
Query:   72 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQIDE 788
            + + +  AKLAEQAERY++M   M ++        EL+ EERNLLSVAYKNV+G  R+AWR+ISSIEQK +   +++ + L+KDYR KVESEL  +C ++L+LLD +L+ +AT  ESKVFYLKMKGDY+RYLAE   GD+RK   EN+  +Y+ A DI+  ++ PTHPIRLGLALNFSVFYYEILN+ E ACT+AK AF+EAIAELDTL E+SYKDSTLIMQLLRDNLTLWTSD   +E
Sbjct:    3 KTELIQKAKLAEQAERYDDMATCMKAVTEQGA---ELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTD--TSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEE 236          
BLAST of FC878690 vs. ExPASy Swiss-Prot
Match: 1433T_RABIT (14-3-3 protein theta OS=Oryctolagus cuniculus GN=YWHAQ PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 4.883e-78
Identity = 149/239 (62.34%), Postives = 186/239 (77.82%), Query Frame = 3
Query:   72 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQIDE 788
            + + +  AKLAEQAERY++M   M ++        EL+ EERNLLSVAYKNV+G  R+AWR+ISSIEQK +   +++ + L+KDYR KVESEL  +C ++L+LLD +L+ +AT  ESKVFYLKMKGDY+RYLAE   GD+RK   EN+  +Y+ A DI+  ++ PTHPIRLGLALNFSVFYYEILN+ E ACT+AK AF+EAIAELDTL E+SYKDSTLIMQLLRDNLTLWTSD   +E
Sbjct:    3 KTELIQKAKLAEQAERYDDMATCMKAVTEQGA---ELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTD--TSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEE 236          
BLAST of FC878690 vs. ExPASy Swiss-Prot
Match: 1433T_MOUSE (14-3-3 protein theta OS=Mus musculus GN=Ywhaq PE=1 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 4.883e-78
Identity = 149/239 (62.34%), Postives = 186/239 (77.82%), Query Frame = 3
Query:   72 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQIDE 788
            + + +  AKLAEQAERY++M   M ++        EL+ EERNLLSVAYKNV+G  R+AWR+ISSIEQK +   +++ + L+KDYR KVESEL  +C ++L+LLD +L+ +AT  ESKVFYLKMKGDY+RYLAE   GD+RK   EN+  +Y+ A DI+  ++ PTHPIRLGLALNFSVFYYEILN+ E ACT+AK AF+EAIAELDTL E+SYKDSTLIMQLLRDNLTLWTSD   +E
Sbjct:    3 KTELIQKAKLAEQAERYDDMATCMKAVTEQGA---ELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTD--TSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEE 236          
BLAST of FC878690 vs. ExPASy Swiss-Prot
Match: 1433T_CHICK (14-3-3 protein theta OS=Gallus gallus GN=YWHAQ PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 4.883e-78
Identity = 149/239 (62.34%), Postives = 186/239 (77.82%), Query Frame = 3
Query:   72 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQIDE 788
            + + +  AKLAEQAERY++M   M ++        EL+ EERNLLSVAYKNV+G  R+AWR+ISSIEQK +   +++ + L+KDYR KVESEL  +C ++L+LLD +L+ +AT  ESKVFYLKMKGDY+RYLAE   GD+RK   EN+  +Y+ A DI+  ++ PTHPIRLGLALNFSVFYYEILN+ E ACT+AK AF+EAIAELDTL E+SYKDSTLIMQLLRDNLTLWTSD   +E
Sbjct:    3 KTELIQKAKLAEQAERYDDMATCMKAVTEQGA---ELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTD--TSDKKMQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEE 236          
BLAST of FC878690 vs. ExPASy Swiss-Prot
Match: 143BA_XENLA (14-3-3 protein beta/alpha-A OS=Xenopus laevis GN=ywhab-A PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 6.377e-78
Identity = 148/240 (61.67%), Postives = 187/240 (77.92%), Query Frame = 3
Query:   72 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQIDEA 791
            + + V  AKL+EQAERY++M   M ++        EL+ EERNLLSVAYKNV+G+ R++WR+ISSIEQK EG  N++   + ++YR KVE+EL D+C  +L LLD  LVP+AT  ESKVFYLKMKGDYYRYL+E   GD ++    ++  +Y+ A +I+ +++ PTHPIRLGLALNFSVFYYEILNS EKAC++AK AF+EAIAELDTL EESYKDSTLIMQLLRDNLTLWTS+ Q +EA
Sbjct:    3 KSELVQKAKLSEQAERYDDMAASMKAVTELGA---ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEG--NDKRQQMAREYREKVETELQDICKDVLDLLDRFLVPNATPPESKVFYLKMKGDYYRYLSEVASGDSKQETVASSQQAYQEAFEISKSEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKSAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGEEA 237          
BLAST of FC878690 vs. ExPASy Swiss-Prot
Match: 1433Z_BOMMO (14-3-3 protein zeta OS=Bombyx mori GN=14-3-3zeta PE=2 SV=2)

HSP 1 Score: 290.812 bits (743), Expect = 6.377e-78
Identity = 148/238 (62.18%), Postives = 185/238 (77.73%), Query Frame = 3
Query:   72 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQID 785
            +E+ V  AKLAEQAERY++M   M  +  +     EL+ EERNLLSVAYKNV+G+ R++WR+ISSIEQK EG + ++ ++  K+YR KVE EL ++C  +L LLD HL+P A+  ESKVFYLKMKGDYYRYLAE   G+ R +  E++  +Y+ A +I+   + PTHPIRLGLALNFSVFYYEILNS +KAC +AKQAF++AIAELDTL E+SYKDSTLIMQLLRDNLTLWTSD Q D
Sbjct:    5 KEELVQRAKLAEQAERYDDMAAAMKEVTETGV---ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA--KEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGD 237          
BLAST of FC878690 vs. ExPASy Swiss-Prot
Match: 1433B_RAT (14-3-3 protein beta/alpha OS=Rattus norvegicus GN=Ywhab PE=1 SV=3)

HSP 1 Score: 290.812 bits (743), Expect = 6.377e-78
Identity = 148/242 (61.16%), Postives = 187/242 (77.27%), Query Frame = 3
Query:   63 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQIDE 788
            T  + + V  AKLAEQAERY++M   M ++        EL+ EERNLLSVAYKNV+G+ R++WR+ISSIEQK E  +NE+   + K+YR K+E+EL D+C  +L+LLD +L+ +AT  ESKVFYLKMKGDY+RYL+E   GD ++    N+  +Y+ A +I+  ++ PTHPIRLGLALNFSVFYYEILNS EKAC++AK AF+EAIAELDTL EESYKDSTLIMQLLRDNLTLWTS+ Q DE
Sbjct:    2 TMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGH---ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--RNEKKQQMGKEYREKIEAELQDICSDVLELLDKYLILNATHAESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDE 238          
BLAST of FC878690 vs. ExPASy Swiss-Prot
Match: 1433B_XENTR (14-3-3 protein beta/alpha OS=Xenopus tropicalis GN=ywhab PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 8.329e-78
Identity = 148/240 (61.67%), Postives = 187/240 (77.92%), Query Frame = 3
Query:   72 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQIDEA 791
            + + V  AKL+EQAERY++M   M ++        EL+ EERNLLSVAYKNV+G+ R++WR+ISSIEQK EG  N++   + ++YR KVE+EL D+C  +L LLD +LVP+AT  ESKVFYLKMKGDYYRYL+E   GD ++     +  +Y+ A +I+ +++ PTHPIRLGLALNFSVFYYEILNS EKAC++AK AF+EAIAELDTL EESYKDSTLIMQLLRDNLTLWTS+ Q +EA
Sbjct:    3 KSELVQKAKLSEQAERYDDMAASMKAVTELGA---ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEG--NDKRQQMAREYREKVETELQDICKDVLGLLDKYLVPNATPPESKVFYLKMKGDYYRYLSEVASGDSKQETVTCSQQAYQEAFEISKSEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKSAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGEEA 237          
BLAST of FC878690 vs. ExPASy Swiss-Prot
Match: 143B2_DANRE (14-3-3 protein beta/alpha-2 OS=Danio rerio GN=ywhab2 PE=2 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 1.088e-77
Identity = 147/240 (61.25%), Postives = 183/240 (76.25%), Query Frame = 3
Query:   72 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQIDEA 791
            +   V  AKLAEQAERY++M   M ++        EL+ EERNLLSVAYKNV+G+ R++WR+ISSIEQK EG  NE+   + ++YR K+E+EL D+C  +L LL+ +L+ +A+  ESKVFYLKMKGDYYRYL+E   GD +    EN+  +Y+ A DI+  D+ PTHPIRLGLALNFSVFYYEILNS E AC +AK AF+EAIAELDTL E+SYKDSTLIMQLLRDNLTLWTS+ Q +EA
Sbjct:    3 KSDLVQKAKLAEQAERYDDMAAAMKAVTEGGV---ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEG--NEKKQQMAREYREKIETELQDICSDVLGLLEKYLIANASQAESKVFYLKMKGDYYRYLSEVASGDSKATTVENSQKAYQDAFDISKKDMQPTHPIRLGLALNFSVFYYEILNSPENACQLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSENQGEEA 237          
BLAST of FC878690 vs. ExPASy Swiss-Prot
Match: 1433T_PONAB (14-3-3 protein theta OS=Pongo abelii GN=YWHAQ PE=2 SV=2)

HSP 1 Score: 290.041 bits (741), Expect = 1.088e-77
Identity = 148/239 (61.92%), Postives = 186/239 (77.82%), Query Frame = 3
Query:   72 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQIDE 788
            + + +  AKLAEQAERY++M   M ++        EL+ EERNLLSVAYKNV+G  R+AWR+ISSIEQK +   +++ + L+KDYR KVESEL  +C ++L+LLD +L+ +AT  ESKVFYLKMKGDY+RYLAE   GD+RK   +N+  +Y+ A DI+  ++ PTHPIRLGLALNFSVFYYEILN+ E ACT+AK AF+EAIAELDTL E+SYKDSTLIMQLLRDNLTLWTSD   +E
Sbjct:    3 KTELIQKAKLAEQAERYDDMATCMKAVTEQGA---ELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTD--TSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEE 236          
The following BLAST results are available for this feature:
BLAST of FC878690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433T_RAT4.883e-7862.3414-3-3 protein theta OS=Rattus norvegicus GN=Ywhaq... [more]
1433T_RABIT4.883e-7862.3414-3-3 protein theta OS=Oryctolagus cuniculus GN=Y... [more]
1433T_MOUSE4.883e-7862.3414-3-3 protein theta OS=Mus musculus GN=Ywhaq PE=1... [more]
1433T_CHICK4.883e-7862.3414-3-3 protein theta OS=Gallus gallus GN=YWHAQ PE=... [more]
143BA_XENLA6.377e-7861.6714-3-3 protein beta/alpha-A OS=Xenopus laevis GN=y... [more]
1433Z_BOMMO6.377e-7862.1814-3-3 protein zeta OS=Bombyx mori GN=14-3-3zeta P... [more]
1433B_RAT6.377e-7861.1614-3-3 protein beta/alpha OS=Rattus norvegicus GN=... [more]
1433B_XENTR8.329e-7861.6714-3-3 protein beta/alpha OS=Xenopus tropicalis GN... [more]
143B2_DANRE1.088e-7761.2514-3-3 protein beta/alpha-2 OS=Danio rerio GN=ywha... [more]
1433T_PONAB1.088e-7761.9214-3-3 protein theta OS=Pongo abelii GN=YWHAQ PE=2... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA64AF11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA64AF11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878690 ID=FC878690; Name=FC878690; organism=Citrus clementina; type=EST; length=847bp
CTTTGAAGAAGATCCAATTCCCCTCCAGTTAACTTTACAGTTTCTGCAAT
TCTGCTATGGGAACCCCGACGAGAGAGCAATACGTTTACCTGGCGAAACT
CGCCGAGCAAGCCGAGCGCTATGAAGAGATGGTTAAGTTCATGGACAGCC
TCGTCACTTCCTCCACTCCGGCGACTGAACTCACCGTCGAGGAGCGCAAC
CTCCTCTCCGTTGCTTACAAGAACGTCATCGGCTCTCTTCGCGCCGCGTG
GCGTATTATCTCCTCTATCGAGCAGAAAGAGGAAGGCCGCAAGAACGAGG
AACACGTCTCGCTGGTCAAAGACTATCGGTCAAAGGTAGAGTCTGAGTTA
TCTGACGTGTGCGGGAGCATATTGAAGTTGCTGGACTCGCACCTTGTGCC
TTCGGCTACTGCTGGTGAGTCCAAAGTCTTCTATTTGAAGATGAAGGGAG
ATTACTACCGTTACTTGGCGGAGTTTAAAGTTGGTGATGAGAGGAAGGCC
GCCGCTGAAAACACTATGTTGTCTTATAAGGCGGCTCAGGATATTGCACT
GACTGATCTGGCGCCAACACACCCTATAAGGTTGGGGCTGGCACTCAACT
TCTCAGTGTTTTACTATGAGATTCTCAATTCATCAGAGAAAGCTTGTACC
ATGGCCAAACAGGCCTTTGAGGAGGCCATTGCTGAGCTGGACACTTTGGG
TGAAGAATCCTACAAGGATAGCACTCTTATCATGCAATTGCTAAGAGACA
ACCTCACTCTGTGGACCTCAGATATGCAGATAGATGAGGCATAAGGGTAT
GGATCGTTTGCTCCTCTGGGGAGGTGGGCTTTTGAATGTCATGAATT
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