FC878702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_XENTR (Eukaryotic translation initiation factor 3 subunit D OS=Xenopus tropicalis GN=eif3d PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 8.617e-47 Identity = 88/163 (53.99%), Postives = 121/163 (74.23%), Query Frame = 3 Query: 3 DMYLVARCEVQS-VVDVNNQRSFLTLNALNEFDSKY-SGVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 485 D+ LV RCE + N + SF+ + LNE+DS+Y +GVDWRQKL++QRGAV+ATELKNN+ KLA+WT +LLA ++ +KLGYVSR H +D HV+L +KP +FA QINLS N WGI++ +VD+CMKL+EGKY+++KDP+K +RIY +P F +D Sbjct: 371 DIDLVVRCEHDGFMTGANGEVSFVNIKTLNEWDSRYCNGVDWRQKLDSQRGAVIATELKNNSYKLARWTCCALLAGSEYLKLGYVSRCHVKDSTRHVVLGTQQFKPNEFANQINLSMENAWGILRCVVDICMKLDEGKYLILKDPNKQVIRIYSLPDGTFSSD 533
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_PONAB (Eukaryotic translation initiation factor 3 subunit D OS=Pongo abelii GN=EIF3D PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 1.125e-46 Identity = 86/163 (52.76%), Postives = 122/163 (74.85%), Query Frame = 3 Query: 3 DMYLVARCEVQSVVD-VNNQRSFLTLNALNEFDSKY-SGVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 485 D+ L+ RCE V+ N + SF+ + LNE+DS++ +GVDWRQKL++QRGAV+ATELKNN+ KLA+WT +LLA ++ +KLGYVSR H +D HVIL +KP +FA+QINLS N WGI++ ++D+CMKL EGKY+++KDP+K +R+Y +P F +D Sbjct: 368 DIDLIVRCEHDGVMTGANGEVSFINIKTLNEWDSRHCNGVDWRQKLDSQRGAVIATELKNNSYKLARWTCCALLAGSEYLKLGYVSRYHVKDSSRHVILGTQQFKPNEFASQINLSVENAWGILRCVIDICMKLEEGKYLILKDPNKQVIRVYSLPDGTFSSD 530
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_HUMAN (Eukaryotic translation initiation factor 3 subunit D OS=Homo sapiens GN=EIF3D PE=1 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 1.125e-46 Identity = 86/163 (52.76%), Postives = 122/163 (74.85%), Query Frame = 3 Query: 3 DMYLVARCEVQSVVD-VNNQRSFLTLNALNEFDSKY-SGVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 485 D+ L+ RCE V+ N + SF+ + LNE+DS++ +GVDWRQKL++QRGAV+ATELKNN+ KLA+WT +LLA ++ +KLGYVSR H +D HVIL +KP +FA+QINLS N WGI++ ++D+CMKL EGKY+++KDP+K +R+Y +P F +D Sbjct: 368 DIDLIVRCEHDGVMTGANGEVSFINIKTLNEWDSRHCNGVDWRQKLDSQRGAVIATELKNNSYKLARWTCCALLAGSEYLKLGYVSRYHVKDSSRHVILGTQQFKPNEFASQINLSVENAWGILRCVIDICMKLEEGKYLILKDPNKQVIRVYSLPDGTFSSD 530
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_BOVIN (Eukaryotic translation initiation factor 3 subunit D OS=Bos taurus GN=EIF3D PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 1.125e-46 Identity = 86/163 (52.76%), Postives = 122/163 (74.85%), Query Frame = 3 Query: 3 DMYLVARCEVQSVVD-VNNQRSFLTLNALNEFDSKY-SGVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 485 D+ L+ RCE V+ N + SF+ + LNE+DS++ +GVDWRQKL++QRGAV+ATELKNN+ KLA+WT +LLA ++ +KLGYVSR H +D HVIL +KP +FA+QINLS N WGI++ ++D+CMKL EGKY+++KDP+K +R+Y +P F +D Sbjct: 368 DIDLIVRCEHDGVMTGANGEVSFINIKTLNEWDSRHCNGVDWRQKLDSQRGAVIATELKNNSYKLARWTCCALLAGSEYLKLGYVSRYHVKDSSRHVILGTQQFKPNEFASQINLSVENAWGILRCVIDICMKLEEGKYLILKDPNKQVIRVYSLPDGTFSSD 530
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EI3D2_DROVI (Eukaryotic translation initiation factor 3 subunit D-2 OS=Drosophila virilis GN=eIF3-S7-2 PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.470e-46 Identity = 85/163 (52.15%), Postives = 129/163 (79.14%), Query Frame = 3 Query: 3 DMYLVARCEVQSVV-DVNNQRSFLTLNALNEFDSKYSG-VDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 485 D+ L+ARC+ V+ + FL++ ALNE+DSK + V+WRQKL++QRGAVLA+EL+NNA KLAKWT +++LA +D +KLGYVSRV+ +DH HVIL + +KP++FATQINL+ N WG+++ +VD+ +K +GKY+++KDP+KP +R+Y++P +AF++D Sbjct: 373 DVVLIARCKHNGVIKSPAGELQFLSIKALNEWDSKAANSVEWRQKLDSQRGAVLASELRNNACKLAKWTVEAVLAGSDQLKLGYVSRVNRKDHLRHVILGMQQFKPQEFATQINLNMDNAWGVLRCLVDIVLKQPDGKYLIMKDPNKPMIRLYDIPDNAFDSD 535
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EI3D2_DROPS (Eukaryotic translation initiation factor 3 subunit D-2 OS=Drosophila pseudoobscura pseudoobscura GN=eIF3-S7-2 PE=3 SV=2) HSP 1 Score: 186.808 bits (473), Expect = 1.470e-46 Identity = 89/162 (54.94%), Postives = 126/162 (77.78%), Query Frame = 3 Query: 3 DMYLVARCEVQSVVD-VNNQRSFLTLNALNEFDSKYSG-VDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEN 482 ++ L+ARC+ V+ N + FL++ ALNE+DSK S ++WRQKL+TQ GAVLA+EL+NNA KLA+WT +S+L+ +D +KLGYVSRV RDH HVIL +KP++F+TQINLS N WGI++ ++D+ MK +GKY+L+KDP+KP VR+Y+VP +AFE+ Sbjct: 368 NIILIARCKHNGVLQGPNGEVQFLSIRALNEWDSKASNSLEWRQKLDTQHGAVLASELRNNACKLARWTVESVLSGSDQLKLGYVSRVSTRDHLRHVILRTQQFKPQEFSTQINLSMDNAWGILRCLIDIVMKQPDGKYLLMKDPNKPMVRLYDVPENAFES 529
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_CHAGB (Eukaryotic translation initiation factor 3 subunit D OS=Chaetomium globosum GN=CHGG_05977 PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.920e-46 Identity = 92/165 (55.76%), Postives = 125/165 (75.76%), Query Frame = 3 Query: 9 YLVARCEVQSVVD--VNNQRSFLTLNALNEFDSKYSG----VDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 485 YLV R E+ +V + + F+T++ALNEFDSK G +DWR KL +QRGAV+ATE+KNN+ KLA+WT QS+LA AD+MKLG+VSRV P+ + HVIL +G+KPKDFA Q+NL +N WGIV++I D+C++ EGKYVLVKDP+K +R+YEVP + ++D Sbjct: 406 YLVVRTELDAVQKNPTSGEDQFVTVHALNEFDSKAQGSGGALDWRTKLVSQRGAVVATEMKNNSCKLARWTVQSILAKADVMKLGFVSRVTPKANDKHVILGCVGWKPKDFANQMNLQLSNGWGIVRTIADMCLQREEGKYVLVKDPNKNILRLYEVPANGLDDD 570
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EI3D2_DROMO (Eukaryotic translation initiation factor 3 subunit D-2 OS=Drosophila mojavensis GN=eIF3-S7-2 PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 2.507e-46 Identity = 84/163 (51.53%), Postives = 129/163 (79.14%), Query Frame = 3 Query: 3 DMYLVARCEVQSVV-DVNNQRSFLTLNALNEFDSKYSG-VDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 485 D+ L+ARC+ V+ + + F+++ ALNE+DSK + V+WRQKL++QRGAVLA+EL+NNA KLAKWT +++LA +D +KLGYVSRV+ DH HVIL + +KP++FATQINL+ N WG+++ +VD+ +K +GKY+++KDP+KP +R+Y++P +AF++D Sbjct: 373 DVVLIARCKHNGVIKSPSGELQFVSIKALNEWDSKAANSVEWRQKLDSQRGAVLASELRNNACKLAKWTVEAVLAGSDQLKLGYVSRVNRNDHLRHVILGLQQFKPQEFATQINLNMDNAWGVLRCLVDIVLKQPDGKYLIMKDPNKPMIRLYDIPENAFDSD 535
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_RAT (Eukaryotic translation initiation factor 3 subunit D OS=Rattus norvegicus GN=Eif3d PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 3.275e-46 Identity = 85/163 (52.15%), Postives = 122/163 (74.85%), Query Frame = 3 Query: 3 DMYLVARCEVQSVVD-VNNQRSFLTLNALNEFDSKY-SGVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 485 D+ L+ RCE V+ N + SF+ + LNE+DS++ +GVDWRQKL++QRGAV+ATELKNN+ KLA+WT +LLA ++ +KLGYVSR H +D HVIL +KP +FA+QINLS N WGI++ ++D+CMKL EGKY+++KDP+K +R+Y +P F ++ Sbjct: 368 DIDLIVRCEHDGVMTGANGEVSFINIKTLNEWDSRHCNGVDWRQKLDSQRGAVIATELKNNSYKLARWTCCALLAGSEYLKLGYVSRYHVKDSSRHVILGTQQFKPNEFASQINLSVENAWGILRCVIDICMKLEEGKYLILKDPNKQVIRVYSLPDGTFSSE 530
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_MOUSE (Eukaryotic translation initiation factor 3 subunit D OS=Mus musculus GN=Eif3d PE=1 SV=2) HSP 1 Score: 185.652 bits (470), Expect = 3.275e-46 Identity = 85/163 (52.15%), Postives = 122/163 (74.85%), Query Frame = 3 Query: 3 DMYLVARCEVQSVVD-VNNQRSFLTLNALNEFDSKY-SGVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 485 D+ L+ RCE V+ N + SF+ + LNE+DS++ +GVDWRQKL++QRGAV+ATELKNN+ KLA+WT +LLA ++ +KLGYVSR H +D HVIL +KP +FA+QINLS N WGI++ ++D+CMKL EGKY+++KDP+K +R+Y +P F ++ Sbjct: 368 DIDLIVRCEHDGVMTGANGEVSFINIKTLNEWDSRHCNGVDWRQKLDSQRGAVIATELKNNSYKLARWTCCALLAGSEYLKLGYVSRYHVKDSSRHVILGTQQFKPNEFASQINLSVENAWGILRCVIDICMKLEEGKYLILKDPNKQVIRVYSLPDGTFSSE 530 The following BLAST results are available for this feature:
BLAST of FC878702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878702 ID=FC878702; Name=FC878702; organism=Citrus clementina; type=EST; length=911bpback to top |