FC878702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_MACFA (Eukaryotic translation initiation factor 3 subunit D OS=Macaca fascicularis GN=EIF3D PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 3.275e-46 Identity = 86/163 (52.76%), Postives = 121/163 (74.23%), Query Frame = 3 Query: 3 DMYLVARCEVQSVVD-VNNQRSFLTLNALNEFDSKY-SGVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 485 D+ L+ RCE V+ N SF+ + LNE+DS++ +GVDWRQKL++QRGAV+ATELKNN+ KLA+WT +LLA ++ +KLGYVSR H +D HVIL +KP +FA+QINLS N WGI++ ++D+CMKL EGKY+++KDP+K +R+Y +P F +D Sbjct: 368 DIDLIVRCEHDGVMTGANGGVSFINIKTLNEWDSRHCNGVDWRQKLDSQRGAVIATELKNNSYKLARWTCCALLAGSEYLKLGYVSRYHVKDSSRHVILGTQQFKPNEFASQINLSVENAWGILRCVIDICMKLEEGKYLILKDPNKQVIRVYSLPDGTFSSD 530
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_DANRE (Eukaryotic translation initiation factor 3 subunit D OS=Danio rerio GN=eif3d PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 3.275e-46 Identity = 85/163 (52.15%), Postives = 121/163 (74.23%), Query Frame = 3 Query: 3 DMYLVARCEVQSVVD-VNNQRSFLTLNALNEFDSKY-SGVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 485 D+ L+ RCE V+ N + SF+ + LNE+DS+Y +GVDWRQKL++QRGAVLATELKNN+ KLA+WT ++LA ++ +KLGYVSR H +D HV+L +KP +FA+QINLS N WGI++ ++D+C KL EGKY+++KDP+K +R+Y +P F +D Sbjct: 371 DIDLIVRCEHDGVMTGANGEVSFINVKTLNEWDSRYCNGVDWRQKLDSQRGAVLATELKNNSYKLARWTCCAILAGSEYLKLGYVSRYHVKDSSRHVVLGTQQFKPNEFASQINLSMENAWGILRCVIDICRKLEEGKYLILKDPNKQVIRVYSLPDGTFSSD 533
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_PHANO (Eukaryotic translation initiation factor 3 subunit D OS=Phaeosphaeria nodorum GN=SNOG_04247 PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 2.123e-45 Identity = 88/166 (53.01%), Postives = 128/166 (77.11%), Query Frame = 3 Query: 6 MYLVARCEVQSVV--DVNNQRSFLTLNALNEFDSKYSG----VDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 485 ++L+ R E+ +VV ++N + +LT+ ALNEFD+K G +DWR KL +QRGAVLATE+KNN+ KLA+W QS+LA AD MKLG+VSR +P+++ +HVIL V+ KP+DFA+Q+ L+ N WGIV++IVD+ ++++EGKYVLVKDP+K +R+Y+VP FE + Sbjct: 396 LHLIVRTELDAVVKNNINGEDQYLTIKALNEFDNKAQGSGGALDWRSKLASQRGAVLATEMKNNSCKLARWAVQSILAKADTMKLGFVSRTNPKNNNDHVILGVLTNKPRDFASQMALNLNNGWGIVRTIVDMVLRMDEGKYVLVKDPNKSLLRLYQVPLHTFEEE 561
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_SCHPO (Eukaryotic translation initiation factor 3 subunit D OS=Schizosaccharomyces pombe GN=moe1 PE=1 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 8.918e-44 Identity = 86/161 (53.42%), Postives = 120/161 (74.53%), Query Frame = 3 Query: 12 LVARCEVQSVV-DVNNQRSFLTLNALNEFDSKYSGV----DWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFE 479 L+ R EV V + N ++++ ALNE+D K++ V DWR KLE+QRGAV ATE+KNN+ KLA+WT ++LLA D MK+G+VSR + RD +H IL V+ YKP D A+Q+NLS +N WGIV++I D+C+K+ +GKYVLVKDP++P +R+Y VPP+ FE Sbjct: 394 LMVRTEVDGYVKNPANDVQYISIKALNEYDPKFTNVTGSVDWRSKLESQRGAVFATEMKNNSCKLARWTVEALLAGVDSMKVGFVSRSNARDAQHHGILGVVAYKPADLASQMNLSLSNGWGIVRTIADVCLKMPDGKYVLVKDPNRPILRLYSVPPNTFE 554
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_NEMVE (Eukaryotic translation initiation factor 3 subunit D OS=Nematostella vectensis GN=v1g235689 PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 3.389e-43 Identity = 82/159 (51.57%), Postives = 115/159 (72.33%), Query Frame = 3 Query: 12 LVARCEVQSVVD-VNNQRSFLTLNALNEFDSKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 485 L+ RCE +++ + + + LNE+D K +GVDWRQKL++QRGAVLATELKNN+ KLAKWTA S+LA ++ +KLGYVSRV+ D H IL ++P++FATQI L+ N WG+++ I+D+CMK EGK +++KDPSK +RIY++P FE D Sbjct: 378 LIVRCEHDAIMQGPRGETCLVNIKTLNEWDPKMTGVDWRQKLDSQRGAVLATELKNNSCKLAKWTANSILAGSEYLKLGYVSRVNFLDTSKHTILGTQQFRPREFATQIALNMDNAWGVLRCIIDICMKQPEGKLLILKDPSKGVIRIYDIPNSTFETD 536
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_NEUCR (Eukaryotic translation initiation factor 3 subunit D OS=Neurospora crassa GN=NCU07380 PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 9.860e-43 Identity = 87/167 (52.10%), Postives = 124/167 (74.25%), Query Frame = 3 Query: 9 YLVARCEVQSVVD--VNNQRSFLTLNALNEFDSKYSG----VDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMK--LNEGKYVLVKDPSKPQVRIYEVPPDAFEND 485 +LV R E+ +V + + +T++ALNE+DSK G +DWR KL +QRGAV+ATE+KNN+ KLA+WT QS+LA AD+MKLG+VSRV+P+ + HVIL V+G+KPKDFA Q+NL +N WGIV++I D+C+K + K+VLVKDP+K +R+YEVP + + + Sbjct: 409 FLVVRTEIDAVQKNATDGKNQLVTVHALNEWDSKAQGAGGALDWRTKLASQRGAVVATEMKNNSCKLARWTVQSILAKADVMKLGFVSRVNPKVNDKHVILGVVGWKPKDFANQMNLQLSNGWGIVRTIADMCLKSESEDAKFVLVKDPNKNILRLYEVPAGSLDEE 575
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_ASPFU (Eukaryotic translation initiation factor 3 subunit D OS=Aspergillus fumigatus GN=AFUA_2G14670 PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.288e-42 Identity = 89/171 (52.05%), Postives = 120/171 (70.18%), Query Frame = 3 Query: 12 LVARCEVQSVVD--VNNQRSFLTLNALNEFDSKYSG----VDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNE-------GKYVLVKDPSKPQVRIYEVPPDAFEND 485 ++ R EV +V+ V + L + ALNEFDSK G +DWR KL +QRGAV+ATE+KNN+ KLA+WT Q++LA AD MKLG+VSR +PR +HVIL V+GYKP++FA Q+NL+ N WGIV++IVD L+ KYVL+KDP++P +R+Y VPP+ FE D Sbjct: 398 MIVRTEVDAVMKNPVGGEDQHLIVKALNEFDSKAPGSGGALDWRSKLWSQRGAVVATEMKNNSIKLARWTTQAILAKADAMKLGFVSRANPRSATSHVILGVVGYKPREFAAQMNLNLGNGWGIVRTIVDRIRALDAEEEEDKVKKYVLIKDPNRPVIRLYSVPPNTFEED 568
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_ASPFC (Eukaryotic translation initiation factor 3 subunit D OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_030310 PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.288e-42 Identity = 89/171 (52.05%), Postives = 120/171 (70.18%), Query Frame = 3 Query: 12 LVARCEVQSVVD--VNNQRSFLTLNALNEFDSKYSG----VDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNE-------GKYVLVKDPSKPQVRIYEVPPDAFEND 485 ++ R EV +V+ V + L + ALNEFDSK G +DWR KL +QRGAV+ATE+KNN+ KLA+WT Q++LA AD MKLG+VSR +PR +HVIL V+GYKP++FA Q+NL+ N WGIV++IVD L+ KYVL+KDP++P +R+Y VPP+ FE D Sbjct: 398 MIVRTEVDAVMKNPVGGEDQHLIVKALNEFDSKAPGSGGALDWRSKLWSQRGAVVATEMKNNSIKLARWTTQAILAKADAMKLGFVSRANPRSATSHVILGVVGYKPREFAAQMNLNLGNGWGIVRTIVDRIRALDAEEEEDKVKKYVLIKDPNRPVIRLYSVPPNTFEED 568
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_NEOFI (Eukaryotic translation initiation factor 3 subunit D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=NFIA_089900 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 2.196e-42 Identity = 88/171 (51.46%), Postives = 120/171 (70.18%), Query Frame = 3 Query: 12 LVARCEVQSVVD--VNNQRSFLTLNALNEFDSKYSG----VDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNE-------GKYVLVKDPSKPQVRIYEVPPDAFEND 485 ++ R EV +V+ V + L + ALNEFDSK G +DWR KL +QRGAV+ATE+KNN+ KLA+WT Q++LA AD MKLG++SR +PR +HVIL V+GYKP++FA Q+NL+ N WGIV++IVD L+ KYVL+KDP++P +R+Y VPP+ FE D Sbjct: 398 MIVRTEVDAVMKNPVGGEDQQLIVKALNEFDSKAPGSGGALDWRSKLWSQRGAVVATEMKNNSIKLARWTTQAILAKADAMKLGFISRANPRSATSHVILGVVGYKPREFAAQMNLNLGNGWGIVRTIVDRIRSLDAEEEEDKVKKYVLIKDPNRPVIRLYSVPPNTFEED 568
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_EMENI (Eukaryotic translation initiation factor 3 subunit D OS=Emericella nidulans GN=AN7540 PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 8.347e-42 Identity = 89/171 (52.05%), Postives = 119/171 (69.59%), Query Frame = 3 Query: 12 LVARCEVQSVVD--VNNQRSFLTLNALNEFDSKYSG----VDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEG-------KYVLVKDPSKPQVRIYEVPPDAFEND 485 ++ R EV ++V VN + L + ALNEFDSK G +DWR KL +QRGAV+ATE+KNN+ KLA+WT Q++LA AD MKLG+VSR +PR HV+L V GYKP++FA Q+NL+ N WGIV++IVD L+ KY+LVKDP++P +R+Y VP +AFE D Sbjct: 399 MIVRTEVDALVKNPVNGEDQQLVVKALNEFDSKAQGSGGSLDWRSKLYSQRGAVVATEMKNNSCKLARWTTQAILAKADGMKLGFVSRANPRSAAAHVVLGVAGYKPREFAAQMNLNLGNGWGIVRTIVDRIRALDADEEEDKVTKYILVKDPNRPVLRLYSVPANAFEED 569 The following BLAST results are available for this feature:
BLAST of FC878702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878702 ID=FC878702; Name=FC878702; organism=Citrus clementina; type=EST; length=911bpback to top |