FC878702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_ASPOR (Eukaryotic translation initiation factor 3 subunit D OS=Aspergillus oryzae GN=AO090026000811 PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 7.066e-41 Identity = 88/171 (51.46%), Postives = 118/171 (69.01%), Query Frame = 3 Query: 12 LVARCEVQSVVD--VNNQRSFLTLNALNEFDSKYSG----VDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNE-------GKYVLVKDPSKPQVRIYEVPPDAFEND 485 +V R EV +++ VN + L + ALNEFDSK G +DWR KL +QRGAV+ATE+KNN+ KLA+WT Q++LA AD MKLG+VSR +PR HV+L V+GYKP+D A Q+NL+ N WGIV++IVD L+ KYVL+KDP++P +R+Y VP + FE D Sbjct: 396 MVVRTEVDALLKNPVNGEDQQLIVKALNEFDSKAQGSGNALDWRSKLWSQRGAVVATEMKNNSLKLARWTTQAVLAKADGMKLGFVSRANPRSAAGHVVLGVVGYKPRDLAAQMNLNLGNGWGIVRTIVDRIRALDAEEDEEKVKKYVLIKDPNRPVLRLYSVPANTFEED 566
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_ASPNC (Eukaryotic translation initiation factor 3 subunit D OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An15g03780 PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.574e-40 Identity = 86/171 (50.29%), Postives = 117/171 (68.42%), Query Frame = 3 Query: 12 LVARCEVQSVVD--VNNQRSFLTLNALNEFDSKYSG----VDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEG-------KYVLVKDPSKPQVRIYEVPPDAFEND 485 ++ R EV +++ VN + L + ALNEFDSK G +DWR KL +QRGAV+ATE+KNN+ KLA+WT Q++LA AD MKLG+VSR +PR HV+L V+GYKP+D A Q+NL+ N WGIV++IVD L+ KYVL+KDP++P +R+Y VP FE + Sbjct: 399 MIVRTEVDAIMKNPVNGEDQQLLVKALNEFDSKAQGSGGALDWRSKLWSQRGAVVATEMKNNSVKLARWTTQAILAKADGMKLGFVSRANPRSAAGHVVLGVVGYKPRDLAAQMNLNLGNGWGIVRTIVDRIRALDADEDEDKVTKYVLIKDPNRPVLRLYSVPATTFEEE 569
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_ASPCL (Eukaryotic translation initiation factor 3 subunit D OS=Aspergillus clavatus GN=ACLA_072810 PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.574e-40 Identity = 86/171 (50.29%), Postives = 116/171 (67.84%), Query Frame = 3 Query: 12 LVARCEVQSVVD--VNNQRSFLTLNALNEFDSKYSG----VDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEG-------KYVLVKDPSKPQVRIYEVPPDAFEND 485 L+ R EV +V+ V+ + L + ALNEFDSK G +DWR KL +QRGAV+ATE+KNN+ KLA+W Q++LA AD MKLG+VSR +PR HV+L V+ YKP+D A Q+NL+ N WGIV++IVD L+ KYVL+KDP++P +R+Y VP + FE D Sbjct: 399 LIVRTEVDAVMKNPVSGEEQQLVVKALNEFDSKAPGSGGALDWRSKLWSQRGAVVATEMKNNSIKLARWATQAILAKADAMKLGFVSRANPRSAAGHVVLGVVSYKPRDLAAQMNLNLGNGWGIVRTIVDRIQALDANEEEDKVTKYVLIKDPNRPVLRLYSVPANTFEED 569
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_COCIM (Eukaryotic translation initiation factor 3 subunit D OS=Coccidioides immitis GN=CIMG_02370 PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.507e-40 Identity = 86/178 (48.31%), Postives = 123/178 (69.10%), Query Frame = 3 Query: 12 LVARCEVQSVV--DVNNQRSFLTLNALNEFDSKYSG----VDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLN-----EG---------KYVLVKDPSKPQVRIYEVPPDAFEND 485 ++ R E+ +V+ +++ + +TL ALNEFD K G +DWR KL +QRGAV+ATE+KNN KLA+WT Q++LA +D+MKLG+V+R +PR H+IL V+GYKP++FA Q+NL+ AN WGIV++I+DL L+ EG KY+LVKDP+K VR+Y VP + FE + Sbjct: 402 IIVRTEIDAVLKNNISGEDQHVTLKALNEFDHKAQGAGGALDWRSKLYSQRGAVVATEMKNNNVKLARWTTQAILAKSDVMKLGFVTRANPRSATAHMILGVIGYKPREFALQMNLNMANGWGIVRTIIDLVNSLDARDEEEGDDAQEDKIKKYILVKDPNKSVVRLYSVPANTFEEE 579
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_CRYNE (Eukaryotic translation initiation factor 3 subunit D OS=Cryptococcus neoformans GN=CNB01420 PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 5.982e-40 Identity = 76/142 (53.52%), Postives = 105/142 (73.94%), Query Frame = 3 Query: 69 LTLNALNEFDSKYSG-----VDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFE 479 +T+ ALNE+D + G +DWR+ L+TQ+GA+LA+E+KNN+ K A+W QS+LA + MK+GY+SR +PRD H I+ V +KP DFA Q+N+S AN WGIV++I DL +K EGK+VLVKDP+ P VR+Y+VP D FE Sbjct: 393 VTVKALNEYDPRVQGGSGKPLDWRKNLDTQKGAILASEMKNNSAKFARWAIQSILAGVEQMKMGYISRANPRDAQRHTIVGVQSFKPLDFARQMNVSLANGWGIVRTIADLVLKQPEGKFVLVKDPNNPLVRLYKVPDDTFE 534
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_CAEEL (Eukaryotic translation initiation factor 3 subunit D OS=Caenorhabditis elegans GN=eif-3.D PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.020e-39 Identity = 81/160 (50.62%), Postives = 110/160 (68.75%), Query Frame = 3 Query: 12 LVARCEVQSVVD-VNNQRSFLTLNALNEFDSKYSG-VDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 485 LV R E+ V+ + N+ LT+ A NE+DS SG VDWR KL+ Q+GAV+ATE+KNN+ K+AKWT Q+LLA +D MKLGYVSR + R NH IL KP +FA+ I L+ N WGI++ ++D CMK GKY+L+KDP P +R+Y +P FE++ Sbjct: 398 LVCRTELDGVIHGLGNETQTLTIKAFNEWDSTQSGGVDWRTKLDVQKGAVMATEIKNNSAKVAKWTLQALLAGSDTMKLGYVSRNNARSTQNHSILLTQYVKPTEFASNIALNMDNCWGILRCVIDSCMKQKPGKYLLMKDPQSPVIRLYSLPEGTFESE 557
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_CAEBR (Eukaryotic translation initiation factor 3 subunit D OS=Caenorhabditis briggsae GN=eif-3.D PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 5.064e-39 Identity = 79/160 (49.38%), Postives = 110/160 (68.75%), Query Frame = 3 Query: 12 LVARCEVQSVVD-VNNQRSFLTLNALNEFDSKYSG-VDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 485 LV R E+ V+ + N+ LT+ A NE+DS +G VDWR KL+ Q+GAV+ATE+KNN+ K+AKWT Q+LLA +D MKLGYVSR + R NH IL KP +FA+ I L+ N WGI++ ++D CMK GKY+L+KDP P +R+Y +P F+++ Sbjct: 402 LVCRTELDGVIHGLGNETQTLTIKAFNEWDSSQAGGVDWRTKLDVQKGAVMATEIKNNSAKVAKWTLQALLAGSDTMKLGYVSRNNARSTQNHSILNTQYVKPTEFASNIALNMDNCWGILRCVIDSCMKQKPGKYLLMKDPQSPVIRLYSLPEGTFDSE 561
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_USTMA (Eukaryotic translation initiation factor 3 subunit D OS=Ustilago maydis GN=UM01321 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 7.312e-38 Identity = 79/164 (48.17%), Postives = 115/164 (70.12%), Query Frame = 3 Query: 12 LVARCEVQS-VVDVNNQRSFLTLNALNEFDSKYSG----VDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPD-AFEND 485 LV R EV + V + ++ +T+ +LNEFD++ G +DWR KL++QRGAV+ATE+KNN+ KLA++ QSLLA AD MKLGY+SR +P+D H+IL KP++ A Q+ ++ +N WGIV+++ DL K +GKYVL+KDP+K +R+Y VP + END Sbjct: 406 LVVRTEVDAYTVGASKEKQLITIKSLNEFDARAQGAGGALDWRLKLDSQRGAVVATEMKNNSFKLARFAVQSLLAGADSMKLGYISRANPKDTSRHMILGTSWLKPRELAAQMAVNLSNGWGIVRTVADLARKAEQGKYVLLKDPNKQTIRMYRVPANFGEEND 569
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_DICDI (Eukaryotic translation initiation factor 3 subunit D OS=Dictyostelium discoideum GN=eif3d PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 8.366e-34 Identity = 70/161 (43.48%), Postives = 104/161 (64.60%), Query Frame = 3 Query: 3 DMYLVARCEVQSVVD--VNNQRSFLTLNALNEFDSKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFE 479 D+ ++AR E+ VV+ F+++ A+NE DS G+++R+KL++QR A+LATE+KNN+ K AKW+ QS LA +++ LG+VSR RD+ NHVIL Y D Q + N WGI+K I CMKL GKY+L +DP++ + +Y VP +AF+ Sbjct: 343 DIVVLARTEIDGVVEGLPGQPPKFISIKAINEHDSNRFGIEFRKKLDSQRAAILATEIKNNSTKFAKWSIQSTLAGCEMLNLGFVSRDSIRDNNNHVILGTQFYPVADLNKQNGVDMKNCWGILKHIAQTCMKLANGKYLLHRDPNRNVINLYSVPENAFD 503
BLAST of FC878702 vs. ExPASy Swiss-Prot
Match: EIF3D_YARLI (Eukaryotic translation initiation factor 3 subunit D OS=Yarrowia lipolytica GN=YALI0F14839g PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.023e-31 Identity = 67/149 (44.97%), Postives = 98/149 (65.77%), Query Frame = 3 Query: 12 LVARCEVQSVVDVNNQRSFLTLNALNEFDSKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYE 458 L+ R EV ++ + L L LNE+ S +W+ K T RGA++A ELK+N NK+++WT QS+L D MK+G+ SRV P+D+ H I+ V+ +PK FA QIN++ N WGI KS+V++ ++GKYVLVKDP+ P V+IY+ Sbjct: 386 LILRTEVDAL---GPDGTTLNLRVLNEYGSS----EWKNKFNTGRGAIIAAELKHNLNKISRWTVQSILGDVDQMKIGFASRVSPKDNTQHNIIGVVSREPKQFAEQINVNLNNGWGIFKSVVNIATAKDDGKYVLVKDPNNPAVKIYK 527 The following BLAST results are available for this feature:
BLAST of FC878702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878702 ID=FC878702; Name=FC878702; organism=Citrus clementina; type=EST; length=911bpback to top |