FC878726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878726 vs. ExPASy Swiss-Prot
Match: OXAA1_BACSU (Membrane protein oxaA 1 OS=Bacillus subtilis GN=oxaA1 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 4.216e-17 Identity = 45/130 (34.62%), Postives = 79/130 (60.77%), Query Frame = 3 Query: 408 ISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAG----NQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFW 785 +SE + +V K+ D +YG +IIL+T+++++ PL KQ+ S+ AMQ LQP+++ ++++Y+ Q+++Q ET L+++ GVNPLAGC P L +P+ IG Y A+ + + + F W Sbjct: 46 LSELITYVAKLTGD---------NYGLSIILVTILIRLLILPLMIKQLRSSKAMQALQPEMQKLKEKYSSKDQKTQQKLQQETMALFQKHGVNPLAGCFPILIQMPILIGFYHAI--MRTQAISEHSFLW 164
BLAST of FC878726 vs. ExPASy Swiss-Prot
Match: OXAA_STRAW (Membrane protein oxaA OS=Streptomyces avermitilis GN=oxaA PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.506e-17 Identity = 37/93 (39.78%), Postives = 64/93 (68.82%), Query Frame = 3 Query: 474 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 752 +++G +I+ L +++++ PL KQ+++T AMQ LQP++K IQ+RY +++R E +LY+++G NPL+ CLP LA P + LY L+ +A Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDKQRQSEEMMKLYKESGTNPLSSCLPILAQSPFFFALYHVLNGIA 128
BLAST of FC878726 vs. ExPASy Swiss-Prot
Match: OXAA_PROA2 (Inner membrane protein oxaA OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=oxaA PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.506e-17 Identity = 42/113 (37.17%), Postives = 64/113 (56.64%), Query Frame = 3 Query: 477 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 815 +YG II+ ++K+ T+PLT +S M LQP +K IQ++Y N ++Q E R+Y++AGVNPL GCLP + +P+ ++ + L GF W LS P +I Sbjct: 361 NYGLIIIIFAFLIKLVTYPLTMASTKSMKKMSALQPMMKEIQEKYKDNPAKLQSELGRIYKEAGVNPLGGCLPVVLQMPLLFAMFYVFRSSIQ--LRQHGFLWANDLSVPDSI 471
BLAST of FC878726 vs. ExPASy Swiss-Prot
Match: OXAA_MANSM (Inner membrane protein oxaA OS=Mannheimia succiniciproducens (strain MBEL55E) GN=oxaA PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.506e-17 Identity = 48/136 (35.29%), Postives = 80/136 (58.82%), Query Frame = 3 Query: 393 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLS 800 GW FI++ + ++L +++ + ++G AII +T++VK +PLTK Q S M+ LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY A E F WI LS Sbjct: 326 GWAWFIAKPLFWLLNVIQSIVS------NWGLAIIGVTIVVKGILYPLTKAQYTSMAKMRMLQPKLQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPLLIQMPIFIALYWTFME-AVELRHAPFFGWIQDLS 454
BLAST of FC878726 vs. ExPASy Swiss-Prot
Match: OXAA_BORHD (Inner membrane protein oxaA OS=Borrelia hermsii (strain DAH) GN=oxaA PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.506e-17 Identity = 46/129 (35.66%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 405 FISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIP 791 FI M+ +++I + I ++G +I+ LT++V++ FPLT K +T + LQPK+K IQ ++ + +R+ E +LYR+ GVNPL GC P L +PV+ LY + N L G +IP Sbjct: 322 FIQVPMQLIMQIFYNVIP------NWGLSIMFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQVKFKNDPKRLNEEMGKLYREEGVNPLGGCFPILLQLPVFFALY----GLVNNFFLLRGASFIP 440
BLAST of FC878726 vs. ExPASy Swiss-Prot
Match: OXAA_ALISL (Inner membrane protein oxaA OS=Aliivibrio salmonicida (strain LFI1238) GN=oxaA PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.506e-17 Identity = 51/137 (37.23%), Postives = 80/137 (58.39%), Query Frame = 3 Query: 393 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF-WIPSLS 800 GW FI+ + +L ++ + ++G AI++LT IV+ A +PLTK Q S M+ LQPK+ A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL + + L FF WI LS Sbjct: 329 GWLWFIASPLHKLLSFIQSIVG------NWGLAIMILTFIVRGAMYPLTKAQYTSMAKMRMLQPKLAAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPIVLQMPIFISLYWAL--MESVELRHAPFFGWITDLS 457
BLAST of FC878726 vs. ExPASy Swiss-Prot
Match: OXAA_GEOSL (Inner membrane protein oxaA OS=Geobacter sulfurreducens GN=oxaA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.191e-17 Identity = 45/118 (38.14%), Postives = 69/118 (58.47%), Query Frame = 3 Query: 387 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 740 N GWF +++ + LK + +YG AII++TVI+KV +PLT +S MQ LQPK++ ++++Y ++E + LY+ VNP+ GCLP L IPV+ LY+AL Sbjct: 320 NLGWFAMLAKPLLHSLKFFHNYTG------NYGIAIIIITVIIKVIFYPLTHSSYKSMKEMQKLQPKMQQLREKYKNDREAMNRAMMELYQTHKVNPVGGCLPMLVQIPVFFALYKAL 431
BLAST of FC878726 vs. ExPASy Swiss-Prot
Match: OXAA_CHLTE (Inner membrane protein oxaA OS=Chlorobium tepidum GN=oxaA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.191e-17 Identity = 40/113 (35.40%), Postives = 66/113 (58.41%), Query Frame = 3 Query: 477 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 815 +YG II+ ++K+ T+PL+ +S M LQP +K +Q++Y N ++Q E R+Y++AGVNPL GCLPT+ +P+ ++ + L GF W+ LS P ++ Sbjct: 366 NYGLIIIIFAFLIKLVTWPLSLASTKSMKKMSALQPVMKELQEKYKDNPAKLQSELGRIYKEAGVNPLGGCLPTVIQMPLLFAMFYVFRSSIQ--LRQHGFLWVKDLSVPDSV 476
BLAST of FC878726 vs. ExPASy Swiss-Prot
Match: OXAA_BORDL (Inner membrane protein oxaA OS=Borrelia duttonii (strain Ly) GN=oxaA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.191e-17 Identity = 41/114 (35.96%), Postives = 70/114 (61.40%), Query Frame = 3 Query: 405 FISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 746 F+ M+ +++I + I ++G +I+ LT++V++ FPLT K +T + LQPK+K IQ ++ + +R+ E S+LYR+ GVNP+ GC P L +PV+ LY ++N Sbjct: 322 FLQVPMQLIMQIFYNVIP------NWGLSIMFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQVKFKSDPKRLNEEMSKLYREEGVNPIGGCFPILLQLPVFFALYGLVNN 429
BLAST of FC878726 vs. ExPASy Swiss-Prot
Match: OXAA1_BACHD (Membrane protein oxaA 1 OS=Bacillus halodurans GN=oxaA1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.191e-17 Identity = 46/126 (36.51%), Postives = 77/126 (61.11%), Query Frame = 3 Query: 477 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAG----NQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFW----------IPSLSGPTT 812 S+G AII++T+++++ PL KQ++ST AMQ LQP+++A++++Y+ Q+++Q ET L+++ GVNPLAGC P L +P+ + Y A+ G E F W +P ++G TT Sbjct: 58 SFGLAIIVVTLLIRLLILPLMIKQLKSTRAMQALQPEMQALREKYSAKDQRTQQKLQQETMALFQKHGVNPLAGCFPVLIQMPILLAFYHAIMRTREIG--DEHFLWFVLNQPDPILLPIIAGITT 181 The following BLAST results are available for this feature:
BLAST of FC878726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 384
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878726 ID=FC878726; Name=FC878726; organism=Citrus clementina; type=EST; length=918bpback to top |