FC878759
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878759 vs. ExPASy Swiss-Prot
Match: CH60_DICT6 (60 kDa chaperonin OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=groL PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.380e-47 Identity = 96/163 (58.90%), Postives = 128/163 (78.53%), Query Frame = 3 Query: 306 DGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTSKALVSELKHMSQEVE-DSELADVAAVSACNNYEVGNMIAQAMSKVGR 791 D A L G++ +AD V +TLGPKGRNVVLE K+GAP I NDGVT+AKE++LEDP EN+GA+LV++ A+KTND+AGDGTTT+ VLAQ L+ EG+K V AGANP+ + RGIEK + +V ELK +++ VE ++A VAA+SA N+ E+GN+IA+AM KVG+ Sbjct: 9 DMQARTALIRGLDIVADTVKITLGPKGRNVVLEKKFGAPVITNDGVTIAKEIDLEDPFENMGAQLVKEVASKTNDVAGDGTTTATVLAQALVHEGMKHVVAGANPMYVRRGIEKAVEKVVEELKKIAKPVETKQDIAHVAAISANNDTEIGNLIAEAMDKVGK 171
BLAST of FC878759 vs. ExPASy Swiss-Prot
Match: CH60_ANATD (60 kDa chaperonin OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=groL PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.380e-47 Identity = 97/170 (57.06%), Postives = 135/170 (79.41%), Query Frame = 3 Query: 279 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTSKALVSELKHMSQEVEDSE-LADVAAVSACNNYEVGNMIAQAMSKV 785 AAK + F+++ A + L+ GVNKLAD V VTLGPKGRNVVLE K+G+P+IVNDGVT+AKE+ELEDP EN+GA++VR+ A+KTND+AGDGTTT+ VLAQ +I EG+K +AAGANP+++ +GI+K +V E++ MS++V E + VA++SA + E+G ++A AM KV Sbjct: 2 AAKMILFDEE--ARRALERGVNKLADTVKVTLGPKGRNVVLEKKFGSPQIVNDGVTIAKEIELEDPFENMGAQIVREVASKTNDIAGDGTTTATVLAQAMIREGLKNIAAGANPMILRKGIQKAVDVVVEEIRKMSKKVRGKEDITYVASISA-GDEEIGKLVADAMEKV 168
BLAST of FC878759 vs. ExPASy Swiss-Prot
Match: CH601_ANASL (60 kDa chaperonin 1 OS=Anabaena sp. (strain L31) GN=groL1 PE=1 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.380e-47 Identity = 97/171 (56.73%), Postives = 133/171 (77.78%), Query Frame = 3 Query: 282 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTSKALVSELKHMSQEVEDSE-LADVAAVSACNNYEVGNMIAQAMSKVGR 791 AK + +N++ A + L+ G++ LA+ V VTLGPKGRNVVLE KYGAP+IVNDGVT+AKE+ELED +EN G L+RQAA+KTND+AGDGTTT+ VLA ++ EG++ VAAGAN +L+ RGI+K + LV ++ ++ VEDS+ +A V A+SA N+ EV MIA+A+ KVG+ Sbjct: 2 AKRIIYNEN--ARRALERGIDILAEAVAVTLGPKGRNVVLEKKYGAPQIVNDGVTIAKEIELEDHIENTGVALIRQAASKTNDVAGDGTTTATVLAHAIVKEGLRNVAAGANAILLKRGIDKATNFLVDRIREHARSVEDSKAIAQVGAISAGNDDEVRQMIAEALDKVGK 170
BLAST of FC878759 vs. ExPASy Swiss-Prot
Match: CH60_HALOH (60 kDa chaperonin OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=groL PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.802e-47 Identity = 98/171 (57.31%), Postives = 133/171 (77.78%), Query Frame = 3 Query: 282 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTSKALVSELKHMSQEVEDSE-LADVAAVSACNNYEVGNMIAQAMSKVGR 791 AK+L F++D A + L+ GV+ LA+ V VTLGPKGRNVVLE +GAP I NDGV++A+E+ELE+ EN+GA+ V++ A KTND+AGDGTTT+ VLAQ + EG+K VAAGANP+++ RGIEK + LV E+K +S+ VE E ++ VAA+SA N+ EVG +IA+AM KVG+ Sbjct: 2 AKELKFSED--ARRALERGVDTLANAVKVTLGPKGRNVVLEKSFGAPTITNDGVSIAREIELENHYENMGAQTVKEVATKTNDVAGDGTTTATVLAQAIFKEGLKNVAAGANPMILKRGIEKAVQKLVEEIKELSKPVEGKEAVSQVAAISAGNDEEVGKLIAEAMEKVGQ 170
BLAST of FC878759 vs. ExPASy Swiss-Prot
Match: CH60_LISW6 (60 kDa chaperonin OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=groL PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.354e-47 Identity = 100/170 (58.82%), Postives = 131/170 (77.06%), Query Frame = 3 Query: 282 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTSKALVSELKHMSQEVEDSE-LADVAAVSACNNYEVGNMIAQAMSKVG 788 AKD+ F++D A + + GV++LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELEDP EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANPV + RGIEK + ELK +S+ +E E +A VAA+S+ + EVG +IA+AM +VG Sbjct: 2 AKDIKFSED--ARRAMLRGVDQLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVSEVASKTNDVAGDGTTTATVLAQAMIQEGLKNVTAGANPVGVRRGIEKAVATAIEELKAISKPIESKESIAQVAAISS-GDEEVGKLIAEAMERVG 168
BLAST of FC878759 vs. ExPASy Swiss-Prot
Match: CH60_LISMO (60 kDa chaperonin OS=Listeria monocytogenes GN=groL PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.354e-47 Identity = 100/170 (58.82%), Postives = 131/170 (77.06%), Query Frame = 3 Query: 282 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTSKALVSELKHMSQEVEDSE-LADVAAVSACNNYEVGNMIAQAMSKVG 788 AKD+ F++D A + + GV++LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELEDP EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANPV + RGIEK + ELK +S+ +E E +A VAA+S+ + EVG +IA+AM +VG Sbjct: 2 AKDIKFSED--ARRAMLRGVDQLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVSEVASKTNDVAGDGTTTATVLAQAMIQEGLKNVTAGANPVGVRRGIEKAVATAIEELKAISKPIESKESIAQVAAISS-GDEEVGKLIAEAMERVG 168
BLAST of FC878759 vs. ExPASy Swiss-Prot
Match: CH60_LISMH (60 kDa chaperonin OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=groL PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.354e-47 Identity = 100/170 (58.82%), Postives = 131/170 (77.06%), Query Frame = 3 Query: 282 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTSKALVSELKHMSQEVEDSE-LADVAAVSACNNYEVGNMIAQAMSKVG 788 AKD+ F++D A + + GV++LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELEDP EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANPV + RGIEK + ELK +S+ +E E +A VAA+S+ + EVG +IA+AM +VG Sbjct: 2 AKDIKFSED--ARRAMLRGVDQLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVSEVASKTNDVAGDGTTTATVLAQAMIQEGLKNVTAGANPVGVRRGIEKAVATAIEELKAISKPIESKESIAQVAAISS-GDEEVGKLIAEAMERVG 168
BLAST of FC878759 vs. ExPASy Swiss-Prot
Match: CH60_LISMF (60 kDa chaperonin OS=Listeria monocytogenes serotype 4b (strain F2365) GN=groL PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.354e-47 Identity = 100/170 (58.82%), Postives = 131/170 (77.06%), Query Frame = 3 Query: 282 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTSKALVSELKHMSQEVEDSE-LADVAAVSACNNYEVGNMIAQAMSKVG 788 AKD+ F++D A + + GV++LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELEDP EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANPV + RGIEK + ELK +S+ +E E +A VAA+S+ + EVG +IA+AM +VG Sbjct: 2 AKDIKFSED--ARRAMLRGVDQLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVSEVASKTNDVAGDGTTTATVLAQAMIQEGLKNVTAGANPVGVRRGIEKAVATAIEELKAISKPIESKESIAQVAAISS-GDEEVGKLIAEAMERVG 168
BLAST of FC878759 vs. ExPASy Swiss-Prot
Match: CH60_LISMC (60 kDa chaperonin OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=groL PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.354e-47 Identity = 100/170 (58.82%), Postives = 131/170 (77.06%), Query Frame = 3 Query: 282 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTSKALVSELKHMSQEVEDSE-LADVAAVSACNNYEVGNMIAQAMSKVG 788 AKD+ F++D A + + GV++LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELEDP EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANPV + RGIEK + ELK +S+ +E E +A VAA+S+ + EVG +IA+AM +VG Sbjct: 2 AKDIKFSED--ARRAMLRGVDQLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVSEVASKTNDVAGDGTTTATVLAQAMIQEGLKNVTAGANPVGVRRGIEKAVATAIEELKAISKPIESKESIAQVAAISS-GDEEVGKLIAEAMERVG 168
BLAST of FC878759 vs. ExPASy Swiss-Prot
Match: CH60_LISIN (60 kDa chaperonin OS=Listeria innocua GN=groL PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.354e-47 Identity = 100/170 (58.82%), Postives = 131/170 (77.06%), Query Frame = 3 Query: 282 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTSKALVSELKHMSQEVEDSE-LADVAAVSACNNYEVGNMIAQAMSKVG 788 AKD+ F++D A + + GV++LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELEDP EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANPV + RGIEK + ELK +S+ +E E +A VAA+S+ + EVG +IA+AM +VG Sbjct: 2 AKDIKFSED--ARRAMLRGVDQLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVSEVASKTNDVAGDGTTTATVLAQAMIQEGLKNVTAGANPVGVRRGIEKAVATAIEELKAISKPIESKESIAQVAAISS-GDEEVGKLIAEAMERVG 168 The following BLAST results are available for this feature:
BLAST of FC878759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878759 ID=FC878759; Name=FC878759; organism=Citrus clementina; type=EST; length=791bpback to top |