FC878761
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878761 vs. ExPASy Swiss-Prot
Match: HPPD_TETTH (4-hydroxyphenylpyruvate dioxygenase OS=Tetrahymena thermophila GN=TFA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.237e-20 Identity = 73/268 (27.24%), Postives = 118/268 (44.03%), Query Frame = 1 Query: 103 FHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD-LRFVFTAPYSPXXXXXXXXXXXXXXLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDN---LAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEP---TDEISSFPLDYGIRRLDHAVGNVPE--LAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGV 879 + H+ FW +A A ++ G A L TG+ A++++R+ + F+ PY + + HG + +A VED +N ++ GAK + PP L + IA V YG+V+ ++ D F+PGF D +++ D +DH VGN P+ + A + + FH F + T S L S+V+ + D+ + +P+NEP G KRKSQIQ Y++ G GV Sbjct: 29 YDHLHFWVGNAKQAAGWYTSRFGFEYYAYKGLETGSREVATHVVRNKQGVTLAFSTPYGNDKD---------------NQREMNQHQSLHGDGVKDVAFAVEDCHSIYNKAIQRGAKCAYPPQDLKDEHGSVTIAAVHTYGEVIHTFIQRNDYKGF--FMPGFVAHPLKDPLNNVLPDISYNYVDHIVGNQPDNMMTSAADWYEKTLDFHRFWSVDDSMIHTEFSSLRSIVMTDYDQKIKMPINEPADG-KRKSQIQEYIDFYAGPGV 278
BLAST of FC878761 vs. ExPASy Swiss-Prot
Match: HPPD_CAEBR (4-hydroxyphenylpyruvate dioxygenase OS=Caenorhabditis briggsae GN=hpd-1 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.955e-18 Identity = 80/276 (28.99%), Postives = 121/276 (43.84%), Query Frame = 1 Query: 103 FHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPXXXXXXXXXXXXXXLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILD-------NLAV-IAEVQLYGDV---VLRYVSYKDKANHLDFLPGFEPTDEISSFPLDY---GIRRLDHAVGNVPEL--APAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRK-SQIQTYLEHNEGAGV 879 F HV F +A A + G A L TG+ + A + ++ + FVF + P D+ HG + + EVED D + VAH AK + ++ D N +V A ++ YG+ +L YK FLPGF+P +F G+ LDH VGN P+L APAV + ++ FH F + T S L S+V+ N +E + +P+NEP K+ SQIQ ++++ G+GV Sbjct: 18 FDHVRFVVGNAKQAAYWYCANFGFEPFAYKGLETGSRITAQHAIKQDKIVFVFESALLP------------------DNTELGEHLVQHGDGVKDVCFEVEDLD----SIVAH-AKAAGATIVRDITEESDENGSVRFATLRTYGETDHTLLERKKYKGA-----FLPGFKPHPMPPTFFHSLPRVGLNFLDHCVGNQPDLQMAPAVEWYENILKFHRFWSVDDSMIHTEYSALRSIVVTNFEETIKMPINEPASSNKKAVSQIQEFVDYYGGSGV 265
BLAST of FC878761 vs. ExPASy Swiss-Prot
Match: HPPD2_ASPFU (Probable 4-hydroxyphenylpyruvate dioxygenase 2 OS=Aspergillus fumigatus GN=AFUA_4G10620 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.735e-17 Identity = 74/277 (26.71%), Postives = 123/277 (44.40%), Query Frame = 1 Query: 103 FHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPXXXXXXXXXXXXXXLPTFDHAACR------SFAASHGLAARSIAVEVE-DADVAFNTSVAHGAKPSSPPVILDN----LAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFE---PTDEISSFPLDYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGT--SESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGV 879 F H+ ++ +A A + +G +A TG+ S+++ +G FV T+P P A R + HG + +A +E D + + +V HGA P + P L + +A + Y D V ++ D + FLPG+E D I+ +DH VGN P + P V Y + FH + +T +D+ S + S+V+A+ +E++ +PMNEP G K+KSQI+ ++ + GAGV Sbjct: 23 FDHITWYVGNAKQAASYYVTRMGFKQIAYRGPETGSRSVVSHVISNGQAIFVLTSPIRSMAGTGAYDDD-----PDVTKADRRLLEEIHNHLIKHGDGVKDVAFRIEGDIEAVWKRAVDHGAAPVAAPTTLKDDRHGSITLATIGTYEDTVHSLINRHDYSG--PFLPGYEVVTDDDPINRLLPSIDFIEIDHCVGNQPWNGVDPIVKYYEDCLNFHRY--WTVDDLNMCGEYSAMRSIVVASPNEVIKMPMNEPAQG-KKKSQIEEFVNYYNGAGV 289
BLAST of FC878761 vs. ExPASy Swiss-Prot
Match: HPPD_CAEEL (4-hydroxyphenylpyruvate dioxygenase OS=Caenorhabditis elegans GN=hpd-1 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.365e-16 Identity = 74/274 (27.01%), Postives = 116/274 (42.34%), Query Frame = 1 Query: 103 FHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPXXXXXXXXXXXXXXLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVI--------LDNLAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFE----PTDEISSFPLDYGIRRLDHAVGNVPELA--PAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRK-SQIQTYLEHNEGAGV 879 F HV F +A A + G A L TG+ + A + +R + F+F + P D++ + HG + + EVED D + +AH AK + ++ D A ++ YG+ + K+ FLPGF+ P + P G+ LDH VGN P+L AV + + FH F + T S L S+V+ N +E + +P+NEP K+ SQIQ Y+++ G+GV Sbjct: 18 FDHVRFVVGNAKQAAYWYCANFGFEPFAYKGLETGSRITAQHAIRQDKIVFIFESALLP------------------DNSELGNHLVQHGDGVKDVCFEVEDLD----SIIAH-AKAAGATIVHDITEESDADGSIRYATLRTYGETDHTLLERKNYRGA--FLPGFKAHPMPATFFKTLPR-VGLNFLDHCVGNQPDLQMDSAVQWYEKVLKFHRFWSVDDSMIHTEYSALRSIVVTNFEETIKMPINEPATSDKKAISQIQEYVDYYGGSGV 265 The following BLAST results are available for this feature:
BLAST of FC878761 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878761 ID=FC878761; Name=FC878761; organism=Citrus clementina; type=EST; length=879bpback to top |