FC878770
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878770 vs. ExPASy Swiss-Prot
Match: MYB4_ARATH (Transcription repressor MYB4 OS=Arabidopsis thaliana GN=MYB4 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 7.158e-33 Identity = 64/112 (57.14%), Postives = 79/112 (70.54%), Query Frame = 2 Query: 101 RGPWTLEEDTLLIQYISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLKIDANS 436 +G WT EED L+ YI H EG W L K +GL R GKSCRLRW+NYL+PD+KRGN T +E I++LHS GN+WS IA LPGRTDNEIKNYW T ++++ + ID S Sbjct: 14 KGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLINRGIDPTS 125
BLAST of FC878770 vs. ExPASy Swiss-Prot
Match: MYB2_PHYPA (Myb-related protein Pp2 OS=Physcomitrella patens GN=PP2 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 7.158e-33 Identity = 64/114 (56.14%), Postives = 82/114 (71.93%), Query Frame = 2 Query: 95 LRRGPWTLEEDTLLIQYISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLKIDANS 436 LRRGPWT EED L+ +I+ + W + K +GL R GKSCRLRW NYL+PD+KRG + E+ IL+LH+ GNRWS+IA LPGRTDNEIKNYW TR++K+ R +D N+ Sbjct: 12 LRRGPWTSEEDQKLVSHITNNGLSCWRAIPKLAGLLRCGKSCRLRWTNYLRPDLKRGIFSEAEENLILDLHATLGNRWSRIAAQLPGRTDNEIKNYWNTRLKKRLRSQGLDPNT 125
BLAST of FC878770 vs. ExPASy Swiss-Prot
Match: MYB82_ARATH (Transcription factor MYB82 OS=Arabidopsis thaliana GN=MYB82 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 9.349e-33 Identity = 61/110 (55.45%), Postives = 79/110 (71.82%), Query Frame = 2 Query: 77 ENDSDQLRRGPWTLEEDTLLIQYISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQ 406 E ++RG W EED +L Y+ H EG W +++RSGLKR GKSCRLRW NYL+P++KRG+++PQEQ I+ +H GNRWS IA LPGRTDNE+KNYW T + K+ Sbjct: 6 EEGKSYVKRGLWKPEEDMILKSYVETHGEGNWADISRRSGLKRGGKSCRLRWKNYLRPNIKRGSMSPQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKK 115
BLAST of FC878770 vs. ExPASy Swiss-Prot
Match: MYB86_ARATH (Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.221e-32 Identity = 65/122 (53.28%), Postives = 89/122 (72.95%), Query Frame = 2 Query: 92 QLRRGPWTLEEDTLLIQYISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLKIDANSTTFQEII 457 +LR+G W+ EED L+ YI+RH G W+ + K +GL+R GKSCRLRW+NYL+PD+KRG + E+ I+ELH+ GNRWS+IA LPGRTDNEIKN+W + ++K+ R ID TT + +I Sbjct: 11 KLRKGLWSPEEDEKLLNYITRHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFWNSCLKKKLRRKGID--PTTHKPLI 130
BLAST of FC878770 vs. ExPASy Swiss-Prot
Match: MYB6_ARATH (Transcription repressor MYB6 OS=Arabidopsis thaliana GN=MYB6 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.595e-32 Identity = 64/127 (50.39%), Postives = 83/127 (65.35%), Query Frame = 2 Query: 101 RGPWTLEEDTLLIQYISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQ--------ARHLKIDANSTTFQEII 457 +G WT EED L+ YI H EG W L K +GL R GKSCRLRW+NYL+PD+KRGN T E I++LHS GN+WS IA LPGRTDNEIKNYW T ++++ H +I+ + T +++ Sbjct: 14 KGAWTKEEDQRLVDYIRNHGEGCWRSLPKSAGLLRCGKSCRLRWINYLRPDLKRGNFTDDEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSHGIDPQTHRQINESKTVSSQVV 140
BLAST of FC878770 vs. ExPASy Swiss-Prot
Match: MYB39_ARATH (Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.083e-32 Identity = 62/116 (53.45%), Postives = 83/116 (71.55%), Query Frame = 2 Query: 83 DSDQ-LRRGPWTLEEDTLLIQYISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLKID 427 D D+ +++GPW EED L YI+ + G W L K +GL R GKSCRLRW+NYL+PD++RG + E+ +I+ LH+ GN+WSKIA HLPGRTDNEIKNYW T ++K+ + ID Sbjct: 8 DQDKGVKKGPWLPEEDDKLTAYINENGYGNWRSLPKLAGLNRCGKSCRLRWMNYLRPDIRRGKFSDGEESTIVRLHALLGNKWSKIAGHLPGRTDNEIKNYWNTHMRKKLLQMGID 123
BLAST of FC878770 vs. ExPASy Swiss-Prot
Match: MYB38_MAIZE (Myb-related protein Zm38 OS=Zea mays PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.720e-32 Identity = 65/109 (59.63%), Postives = 76/109 (69.72%), Query Frame = 2 Query: 101 RGPWTLEEDTLLIQYISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLKID 427 RG WT EED L+ YI H EG W L K +GL R GKSCRLRW+NYL+PD+KRGN T E I++LHS GN+WS IA LPGRTDNEIKNYW T V+++ ID Sbjct: 14 RGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGID 122
BLAST of FC878770 vs. ExPASy Swiss-Prot
Match: MYB08_ANTMA (Myb-related protein 308 OS=Antirrhinum majus GN=MYB308 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.720e-32 Identity = 63/109 (57.80%), Postives = 77/109 (70.64%), Query Frame = 2 Query: 101 RGPWTLEEDTLLIQYISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLKID 427 +G WT EED L+ YI H EG W L K +GL R GKSCRLRW+NYL+PD+KRGN T +E I++LHS GN+WS IA LPGRTDNEIKNYW T ++++ ID Sbjct: 14 KGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRGID 122
BLAST of FC878770 vs. ExPASy Swiss-Prot
Match: ODO1_PETHY (Protein ODORANT1 OS=Petunia hybrida GN=ODO1 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.552e-32 Identity = 61/111 (54.95%), Postives = 82/111 (73.87%), Query Frame = 2 Query: 95 LRRGPWTLEEDTLLIQYISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLKID 427 +++GPWT EED LI +I + + W + K +GLKR GKSCRLRW NYL+PD+KRG L+ E+ +++LHS+ GNRWSKIA LPGRTDNEIKN+W T ++K+ + ID Sbjct: 12 VKKGPWTAEEDKKLISFILTNGQCCWRAVPKLAGLKRCGKSCRLRWTNYLRPDLKRGLLSDAEEKLVIDLHSRLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMGID 122
BLAST of FC878770 vs. ExPASy Swiss-Prot
Match: MYB30_ANTMA (Myb-related protein 330 OS=Antirrhinum majus GN=MYB330 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.552e-32 Identity = 64/109 (58.72%), Postives = 77/109 (70.64%), Query Frame = 2 Query: 101 RGPWTLEEDTLLIQYISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLKID 427 +G WT EED LI YI H EG W L K +GL R GKSCRLRW+NYL+PD+KRGN T +E I++LHS GN+WS IA LPGRTDNEIKNYW T ++++ ID Sbjct: 14 KGAWTKEEDQRLINYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDEIIIKLHSLLGNKWSLIAGALPGRTDNEIKNYWNTHIKRKLVSRGID 122 The following BLAST results are available for this feature:
BLAST of FC878770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878770 ID=FC878770; Name=FC878770; organism=Citrus clementina; type=EST; length=918bpback to top |