FC878906
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878906 vs. ExPASy Swiss-Prot
Match: TLP_WHEAT (Thaumatin-like protein PWIR2 OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.371e-21 Identity = 61/133 (45.86%), Postives = 80/133 (60.15%), Query Frame = 1 Query: 154 FTITNECSNTIWPGILSGAGTPQLSPTGFSLEAGQSTSISVPA-SWSGRLWARTHCT-QDSKFTCLTGDCGSGTLECSGSGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMLVTPQTQSGTAGNCTAAGC 546 F I N C TIWP + G GF+L +GQ++SI+VPA + +GR+WART C+ +C TGDCG G L CS SG PPATLAE+T+ G DF+D+S++DG+NL M + T G A C C Sbjct: 23 FNIKNNCGFTIWPAGIPVGG-------GFALGSGQTSSINVPAGTQAGRIWARTGCSFNGGSGSCQTGDCG-GQLSCSLSGR-PPATLAEYTIGGGSTQDFYDISVIDGFNLAMDFSCST--GDALQCRDPSC 144
BLAST of FC878906 vs. ExPASy Swiss-Prot
Match: RST3_AVESA (Thaumatin-like pathogenesis-related protein 3 OS=Avena sativa GN=RASTL-3 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20 Identity = 59/133 (44.36%), Postives = 81/133 (60.90%), Query Frame = 1 Query: 154 FTITNECSNTIWPGILSGAGTPQLSPTGFSLEAGQSTSISVPASWS-GRLWARTHCT-QDSKFTCLTGDCGSGTLECSGSGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMLVTPQTQSGTAGNCTAAGC 546 F ITN C T+WP + G GF L + QS++I+VPA S GR+W RT C+ + + +C TGDC +G L C+ SG PATLAE+T+ G+ DF+D+S++DGYNL M + T G A C +GC Sbjct: 24 FRITNNCGFTVWPAGIPVGG-------GFQLNSKQSSNINVPAGTSAGRIWGRTGCSFNNGRGSCATGDC-AGALSCTLSGQ--PATLAEYTIGGSQ--DFYDISVIDGYNLAMDFSCST--GVALKCRDSGC 142
BLAST of FC878906 vs. ExPASy Swiss-Prot
Match: RST2_AVESA (Thaumatin-like pathogenesis-related protein 2 OS=Avena sativa GN=RASTL-2 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.523e-20 Identity = 59/133 (44.36%), Postives = 80/133 (60.15%), Query Frame = 1 Query: 154 FTITNECSNTIWPGILSGAGTPQLSPTGFSLEAGQSTSISVPASWS-GRLWARTHCT-QDSKFTCLTGDCGSGTLECSGSGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMLVTPQTQSGTAGNCTAAGC 546 F ITN C T+WP + G GF L + QS++I+VPA S GR+W RT C+ + + +C TGDC +G L C+ SG PATLAE+T+ G+ DF+D+S++DGYNL M + T G A C A C Sbjct: 24 FRITNNCGFTVWPAGIPVGG-------GFQLNSKQSSNINVPAGTSAGRIWGRTGCSFNNGRGSCATGDC-AGALSCTLSGQ--PATLAEYTIGGSQ--DFYDISVIDGYNLAMDFSCST--GVALKCRDANC 142
BLAST of FC878906 vs. ExPASy Swiss-Prot
Match: TLP_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os12g0628600 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.825e-20 Identity = 60/134 (44.78%), Postives = 80/134 (59.70%), Query Frame = 1 Query: 154 FTITNECSNTIWPGILSGAGTPQLSPTGFSLEAGQSTSISVPA-SWSGRLWARTHCTQD--SKFTCLTGDCGSGTLECSGSGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMLVTPQTQSGTAGNCTAAGC 546 FTITN CS T+WP G QLSP GQ+ +I+VPA + SGR+W RT C+ D + +C TGDC +G L C+ SG P TLAEFT+ G+ DF+D+S++DGYN+ M + SG C + C Sbjct: 29 FTITNRCSFTVWPAATPVGGGVQLSP-------GQTWTINVPAGTSSGRVWGRTGCSFDGSGRGSCATGDC-AGALSCTLSG-QKPLTLAEFTIGGS--QDFYDLSVIDGYNVAMSFS--CSSGVTVTCRDSRC 149
BLAST of FC878906 vs. ExPASy Swiss-Prot
Match: RST1_AVESA (Thaumatin-like pathogenesis-related protein 1 OS=Avena sativa GN=RASTL-1 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.189e-19 Identity = 58/133 (43.61%), Postives = 80/133 (60.15%), Query Frame = 1 Query: 154 FTITNECSNTIWPGILSGAGTPQLSPTGFSLEAGQSTSISVPASWS-GRLWARTHCT-QDSKFTCLTGDCGSGTLECSGSGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMLVTPQTQSGTAGNCTAAGC 546 F ITN C T+WP + G GF L + QS++I+VPA S GR+W RT C+ + + +C TGDC +G L C+ SG PATLAE+T+ G+ DF+D+S++DG+NL M + T G A C A C Sbjct: 24 FRITNNCGFTVWPAGIPVGG-------GFQLNSKQSSNINVPAGTSAGRIWGRTGCSFNNGRGSCATGDC-AGALSCTLSGQ--PATLAEYTIGGSQ--DFYDISVIDGFNLAMDFSCST--GVALKCRDANC 142
BLAST of FC878906 vs. ExPASy Swiss-Prot
Match: RST4_AVESA (Thaumatin-like pathogenesis-related protein 4 OS=Avena sativa GN=RASTL-4 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.495e-17 Identity = 55/133 (41.35%), Postives = 76/133 (57.14%), Query Frame = 1 Query: 154 FTITNECSNTIWPGILSGAGTPQLSPTGFSLEAGQSTSISVPASW-SGRLWARTHCT-QDSKFTCLTGDCGSGTLECSGSGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMLVTPQTQSGTAGNCTAAGC 546 FTITN C T+WP + G G L+ GQ+ +++VPA SGR+W RT C+ +C TGDC +G L C+ SG PATLAEF++ G D++D+S++D YNL M + T G A C + C Sbjct: 24 FTITNNCGYTVWPAAIPVGG-------GQQLDQGQTWTLNVPAGTNSGRIWGRTGCSFNGGSGSCQTGDC-AGALSCTLSG--QPATLAEFSIGGEH--DYYDISVIDVYNLAMDFSCST--GDALQCRDSSC 142 The following BLAST results are available for this feature:
BLAST of FC878906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878906 ID=FC878906; Name=FC878906; organism=Citrus clementina; type=EST; length=814bpback to top |