FC878917

Overview
NameFC878917
Unique NameFC878917
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length638
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878917 vs. ExPASy Swiss-Prot
Match: ACEA_YARLI (Isocitrate lyase OS=Yarrowia lipolytica GN=ICL1 PE=3 SV=3)

HSP 1 Score: 224.557 bits (571), Expect = 3.459e-58
Identity = 112/203 (55.17%), Postives = 142/203 (69.95%), Query Frame = 2
Query:   29 MSEQELQAYRAEVEAVKEWWKNPRFSRVKRTYTAEEVVNKRGTLPIAYPSNAMAKKMWALLESKARGEGGGCSMTYGALDPVQLTQMAKYLETVYVXXXXXXXXXXXXLEPGPDLADYPSNTVPLKVAQLFTAQLFHDRKQRFTRLTTPKEQRAGLGKPVDYLRPIVADADTGHGGLTAVMKLAKMMVEAGAAGIHIEDQAPG 637
            MSEQ  Q +  EVE +K+WW +PR+   KR Y+ E++ ++RGT+ +   S+  A K++ LL+   +      S TYGALDPVQ+TQMAKYL+++YV             EP PDLADYP +TVP KV  L+ AQLFHDRKQ   RL+ P+ +R+ L  PVDYLRPI+ADADTGHGGLTAV+KL KM +E GAAGIHIEDQAPG
Sbjct:    1 MSEQ--QRFNNEVEEIKKWWSSPRWKHTKRVYSPEDIASRRGTIKVPQASSQQADKLFKLLQEHEKNHTA--SFTYGALDPVQVTQMAKYLDSIYVSGWQSSSTASTSNEPSPDLADYPMDTVPNKVEHLWFAQLFHDRKQNEERLSLPESERSKLPAPVDYLRPIIADADTGHGGLTAVVKLTKMFIERGAAGIHIEDQAPG 199          
BLAST of FC878917 vs. ExPASy Swiss-Prot
Match: ACEA_PICJA (Isocitrate lyase OS=Pichia jadinii GN=ICL1 PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.479e-56
Identity = 113/207 (54.59%), Postives = 142/207 (68.60%), Query Frame = 2
Query:   17 PSNIMSEQELQAYRAEVEAVKEWWKNPRFSRVKRTYTAEEVVNKRGTLPIAYPSNAMAKKMWALLESKARGEGGGCSMTYGALDPVQLTQMAKYLETVYVXXXXXXXXXXXXLEPGPDLADYPSNTVPLKVAQLFTAQLFHDRKQRFTRLTTPKEQRAGLGKPVDYLRPIVADADTGHGGLTAVMKLAKMMVEAGAAGIHIEDQAPG 637
            P +I +EQE  A+  EV AV++WWK PR+ +  R YTA+++V KRGTL I YPS+  AKK++ LLE   R +    S T+GALDP+ +TQMAKYL+TVY+             EP PDLADYP +TVP K   L+ AQLFHDRKQ   R     E+RA      D+LRPI+ADADTGHGG+TA++KL K+ +E GAAGIHIEDQAPG
Sbjct:    5 PIDIKAEQE--AFEREVAAVEQWWKEPRWRKTTRIYTAKDIVQKRGTLQIHYPSSDQAKKLYKLLEEHDRNKTA--SFTFGALDPIHVTQMAKYLDTVYISGWQSSSTASTSNEPSPDLADYPYDTVPNKCEHLWFAQLFHDRKQHEERFRMTPEERAKT-PYTDFLRPIIADADTGHGGITAIIKLTKLFIERGAAGIHIEDQAPG 206          
BLAST of FC878917 vs. ExPASy Swiss-Prot
Match: ACEA_DEBHA (Isocitrate lyase OS=Debaryomyces hansenii GN=ICL1 PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.607e-55
Identity = 106/200 (53.00%), Postives = 142/200 (71.00%), Query Frame = 2
Query:   38 QELQAYRAEVEAVKEWWKNPRFSRVKRTYTAEEVVNKRGTLPIAYPSNAMAKKMWALLESKARGEGGGCSMTYGALDPVQLTQMAKYLETVYVXXXXXXXXXXXXLEPGPDLADYPSNTVPLKVAQLFTAQLFHDRKQRFTRLTTPKEQRAGLGKPVDYLRPIVADADTGHGGLTAVMKLAKMMVEAGAAGIHIEDQAPG 637
            +E + ++ +V+ +++WWK PR+++ KR Y AE++  KR +L + YPS+  AKK++ LL+   + +    S T+GALDPVQ+TQMAKYL+++YV             EP PDLADYP +TVP KV  L+ AQLFHDRKQR  RL   KE+RA      D+LRPI+ADADTGHGG+TA++KL K+ VE GAAGIHIEDQAPG
Sbjct:   10 EEEKFFQDQVKEIQQWWKEPRWAKTKRIYQAEDIAKKRSSLKVDYPSSNQAKKLYKLLQEHDKNKSA--SFTFGALDPVQVTQMAKYLDSIYVSGWQCSSTASTSNEPSPDLADYPMDTVPNKVEHLWFAQLFHDRKQREERLNLSKEERAKT-PYTDFLRPIIADADTGHGGITAILKLTKLFVERGAAGIHIEDQAPG 206          
BLAST of FC878917 vs. ExPASy Swiss-Prot
Match: ACEA_ASHGO (Isocitrate lyase OS=Ashbya gossypii GN=ICL1 PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.607e-55
Identity = 113/198 (57.07%), Postives = 136/198 (68.69%), Query Frame = 2
Query:   47 QAYRAEVEAVKEWWKNPRFSRVKRTYTAEEVVNKRGTLPIA-YPSNAMAKKMWALLESKAR-GEGGGCSMTYGALDPVQLTQMAKYLETVYVXXXXXXXXXXXXLEPGPDLADYPSNTVPLKVAQLFTAQLFHDRKQRFTRLT-TPKEQRAGLGKPVDYLRPIVADADTGHGGLTAVMKLAKMMVEAGAAGIHIEDQA 631
            Q   AE E ++ WW  PR++  KR YTAE++V +RGT P+  YPS+ MA K   L+E+ AR    G  S T+G LDPVQ+TQM KYL+T+YV             EPGPDLADYP +TVP KV  LF AQLFHDRKQR  RL+ T + +   LG  +DYLRPIVADADTGHGGLTAV KL KM +E GAAGIH+EDQ+
Sbjct:   17 QQAAAEAEDIRRWWSQPRWAGTKRVYTAEDIVKRRGTFPVVEYPSSVMADK---LVETLARHSRNGTVSQTFGVLDPVQMTQMVKYLDTIYVSGWQCSATASTSNEPGPDLADYPMDTVPNKVEHLFMAQLFHDRKQREARLSCTTQRELDQLGPEIDYLRPIVADADTGHGGLTAVFKLTKMFIERGAAGIHMEDQS 211          
BLAST of FC878917 vs. ExPASy Swiss-Prot
Match: ACEA_CANTR (Isocitrate lyase OS=Candida tropicalis GN=ICL1 PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.741e-55
Identity = 107/200 (53.50%), Postives = 138/200 (69.00%), Query Frame = 2
Query:   38 QELQAYRAEVEAVKEWWKNPRFSRVKRTYTAEEVVNKRGTLPIAYPSNAMAKKMWALLESKARGEGGGCSMTYGALDPVQLTQMAKYLETVYVXXXXXXXXXXXXLEPGPDLADYPSNTVPLKVAQLFTAQLFHDRKQRFTRLTTPKEQRAGLGKPVDYLRPIVADADTGHGGLTAVMKLAKMMVEAGAAGIHIEDQAPG 637
            QE   ++ EV  +K+WW  PR+ + KR Y+AE++  KRGTL IAYPS+  + K++ LLE     +    S T+GALDP+ + QMAKYL+++YV             EP PDLADYP +TVP KV  L+ AQLFHDRKQR  RL   KE+RA     +D+LRPI+ADADTGHGG+TA++KL K+ +E GAAGIHIEDQAPG
Sbjct:   10 QEEADFQKEVAEIKKWWSEPRWRKTKRIYSAEDIAKKRGTLKIAYPSSQQSDKLFKLLEKHDAEKS--VSFTFGALDPIHVAQMAKYLDSIYVSGWQCSSTASTSNEPSPDLADYPMDTVPNKVEHLWFAQLFHDRKQREERLNMTKEERANT-PYIDFLRPIIADADTGHGGITAIIKLTKLFIERGAAGIHIEDQAPG 206          
BLAST of FC878917 vs. ExPASy Swiss-Prot
Match: ACEA_CANAL (Isocitrate lyase OS=Candida albicans GN=ICL1 PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 7.975e-55
Identity = 107/201 (53.23%), Postives = 140/201 (69.65%), Query Frame = 2
Query:   35 EQELQAYRAEVEAVKEWWKNPRFSRVKRTYTAEEVVNKRGTLPIAYPSNAMAKKMWALLESKARGEGGGCSMTYGALDPVQLTQMAKYLETVYVXXXXXXXXXXXXLEPGPDLADYPSNTVPLKVAQLFTAQLFHDRKQRFTRLTTPKEQRAGLGKPVDYLRPIVADADTGHGGLTAVMKLAKMMVEAGAAGIHIEDQAPG 637
            ++E   ++ EV  +K+WW  PR+ + KR Y+AE++  KRGTL I +PS+  A K++ LLE+    +    S T+GALDP+ + QMAKYL+++YV             EP PDLADYP +TVP KV  L+ AQLFHDRKQR  RLT  KE+RA     +D+LRPI+ADADTGHGG+TA++KL KM +E GAAGIHIEDQAPG
Sbjct:    9 QKEEADFQKEVAEIKKWWSEPRWRKTKRIYSAEDIAKKRGTLKINHPSSQQADKLFKLLETHDADKT--VSFTFGALDPIHVAQMAKYLDSIYVSGWQCSSTASTSNEPSPDLADYPMDTVPNKVEHLWFAQLFHDRKQREERLTLSKEERAKT-PYIDFLRPIIADADTGHGGITAIIKLTKMFIERGAAGIHIEDQAPG 206          
BLAST of FC878917 vs. ExPASy Swiss-Prot
Match: ACEA_DENCR (Isocitrate lyase OS=Dendrobium crumenatum GN=ICL PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 5.715e-53
Identity = 110/208 (52.88%), Postives = 140/208 (67.31%), Query Frame = 2
Query:    8 SSRPSNIMSEQELQAYRAEVEAVKEWWKNPRFSRVKRTYTAEEVVNKRGTLPIAYPSNAMAKKMWALLESKARGEGGGCSMTYGALDPVQLTQMAKYLETVYVXXXXXXXXXXXXLEPGPDLADYPSNTVPLKVAQLFTAQLFHDRKQRFTRLTTPKEQRAGLGKPVDYLRPIVADADTGHGGLTAVMKLAKMMVEAGAAGIHIEDQA 631
            SS    +++E+E + + AEV AV+ WW+  RF   +R Y+A +VV+ RGTL  +Y S+ MAKK+W  L  K+    G  S T+GALDPVQ+T MAK+L+T+YV             EPGPDLADYP NTVP KV  LF AQL+HDRKQ   R++  +EQRA     VDYLRPI+AD DTG GG TA +KL K+ VE GAAG+HIEDQ+
Sbjct:    3 SSSVPPMITEEEAR-FEAEVSAVESWWRTDRFRLTRRPYSARDVVSLRGTLHHSYASDQMAKKLWRTL--KSHQSAGTASRTFGALDPVQVTMMAKHLDTIYVSGWQCSSTHTATNEPGPDLADYPYNTVPNKVEHLFFAQLYHDRKQHEARVSMTREQRAKT-PYVDYLRPIIADGDTGFGGATATVKLCKLFVERGAAGVHIEDQS 206          
BLAST of FC878917 vs. ExPASy Swiss-Prot
Match: ACEA_CANGA (Isocitrate lyase OS=Candida glabrata GN=ICL1 PE=3 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 2.172e-52
Identity = 105/202 (51.98%), Postives = 138/202 (68.32%), Query Frame = 2
Query:   41 ELQAYRAEVEA----VKEWWKNPRFSRVKRTYTAEEVVNKRGTLP-IAYPSNAMAKKMWALLESKARGEGGGCSMTYGALDPVQLTQMAKYLETVYVXXXXXXXXXXXXLEPGPDLADYPSNTVPLKVAQLFTAQLFHDRKQRFTRL-TTPKEQRAGLGKPVDYLRPIVADADTGHGGLTAVMKLAKMMVEAGAAGIHIEDQ 628
            E QA +A ++A    +++WW  PR+++ KRTY+A E+  +RGT P + YPS+ MAKK++ +LE   +   G  S T+GALDPVQ++QMAK+L+T+YV             EPGPDLADYP +TVP KV  LF AQ FHDRKQ   R   T +E+   +G  +DY+ PI+ADAD GHGGLTAV KL KM +E GAAGIH+EDQ
Sbjct:   10 EFQALQARIDADAKEIEQWWSEPRWNKTKRTYSAREIAIRRGTFPPLTYPSSVMAKKVYKVLEKHHKE--GTVSRTFGALDPVQVSQMAKFLDTIYVSGWQCSSTASTSNEPGPDLADYPMDTVPNKVEHLFKAQQFHDRKQWENRAKATSQEELDAMGPAIDYMTPIIADADAGHGGLTAVFKLTKMFIERGAAGIHMEDQ 209          
BLAST of FC878917 vs. ExPASy Swiss-Prot
Match: ACEA_PICPA (Isocitrate lyase OS=Pichia pastoris GN=ICL1 PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.837e-52
Identity = 103/202 (50.99%), Postives = 139/202 (68.81%), Query Frame = 2
Query:   35 EQELQAYRAEVEAVKEWWKNPRFSRVKRTYTAEEVVNKRGTLPIAYPSNAMAKKMWALLESKARGEGGGCSMTYGALDPVQLTQMAKYLETVYVXXXXXXXXXXXXLEPGPDLADYPSNTVPLKVAQLFTA-QLFHDRKQRFTRLTTPKEQRAGLGKPVDYLRPIVADADTGHGGLTAVMKLAKMMVEAGAAGIHIEDQAPG 637
            ++E Q ++ +++ ++EWW  PR+++ KR Y AE++  +R +L     SN  A+K++ LL   A+ E    S T+GALDP+ +TQMAKYL+T+YV             EP PDLADYP +TVP KV +L    QLFHDRKQR  RL+  K++RA L    D+LRPI+ADADTGHGG+TA++KL KM +E GAAGIHIEDQAPG
Sbjct:   11 DKEEQDFQNQIKEIEEWWSQPRWAKTKRIYNAEDIAKRRSSLSSVPASNQQAQKLFKLLGEHAKNETA--SFTFGALDPIHITQMAKYLDTIYVSGWQCSSTASTSNEPSPDLADYPMDTVPNKVERLILRRQLFHDRKQREERLSVSKQERAKLPY-TDFLRPIIADADTGHGGITAIIKLTKMFIERGAAGIHIEDQAPG 209          
BLAST of FC878917 vs. ExPASy Swiss-Prot
Match: ACEA2_SOYBN (Isocitrate lyase 2 (Fragment) OS=Glycine max GN=ICL2 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.839e-51
Identity = 108/191 (56.54%), Postives = 127/191 (66.49%), Query Frame = 2
Query:   59 AEVEAVKEWWKNPRFSRVKRTYTAEEVVNKRGTLPIAYPSNAMAKKMWALLESKARGEGGGCSMTYGALDPVQLTQMAKYLETVYVXXXXXXXXXXXXLEPGPDLADYPSNTVPLKVAQLFTAQLFHDRKQRFTRLTTPKEQRAGLGKPVDYLRPIVADADTGHGGLTAVMKLAKMMVEAGAAGIHIEDQA 631
            AEV  V+ WW + RF   KR YTA +VV+ RG L   Y SN MAKK+W LL  K     G  S T+GALDPVQ+TQMAK+L+T+YV             EPGPDLADYP +TVP KV  LF AQ +HDRKQR  R+   +E+RA     VDYLRPI+AD DTG GG TA +KL K+ VE GAAGIHIEDQ+
Sbjct:    2 AEVAEVQAWWNSERFRLTKRPYTARDVVSLRGNLRQTYASNEMAKKLWCLL--KNHQANGTASRTFGALDPVQVTQMAKHLDTIYVSGWQCSATHTTSNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREERMRMSREERART-PYVDYLRPIIADGDTGFGGTTATVKLCKLFVERGAAGIHIEDQS 189          
The following BLAST results are available for this feature:
BLAST of FC878917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
ACEA_YARLI3.459e-5855.17Isocitrate lyase OS=Yarrowia lipolytica GN=ICL1 PE... [more]
ACEA_PICJA2.479e-5654.59Isocitrate lyase OS=Pichia jadinii GN=ICL1 PE=3 SV... [more]
ACEA_DEBHA1.607e-5553.00Isocitrate lyase OS=Debaryomyces hansenii GN=ICL1 ... [more]
ACEA_ASHGO1.607e-5557.07Isocitrate lyase OS=Ashbya gossypii GN=ICL1 PE=3 S... [more]
ACEA_CANTR2.741e-5553.50Isocitrate lyase OS=Candida tropicalis GN=ICL1 PE=... [more]
ACEA_CANAL7.975e-5553.23Isocitrate lyase OS=Candida albicans GN=ICL1 PE=3 ... [more]
ACEA_DENCR5.715e-5352.88Isocitrate lyase OS=Dendrobium crumenatum GN=ICL P... [more]
ACEA_CANGA2.172e-5251.98Isocitrate lyase OS=Candida glabrata GN=ICL1 PE=3 ... [more]
ACEA_PICPA2.837e-5250.99Isocitrate lyase OS=Pichia pastoris GN=ICL1 PE=3 S... [more]
ACEA2_SOYBN1.839e-5156.54Isocitrate lyase 2 (Fragment) OS=Glycine max GN=IC... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ2YA13RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ2YA13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878917 ID=FC878917; Name=FC878917; organism=Citrus clementina; type=EST; length=638bp
AACATTCTCATCGAGACCCTCGAACATCATGTCCGAACAAGAACTCCAAG
CTTACCGAGCCGAAGTGGAAGCCGTCAAAGAATGGTGGAAGAACCCCCGT
TTCTCCAGAGTCAAACGGACCTATACAGCAGAAGAGGTCGTCAACAAGCG
CGGCACCCTACCTATCGCTTATCCGTCGAACGCGATGGCCAAGAAGATGT
GGGCGCTTTTGGAGAGTAAAGCGAGGGGGGAAGGGGGCGGGTGTAGTATG
ACTTATGGCGCCCTCGACCCCGTCCAACTCACCCAGATGGCCAAATACCT
AGAAACAGTCTACGTATCAGGCTGGCAATCTTCCTCGACCGCCTCCTCTT
CCCTCGAACCCGGCCCCGACCTCGCGGATTACCCTTCGAATACCGTCCCC
CTGAAGGTGGCGCAGCTGTTCACCGCGCAGCTGTTCCATGATCGGAAACA
GCGGTTTACTAGGTTGACCACCCCGAAGGAACAAAGGGCTGGGTTGGGGA
AGCCGGTTGATTATTTGAGACCTATTGTTGCGGATGCTGATACCGGCCAT
GGTGGACTGACGGCGGTCATGAAATTGGCCAAGATGATGGTCGAAGCCGG
CGCAGCTGGGATTCATATCGAAGATCAAGCACCTGGTA
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