FC878951
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878951 vs. ExPASy Swiss-Prot
Match: FB193_ARATH (Putative F-box protein At3g44060 OS=Arabidopsis thaliana GN=At3g44060 PE=4 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.141e-13 Identity = 68/262 (25.95%), Postives = 119/262 (45.42%), Query Frame = 3 Query: 138 EDAVRTSILSSRWKLVWASLPNLMFNDKLCYRRDGTSDNGALTRFENFVDRML-LSNSVSISKFSLHCQKKPRYLSRLKFWVALAIMRNVHEIEVNLPVDDPFEEGYEPVELPDCIYNSETLEILKLETDFVFKSPSSGICFPRVKKFHVE--IYKPNMPD---FSICPVLEDLSIDYSLNFDWDADISISSQTLKRLNLMIGGPIVFANEHQATIEAPKLEHLHVNDGTLVSYLVYELHSLCDARLDIDYSRVRSDPVRAD 905 ++AV TS+LS RW+ ++ NL F+D + R + L F +FVD L I KFSLH + K L W+ A+ V E+ ++L E +P ++NS TL L L + S P +K ++ +++ + + CP LEDL+I ++ + ISS+++K+L+L + A + T++ P + L+ +D + ++ L SL LD+ + + V+ D Sbjct: 19 KEAVSTSVLSKRWRTLFTRSDNLDFHDPISGRPE-----DILKSFNDFVDSSLAFQGGKHIKKFSLHTKIKTFEYHVLDRWICNALEHGVSELHLHL----MHESWPWLFSIPSKVFNSSTLVKLSLGSRLYCPSFPPDTSLPALKVLLLDSILFRDDQLSNVFLAACPALEDLTIHHTYH-----PCVISSKSIKKLSLSVNSGYYGAG-YILTLDTPSVVDLYYSDSPRHNAPLFHLDSLAKVTLDLHFIENNNREVQND 265
BLAST of FC878951 vs. ExPASy Swiss-Prot
Match: FBL65_ARATH (F-box/LRR-repeat protein At3g59210 OS=Arabidopsis thaliana GN=At3g59210 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.389e-12 Identity = 69/263 (26.24%), Postives = 118/263 (44.87%), Query Frame = 3 Query: 138 EDAVRTSILSSRWKLVWASLPNLMFNDKLCYRRDGTSDNGALTRFENFVDRML-LSNSVSISKFSLHCQKKPRYLSRLKFWVALAIMRNVHEIEVNLPVDDPFEEGYEPVELPDCIYNSETLEILKLETDFVFKSPSSGICFPRVKKFHVE--IYKPNMPDF----SICPVLEDLSIDYSLNFDWDA--DISISSQTLKRLNLMIGGPIVFANEHQATIEAPKLEHLHVNDGTLVSYLVYELHSLCDARLDIDYSRVRSDPVR 899 ++A TS+LS RW+ ++A +PNL F+ + + T F +FVDR+L L I+KFSL C W+ + V ++ +++ + LP ++ S+TL LK+ + +C P++K +++ +++ F S CPVLE+LS+ LN WD S+SS+ LKRL L N + + P + + +D Y SL +A + I ++V+ R Sbjct: 27 KEAALTSLLSKRWRYLFALVPNLDFDVLPSLHPEVAMQDQDQTSFIDFVDRVLKLRGKDHINKFSLKCGDGIEDEDVFP-WILNTLRHGVSDLSLHVSPSLVY-------WLPSKVFASKTLVRLKIGPKDGPRVKLRNVCLPKLKTLNLDSVVFEEGKIGFAKLLSGCPVLEELSL---LNLAWDRWDSCSVSSKILKRLTLYCAHS--SRNPKSVSFDTPNVVYFEYSDNIANKYPKVNFDSLVEASIGIRMTKVQKANAR 276
BLAST of FC878951 vs. ExPASy Swiss-Prot
Match: FDL24_ARATH (Putative F-box/FBD/LRR-repeat protein At4g00315 OS=Arabidopsis thaliana GN=At4g00315 PE=4 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.369e-12 Identity = 71/235 (30.21%), Postives = 111/235 (47.23%), Query Frame = 3 Query: 138 EDAVRTSILSSRWKLVWASLPNLMFNDKLCYRRDGTSDNGALTRFENFVDRMLLSNSVSISKFSLHCQKKPRY--LSRLK-----FWVALAIM-RNVHEIEVNLPVDDPFEEGYEPVELPDCIYNSETLEILKLETDFVFKSPSSGICFPRVKKFHVEIYKPNMPD-----FSICPVLEDLSIDYSLNFDWDADISISSQTLKRLNLMIGGPIVFANEHQATIEAPKLEHLHVND 803 +DAVRTS+LS RWK +W LP L ++ +R S+ L RF +L + +I SL K RY + +K WV+LA+ NV E+ + L F E P +LP +Y +++ ILKL+ + + P +C P +K + + D S CPVLEDL ++ D +S+ ++L+RL L + P + + P L++L V D Sbjct: 22 KDAVRTSLLSMRWKSLWMWLPKLEYD----FRHYSVSEGQGLARFITL--SLLGHKAPAIESLSL----KLRYGAIGSIKPEDIYLWVSLAVHDSNVRELSLKLCT---FAE--RPTKLPKSLYKCKSIVILKLKDEILVDVPRK-VCLPSLKTLFLGRVTYSDEDSLHRLLSNCPVLEDLVVERD-RIDNLGKLSVVVKSLQRLTLKMSCP---CHLDGIMMNTPSLKYLKVTD 236
BLAST of FC878951 vs. ExPASy Swiss-Prot
Match: FDL32_ARATH (Putative F-box/FBD/LRR-repeat protein At5g22670 OS=Arabidopsis thaliana GN=At5g22670 PE=4 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.001e-12 Identity = 74/258 (28.68%), Postives = 111/258 (43.02%), Query Frame = 3 Query: 144 AVRTSILSSRWKLVWASLPNLMFNDKLCYRRDGTSDNGALTRFENFVDRML-LSNSVSISKFSLHCQKKPRYLSRLKFWVALAIMRNVHEIEVNLPVDDPFEEGYEPVEL-PDCIYNSETLEILKLETDFVFKSPSSGICFPRVKKFH-VEIYKPN----MPDFSICPVLEDLSIDYSLNFDWDADISISSQTLKRLNLMIGGP---IVFANEHQATIEAPKLEHLHVNDGTLVSYLVYELHSLCDARLDIDYSRVRS 887 AVRTS+LS RWK S+P L FN S+ F V L S I K L +KK S L W+ A+ R V +++ Y EL P +Y ETL L+L V + PR+K H ++ PN S CPVLEDL++ + + + + S +LK L L + G + + + I+AP+L +L + D S+++ + S +D+ + VRS Sbjct: 33 AVRTSVLSKRWKRFSLSVPLLEFN---------VSEFHGYYEFARVVHGFLDTSRETCIHKLKLAFEKKQHDRSYLTQWIHNAVKRKVQHLDIG-------RWSYLGQELIPHSLYTCETLVSLRLHN--VSLPDFDHVSLPRLKTMHLIDNIYPNDALLENLISSCPVLEDLNVSRDVE-NIVKVLRVRSLSLKSLILALDGDRYGDIEDDSWEVVIDAPRLSYLSLRDDQSKSFVLSSVTSPAKVDIDVTFDVVRS 271
BLAST of FC878951 vs. ExPASy Swiss-Prot
Match: FBL32_ARATH (F-box/LRR-repeat protein At1g55660 OS=Arabidopsis thaliana GN=At1g55660 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.535e-11 Identity = 68/239 (28.45%), Postives = 111/239 (46.44%), Query Frame = 3 Query: 138 EDAVRTSILSSRWKLVWASLPNLMFNDKLCYRRDGTSDNGALTRFENFVDRMLLSNSVSISKFSLHCQK------KPRYLSRLKFWVALAI-MRNVHEIEVNLPVDDPFEEGYEPVELPDCIYNSETLEILKLETDFVFKSPSSGICFPRVKKFHVEIYKPNMPD-----FSICPVLEDLSIDYSLNFDWDADISISSQTLKRLNLMIGGPIVFANEHQATIEAPKLEHLHVNDGTLVS 818 +DAV TSILS RWK +W LP L +N +R S+ L RF + + + +I SL + KP+ + WV+LA+ + NV E+ + L F P +LP + +++ ILKL+ + + P +C P +K + + + S CPVLEDL ++ D +S+ ++L+RL L + P + + +P L++L V D L S Sbjct: 73 KDAVSTSILSMRWKSLWMWLPKLEYN----FRHYSVSEGQGLARF--ITSSLRVHKAPAIESLSLKFRYGAIGSIKPK---DIYLWVSLAVHVSNVRELSLKL-----FNFAELPTKLPKSLCKCKSIVILKLKDEILVDVPRK-VCLPSLKTLFLGRVTYSDANSLHRLLSNCPVLEDLVMERD-KIDNLGKLSVIVKSLQRLTLKMSRP---CHLDGLKMNSPSLKYLKVIDERLES 292
BLAST of FC878951 vs. ExPASy Swiss-Prot
Match: FB65_ARATH (Putative F-box protein At1g58310 OS=Arabidopsis thaliana GN=At1g58310 PE=4 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.535e-11 Identity = 67/261 (25.67%), Postives = 119/261 (45.59%), Query Frame = 3 Query: 138 EDAVRTSILSSRWKLVWASLPNLMFNDKLCYRRDGTSDNGALTRFENFVDRML-LSNSVSISKFSLHCQKKPRYLSRLKFWVALAIMRNVHEIEVNLPVDDPFEEGYEPVELPDCIYNSETLEILKLETDFVFKSPSSGICFPRVKKFHVEIYKPNMPDFSI------CPVLEDLSIDYSLNFDWDADISISSQTLKRLNLMIGGPIVFANEHQATIEAPKLEHLHVNDGTLVSYLVYELHSLCDARLDIDYSRVRSDPVR 899 ++A TS+L+ +W+ ++AS+PNL F+D + R N A++ D++L L ++ + KFSL + + R+ W+ + R V ++E+++ + LP I+ SETL LKL + + P++K H+ K + C +LE+L+++Y WD +S+S TLKRL G + N + P L +L D Y SL +A +++ S + + R Sbjct: 28 KEAASTSVLAKKWRYLFASVPNLDFDDSVHLRLG--KRNPAVS------DQVLRLQDNSPLHKFSLKIRDCVD-IVRIICWILKVLERGVSDLELDMHLK-------WKSSLPSKIFLSETLVRLKLSVERGPFIDVEDVHLPKLKTLHIVSVKFEKHGIGLNKLLSGCHILEELNLEYISWCLWDF-VSVSLTTLKRLT-FCGEVMQDENPISVSFNTPNLVYLMFTDAIADEYSTVNFDSLVEAHINLQMSEDQVEQTR 270
BLAST of FC878951 vs. ExPASy Swiss-Prot
Match: FBL63_ARATH (F-box/LRR-repeat protein At3g59190 OS=Arabidopsis thaliana GN=At3g59190 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.005e-11 Identity = 70/253 (27.67%), Postives = 110/253 (43.48%), Query Frame = 3 Query: 141 DAVRTSILSSRWKLVWASLPNLMFNDKLCYRRDGTSDNGAL---TRFENFVDR-MLLSNSVSISKFSLHCQKKPRYLSRLKFWVALAIMRNVHEIEVNLPVDDPFEEGYEPVELPDCIYNSETLEILKLETDFVFKSPSSGICFPRVKKFHVEIYK-------PNMPDFSICPVLEDLSIDYSLNFDWDADISISSQTLKRLNLMIGGPIVFANEHQATIEAPKLEHLHVNDGTLVSYLVYELHSLCDARLDI 866 +A TS+L+ RW+ + A +PNL D + Y R L F+ FVDR M L + + KFSL C K SR+ WV + R V E+++ + + YE LP + ++TL LK+ F P++K H+ P S C LE+L + + +D+ S+SS +LKR++ I + N + + P L +L D V Y SL +A + + Sbjct: 33 EAASTSVLAKRWRFLLAFVPNLDL-DNMIYDRPKMGRRKRLELRKSFKLFVDRVMALQGNAPLKKFSLRC-KIGSDPSRVNGWVLKVLDRGVEELDLYIASE------YE-YPLPPKVLMTKTLVSLKVSGTDEFTIDVGEFFLPKLKTLHLSAISFGDEGGPPFAKLISACHALEEL-VMIKMMWDYWEFCSVSSPSLKRVS--IDCENIDENPKSVSFDTPNLVYLEFTDTVAVKYPKVNFDSLVEASIGL 273
BLAST of FC878951 vs. ExPASy Swiss-Prot
Match: FBD20_ARATH (Putative FBD-associated F-box protein At5g53640 OS=Arabidopsis thaliana GN=At5g53640 PE=4 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.619e-11 Identity = 70/244 (28.69%), Postives = 108/244 (44.26%), Query Frame = 3 Query: 138 EDAVRTSILSSRWKLVWASLPNLMFNDKLCYRRDGTSDNGALTRFENFVDRMLLSNSV-SISKFSLHCQKKPRYLSRLKFWVALAIMRNVHEIEVNLPVDDPFEEGYEPVELPDCIYNSETLEILKLETDFVFKSPSSGICFPRVKKFHVE--IYKPNMPDF----SICPVLEDLSIDYSLNFDWDADI-SISSQTLKRLNL-MIGGPIVFANEHQATIEAPKLEHLHVNDGTLVSYLVYELHS 842 +D V+TS+LS+RW+ +W +P+L + + D F +F DR SN V I+K L + LK W+ A R + ++V F + + +Y E L L+L V FP +K H+E +Y PN F S CPVLEDL++ + + D + + SQ+LKR +L + + I+AP L L +ND S++V L S Sbjct: 42 KDVVKTSVLSTRWRSLWLLVPSLELDSR---------DFSDFNTFVSFCDRYFDSNRVLCINKLKLTISENEEDGFYLKSWIDAAAKRKIQHLDVQ------FLPQFHKIHFN--LYKCEALVSLRLFE--VSLDKGRIFSFPCMKTMHLEDNVY-PNEATFKELISCCPVLEDLTV---IIYGMDRKVFQVHSQSLKRFSLKRVSSFLHEVALSGVVIDAPLLCSLRINDNVSKSFIVNNLGS 262
BLAST of FC878951 vs. ExPASy Swiss-Prot
Match: FB69_ARATH (F-box protein At1g60400 OS=Arabidopsis thaliana GN=At1g60400 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.619e-11 Identity = 59/259 (22.78%), Postives = 112/259 (43.24%), Query Frame = 3 Query: 138 EDAVRTSILSSRWKLVWASLPNLMFNDKLCYRRDGTSDNGALTRFENFVDRML-LSNSVSISKFSLHCQKKPRYLSRLKFWVALAIMRNVHEIEVNLPVDDPFEEGYEPVELPDCIYNSETLEILKLETDFVFKSPSSGICFPRVKKFHVEIYKPNMPDF-----SICPVLEDLSIDYSLNFDWDADISISSQTLKRLNLMIGGPIVFANEHQATIEAPKLEHLHVNDGTLVSYLVYELHSLCDARLDIDYSRVRSDPV 896 +D+VRTS+LS W+ +W +P L TSD F F+DR + + + F + + + + + R V ++ V ++P+ + V++P +Y+ TL L L + PS +C PRVK ++ K + S C VLEDL++ + D++ + SQ++K + + I+ P+LE++ + + S++V+ + +DI + DP+ Sbjct: 34 KDSVRTSVLSKHWRNLWLHVPVLELE---------TSDFPDNLVFREFIDRFVGFDKEIDLKSFDIFYDVNVLWYDDFLWMIDDVVKRRVCDLMVT---NNPYVVNEKLVKMPISLYSCATLVNLNLSFVAMNNLPSESVCLPRVKTLYLHGVKLDGDSILGTLVSSCSVLEDLTV-VTHPGDYEKVVCFRSQSVKSFTIESQCEY---KDPNVEIDCPRLEYMCIREYQSESFVVHSIGPYAKVDVDIFFEVEYEDPL 276
BLAST of FC878951 vs. ExPASy Swiss-Prot
Match: FBD17_ARATH (FBD-associated F-box protein At5g38590 OS=Arabidopsis thaliana GN=At5g38590 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.420e-11 Identity = 67/233 (28.76%), Postives = 110/233 (47.21%), Query Frame = 3 Query: 144 AVRTSILSSRWKLVWASLPNLMFNDKLCYRRDGTSDNGALTRFENFVDRML-LSNSVSISKFSLHCQKKPRYLSRLKFWVALAIMRNVHEIEVNLPVDDPFEEGYEPVELPDCIYNSETLEILKLETDFVFKSPSSGICFPRVKKFHVEIY-----KPNMPDFSICPVLEDLSIDYSLNFDWDADISISSQTLKRLNLMIGGPIVFANEHQATIEAPKLEHLHVNDGTLVSYL 824 AV TSILS RW+ +W LPNL + + C R+ G D G +F+ + L L + I H ++ W+ +A+ R+VH++++ D F E E + L + ++L LKL + + PS +C P +K ++ K SICPVLEDLS+ Y +++ +++I +L L+L I + I+ P LE+L + D +L Sbjct: 24 AVSTSILSKRWEFLWMWLPNLDYTSRWC-RKPG--DVG----LRDFIHKNLPLHRAPVIESLRFHSNSPDIKPEDIRRWIEIAVSRHVHDLDI-----DHFSEN-ENIFL-SSFFACKSLVTLKLRSVTLRDIPSM-VCLPSLKTLLLDNVSFVEGKSLQELLSICPVLEDLSV-YCDDYENTKELTIVVPSLLSLSLYIPDEWLLDG---YWIDTPSLEYLKLEDWNSCDHL 237 The following BLAST results are available for this feature:
BLAST of FC878951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878951 ID=FC878951; Name=FC878951; organism=Citrus clementina; type=EST; length=912bpback to top |