FC878951
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878951 vs. ExPASy Swiss-Prot
Match: FBL88_ARATH (Putative F-box/LRR-repeat protein At5g41840 OS=Arabidopsis thaliana GN=At5g41840 PE=4 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.467e-11 Identity = 70/280 (25.00%), Postives = 121/280 (43.21%), Query Frame = 3 Query: 138 EDAVRTSILSSRWKLVWASLPNLMFNDKLCY--RRDGTSDNGALTRFENFVDRML---LSNSVSISKFSLHCQKKPRYLSRLKFWVALAIMRNVHEIEVNLPVDDPFEEGYEPVELPDCIYNSETLEILKLE-TDFVFKSPSSGICFPRVKKFHVEIYKPNMPD----FSICPVLEDLSIDYSLNFDWDAD----ISISSQTLKRLNL-----MIGGPIVFANEH---------QATIEAPKLEHLHVNDGTLVSYLVYELHSLCDARLDIDYSRVRSDP 893 ++A T++L+ RWK + A +PNL F+D + + R + + F +FVD +L + +F + C+ S + W+ + R V +I++++ + E LP I+ S+TL LK++ D V G+ P++K H++ +K S C LE+L + + D D +S+S TLKRLN G F ++ + + P L +L +D + Y SL +A L R+R P Sbjct: 34 KEAASTTVLAKRWKPLLAFVPNLNFDDSIYFHPRARRNKYSKSYESFMSFVDSVLALQAKTKTPLKRFHVKCEDVVDQ-SWVLEWIPKVLKRGVLDIDLHITSSRNYCENSSFYSLPSKIFVSKTLVRLKIQFQDGVHIDVEGGVSLPKLKTLHLDYFKIETSMLNKLLSGCHALEELVLANLMWADSSEDEACHVSVSIPTLKRLNFCRSEDFYEGEFHFYEDYDEENINEGVSLSFDNPNLVYLEYSDVIVDKYKQVSFDSLVEANL-----RLRKTP 307
BLAST of FC878951 vs. ExPASy Swiss-Prot
Match: FB207_ARATH (Putative F-box protein At3g58860 OS=Arabidopsis thaliana GN=At3g58860 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.834e-11 Identity = 70/255 (27.45%), Postives = 117/255 (45.88%), Query Frame = 3 Query: 126 SRKVEDAVRTSILSSRWKLVWASLPNLMFNDK-LCYRRDGTSD-NGALTRFENFVDRML-LSNSVSISKFSLHCQKKPRYLSRLKFWVALAIMRNVHEIEVNLPVDDPFEEGYEPVELPDCIYNSETLEILKLETDFVFKSPSSGICFPRVKKFHVEIYKPNMPDFS----ICPVLEDLSIDYSLNFDW-DADISISSQTLKRLNLMIGGPIVFANEHQATIEAPKLEHLHVNDGTLVSYLVYELHSLCDARLDI 866 S ++A TS+L+ +W+ ++A +P+L FND + ++G + +G L F +FVDR+L L + I KFSL+ K R+ W+ + R V + + + FEE Y LP I S+TL LK + P +K +E + F CPVLE+L + LN +W D ++ +SS +LK L + + + + P L L D Y + L +L + +++ Sbjct: 23 SLPTKEAASTSVLAKKWRYLFAFVPSLDFNDSDFLHPQEGKREKDGILRSFMDFVDRVLALQGASPIKKFSLNV-KTGVDPDRVDRWICNVLQRGVSHLALFM----DFEEEY---SLPYEISVSKTLVELKTGYGVDLYLWDDDMFLPMLKTLVLESVEFGRGQFQTLLPACPVLEELML---LNMEWKDRNVILSSSSLKNLKITSEDGCL----GTLSFDTPNLVFLDYYDYVAEDYPIVNLKNLVEVGINL 262
BLAST of FC878951 vs. ExPASy Swiss-Prot
Match: FB268_ARATH (Putative F-box protein At5g38390 OS=Arabidopsis thaliana GN=At5g38390 PE=4 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.620e-11 Identity = 70/264 (26.52%), Postives = 120/264 (45.45%), Query Frame = 3 Query: 138 EDAVRTSILSSRWKLVWASLPNLMFNDKLCYRRDGTSDNGALTRFENFVDRML-LSNSVSISKFSLHCQKKPRYLSRLKFWVALAIMRNVHEIEVNLPVDDPFEEGYEPVELPDCIYNSETLEILKLETDFVFKSPSSGICFPRVKKFHVEIYKPNMPDFSI----CPVLEDLSIDYSLNFDWD----ADISISSQTLKRLNLMIGGPIVFANEHQATIEAPKLEHLHVNDGTLVSYLVYELHSLCDARLDI-----DYSRVRS 887 ++A TS+LS RW+ + A +PN+ D+ F +FVDR+L L + I+KFSL C R+ W+ ++R V E+ +++ VD FE+ Y P N +++KL ++ S I P +K +E ++ F I P LE+L ++ N W D+ +SS++LK L + H + + P L +L + + Y ++ +L +AR+ + D SRVR+ Sbjct: 22 KEAALTSVLSKRWRNLIAFVPNV-----------DIVDHDIRELFMDFVDRVLALQGNSPINKFSLDCSGVDS--DRVDCWIQNVMVRGVSELNLSIFVDSVFEDDYN--LFPKVFENK---KLVKLGLSYISWLDGS-IFLPMLKTLVLESVLLSVEKFEILLHALPALEELVMN---NIYWKERDVVDLIVSSESLKTLTINF-----IVCTHTLSFDTPILAYLSYSGYVVDDYAEAKMENLFEARISLLVVEGDISRVRA 258
BLAST of FC878951 vs. ExPASy Swiss-Prot
Match: FBL61_ARATH (Putative F-box/LRR-repeat protein At3g59160 OS=Arabidopsis thaliana GN=At3g59160 PE=4 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.951e-11 Identity = 74/287 (25.78%), Postives = 120/287 (41.81%), Query Frame = 3 Query: 138 EDAVRTSILSSRWKLVWASLPNLMFNDKLCYRRDGTSDN-------------------GALTRFENFVDRML-LSNSVSISKFSLHC--QKKPRYLSRLKFWVALAIMRNVHEIEVNLPVDDPFEEGYEPVELPDCIYNSETLEILKLETDFVFKSPSSGICFPRVKKFHVEIYKPNMPD------FSICPVLEDLSIDYSLNFDWDADISISSQTLKRLNLMIGGPIVFANEHQ-----ATIEAPKLEHLHVNDGTLVSYLVYELHSLCDARLDIDYSRVRSDPVR 899 ++A TS+LS RW+ + A +PNL F+D RD N T F +FVDR+L L + + KFSL P + W+ ++R V ++ + + ++ E LP I+ +ETL L L+ + P++K H+E + D S CP LE+L + + + W S+S TLKRL + F H+ + + P L +L + +Y SL +A++DI + + D VR Sbjct: 33 KEAASTSLLSRRWRYLLAFVPNLEFDDSAYLHRDKRVKNPLHEKGLVGFVLTVDDKRKKLSTSFPDFVDRILDLQGNSPLDKFSLKMVDDHDPVDPDCVAPWIHKVLVRGVSDLHLVIDMN-------EWTSLPAKIFLTETLVKLTLKIRDGPPIDVKHVHLPKLKTLHLESVMFDEEDIGFSKLLSGCPELEELVLHHIWSCVW-TSCSVSVATLKRLTFCCNN-MKFCGMHEENPNNVSFDTPNLVYLEYAEVIANNYPKVNFDSLVEAKIDIWMTNDQLDEVR 310 The following BLAST results are available for this feature:
BLAST of FC878951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878951 ID=FC878951; Name=FC878951; organism=Citrus clementina; type=EST; length=912bpback to top |