FC878953

Overview
NameFC878953
Unique NameFC878953
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length798
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878953 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 1.078e-47
Identity = 89/150 (59.33%), Postives = 114/150 (76.00%), Query Frame = 1
Query:  349 LSNYLDAQYFGPITLGTPPQSFRVVFDTGSSNLWVPSKKCHYTNIACMLHNKYDSSKSSSYRANGTAFAIQYGSGSLSGFLSTDQISLGGITVKEQTFAEAISEPGLAFVAAKFDGILGMGFSSIAVDCVPPVFDNMVAQGLVQQPVFSF 798
            L NY++AQYFG I +GTPPQ F V+FDTGSSNLWVPS KC+++ IAC  H++Y S +SS+Y+ NG   AIQYG+GS++GF S D +++G + VK+Q F EA  EPGL F+ AKFDGILG+GF  I+V    PV+  MV QGLV +PVFSF
Sbjct:   77 LKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFS-IACFFHSRYKSGQSSTYQKNGKPAAIQYGTGSIAGFFSEDSVTVGDLVVKDQEFIEATKEPGLTFMVAKFDGILGLGFQEISVGDAVPVWYKMVEQGLVSEPVFSF 225          
BLAST of FC878953 vs. ExPASy Swiss-Prot
Match: CATE_RANCA (Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.408e-47
Identity = 101/194 (52.06%), Postives = 133/194 (68.56%), Query Frame = 1
Query:  247 PLERAASARRSLLEVGTELRSLRLRHA----------SGP--SPEPLSNYLDAQYFGPITLGTPPQSFRVVFDTGSSNLWVPSKKCHYTNIACMLHNKYDSSKSSSYRANGTAFAIQYGSGSLSGFLSTDQISLGGITVKEQTFAEAISEPGLAFVAAKFDGILGMGFSSIAVDCVPPVFDNMVAQGLVQQPVF 792
            PL+R  S R+ L E G +L  L  +            S P  + EPL NYLD +YFG I++GTPPQ F V+FDTGSSNLWVPS  C  T+ AC  HN+Y  S+S++Y +NG AF IQYG+G+L+G L  DQ+++ GITV+ QTFAE++SEPG  F  + FDGILG+ + ++AVD   PVFDNM+AQ LV+ P+F
Sbjct:   21 PLKRQKSMRKILKEKG-KLSHLWTKQGNEFLQLSDSCSSPETASEPLMNYLDVEYFGQISIGTPPQQFTVIFDTGSSNLWVPSIYC--TSQACTKHNRYRPSESTTYVSNGEAFFIQYGTGNLTGILGIDQVTVQGITVQSQTFAESVSEPGSTFQDSNFDGILGLAYPNLAVDNCIPVFDNMIAQNLVELPLF 211          
BLAST of FC878953 vs. ExPASy Swiss-Prot
Match: RENI_CALJA (Renin OS=Callithrix jacchus GN=REN PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.137e-47
Identity = 95/186 (51.08%), Postives = 130/186 (69.89%), Query Frame = 1
Query:  250 LERAASARRSLLEVGTELRSL---RLRHASGPSPEPLSNYLDAQYFGPITLGTPPQSFRVVFDTGSSNLWVPSKKCHYTNIACMLHNKYDSSKSSSYRANGTAFAIQYGSGSLSGFLSTDQISLGGITVKEQTFAEAISEPGLAFVAAKFDGILGMGFSSIAVDCVPPVFDNMVAQGLVQQPVFSF 798
            L+R  S R SL E G ++  L   R+   +  S   L+NY+D QY+G I +GTPPQ+F+VVFDTGSSN+WVPS KC     AC+ H  +D+S SSSY+ NGT   ++Y +G++SGFLS D I++GGITV  QTF E    P L F+ A+FDG++GMGFS  A+  V P+FDN+++QGL+++ VFSF
Sbjct:   36 LKRMPSIRESLKERGVDMARLGPERMALVNITSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDVITVGGITV-TQTFGEVTEMPALPFMLAEFDGVVGMGFSEQAIGKVTPLFDNIISQGLLKEDVFSF 220          
BLAST of FC878953 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.192e-46
Identity = 86/150 (57.33%), Postives = 113/150 (75.33%), Query Frame = 1
Query:  349 LSNYLDAQYFGPITLGTPPQSFRVVFDTGSSNLWVPSKKCHYTNIACMLHNKYDSSKSSSYRANGTAFAIQYGSGSLSGFLSTDQISLGGITVKEQTFAEAISEPGLAFVAAKFDGILGMGFSSIAVDCVPPVFDNMVAQGLVQQPVFSF 798
            L NY++AQYFG I +GTPPQ F V+FDTGSSNLWVPS KC+++ IAC LH++Y +  SS+Y+ NG   AIQYG+GS++G+ S D +++G + VK+Q F EA  EPG+ F+ AKFDGILG+GF  I+V    PV+  M+ QGLV  PVFSF
Sbjct:   76 LKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFS-IACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSF 224          
BLAST of FC878953 vs. ExPASy Swiss-Prot
Match: CATEB_XENLA (Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.916e-46
Identity = 87/151 (57.62%), Postives = 112/151 (74.17%), Query Frame = 1
Query:  343 EPLSNYLDAQYFGPITLGTPPQSFRVVFDTGSSNLWVPSKKCHYTNIACMLHNKYDSSKSSSYRANGTAFAIQYGSGSLSGFLSTDQISLGGITVKEQTFAEAISEPGLAFVAAKFDGILGMGFSSIAVDCVPPVFDNMVAQGLVQQPVFS 795
            EPL NY+D QYFG I++GTPPQ+F V+FDTGSSNLWVPS  C   + AC  HN++    SS+Y +NG  F++QYG+GSLSG +  D +++ GI V+ Q F E++SEPG  FV A FDGILG+G+ SIAV    PVFDNM+AQ LV+ P+FS
Sbjct:   64 EPLINYMDVQYFGEISIGTPPQNFTVIFDTGSSNLWVPSVYC--ISPACAQHNRFQPQLSSTYESNGNNFSLQYGTGSLSGVIGIDSVTVEGILVQNQQFGESVSEPGSTFVDASFDGILGLGYPSIAVGGCTPVFDNMIAQNLVELPMFS 212          
BLAST of FC878953 vs. ExPASy Swiss-Prot
Match: CATE_CAVPO (Cathepsin E OS=Cavia porcellus GN=CTSE PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.009e-45
Identity = 99/190 (52.11%), Postives = 129/190 (67.89%), Query Frame = 1
Query:  247 PLERAASARRSLLEVG--TEL---RSLRLRHASG--PSPEPLSNYLDAQYFGPITLGTPPQSFRVVFDTGSSNLWVPSKKCHYTNIACMLHNKYDSSKSSSYRANGTAFAIQYGSGSLSGFLSTDQISLGGITVKEQTFAEAISEPGLAFVAAKFDGILGMGFSSIAVDCVPPVFDNMVAQGLVQQPVFS 795
            PL R  S R+ L   G  TEL   ++L +   S    + EPL NYLD +YFG I++G+PPQ+F V+FDTGSSNLWVPS  C  T+ AC  H  +  S SS+YR  G +F+IQYG+GSL+G +  DQ+S+ G+TV  Q F E++ EPG  FV A+FDGILG+G+ S+A   V PVFDNM+AQ LV  P+FS
Sbjct:   25 PLSRRESLRKKLRAQGQLTELWKSQNLNMDQCSTIQSANEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYC--TSPACQTHPVFHPSLSSTYREVGNSFSIQYGTGSLTGIIGADQVSVEGLTVVGQQFGESVQEPGKTFVHAEFDGILGLGYPSLAAGGVTPVFDNMMAQNLVALPMFS 212          
BLAST of FC878953 vs. ExPASy Swiss-Prot
Match: RENI1_MOUSE (Renin-1 OS=Mus musculus GN=Ren1 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.721e-45
Identity = 95/192 (49.48%), Postives = 129/192 (67.19%), Query Frame = 1
Query:  247 PLERAASARRSLLEVGTELRSL---------RLRHASGPSPEPLSNYLDAQYFGPITLGTPPQSFRVVFDTGSSNLWVPSKKCHYTNIACMLHNKYDSSKSSSYRANGTAFAIQYGSGSLSGFLSTDQISLGGITVKEQTFAEAISEPGLAFVAAKFDGILGMGFSSIAVDCVPPVFDNMVAQGLVQQPVFS 795
            PL++  S R  L E G ++  L         R    +  SP  L+NYL+ QY+G I +GTPPQ+F+V+FDTGS+NLWVPS KC    +AC +H+ Y+SS SSSY  NG+ F I YGSG + GFLS D +++GGITV  QTF E    P + F+ AKFDG+LGMGF + AV  V PVFD++++QG++++ VFS
Sbjct:   33 PLKKMPSVREILEERGVDMTRLSAEWGVFTKRPSLTNLTSPVVLTNYLNTQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDSSSYMENGSDFTIHYGSGRVKGFLSQDSVTVGGITV-TQTFGEVTELPLIPFMLAKFDGVLGMGFPAQAVGGVTPVFDHILSQGVLKEEVFS 223          
BLAST of FC878953 vs. ExPASy Swiss-Prot
Match: RENI_PANTR (Renin OS=Pan troglodytes GN=REN PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.248e-45
Identity = 93/192 (48.44%), Postives = 128/192 (66.67%), Query Frame = 1
Query:  250 LERAASARRSLLEVGTELRSL---------RLRHASGPSPEPLSNYLDAQYFGPITLGTPPQSFRVVFDTGSSNLWVPSKKCHYTNIACMLHNKYDSSKSSSYRANGTAFAIQYGSGSLSGFLSTDQISLGGITVKEQTFAEAISEPGLAFVAAKFDGILGMGFSSIAVDCVPPVFDNMVAQGLVQQPVFSF 798
            L+R  S R SL E G ++  L         RL   +  S   L+NY+D QY+G I +GTPPQ+F+VVFDTGSSN+WVPS KC     AC+ H  +D+S SSSY+ NGT   ++Y +G++SGFLS D I++GGITV  Q F E    P L F+ A+FDG++GMGF   A+  V P+FDN+++QG++++ VFSF
Sbjct:   36 LKRMPSIRESLKERGVDMARLGPEWSQPMKRLTLGNTTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSF 226          
BLAST of FC878953 vs. ExPASy Swiss-Prot
Match: RENI_HUMAN (Renin OS=Homo sapiens GN=REN PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.248e-45
Identity = 93/192 (48.44%), Postives = 128/192 (66.67%), Query Frame = 1
Query:  250 LERAASARRSLLEVGTELRSL---------RLRHASGPSPEPLSNYLDAQYFGPITLGTPPQSFRVVFDTGSSNLWVPSKKCHYTNIACMLHNKYDSSKSSSYRANGTAFAIQYGSGSLSGFLSTDQISLGGITVKEQTFAEAISEPGLAFVAAKFDGILGMGFSSIAVDCVPPVFDNMVAQGLVQQPVFSF 798
            L+R  S R SL E G ++  L         RL   +  S   L+NY+D QY+G I +GTPPQ+F+VVFDTGSSN+WVPS KC     AC+ H  +D+S SSSY+ NGT   ++Y +G++SGFLS D I++GGITV  Q F E    P L F+ A+FDG++GMGF   A+  V P+FDN+++QG++++ VFSF
Sbjct:   36 LKRMPSIRESLKERGVDMARLGPEWSQPMKRLTLGNTTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSF 226          
BLAST of FC878953 vs. ExPASy Swiss-Prot
Match: CATEA_XENLA (Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.248e-45
Identity = 95/194 (48.97%), Postives = 130/194 (67.01%), Query Frame = 1
Query:  247 PLERAASARRSLLEVG------TELRSLRLRHASGPS-----PEPLSNYLDAQYFGPITLGTPPQSFRVVFDTGSSNLWVPSKKCHYTNIACMLHNKYDSSKSSSYRANGTAFAIQYGSGSLSGFLSTDQISLGGITVKEQTFAEAISEPGLAFVAAKFDGILGMGFSSIAVDCVPPVFDNMVAQGLVQQPVFS 795
            PL+R  S R++L E G      T+     +++    S      EPL NY+D +YFG I++GTPPQ+F V+FDTGSSNLWVPS  C   + AC  H+++    SS+Y +NG  F++QYG+GSLSG +  D +++ GI V+ Q F E++SEPG  FV A+FDGILG+G+ SIAV    PVFDNM+AQ LV+ P+FS
Sbjct:   21 PLKRQKSIRKTLKEKGKLSHIWTQQGIDMVQYTDSCSNDQAPSEPLINYMDVEYFGEISVGTPPQNFTVIFDTGSSNLWVPSVYC--ISQACAQHDRFQPQLSSTYESNGNNFSLQYGTGSLSGVIGIDAVTVEGILVQNQQFGESVSEPGSTFVDAEFDGILGLGYPSIAVGDCTPVFDNMIAQNLVELPMFS 212          
The following BLAST results are available for this feature:
BLAST of FC878953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
ASPR1_ORYSJ1.078e-4759.33Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
CATE_RANCA1.408e-4752.06Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1[more]
RENI_CALJA3.137e-4751.08Renin OS=Callithrix jacchus GN=REN PE=2 SV=1[more]
ASPR_HORVU1.192e-4657.33Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
CATEB_XENLA5.916e-4657.62Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=... [more]
CATE_CAVPO1.009e-4552.11Cathepsin E OS=Cavia porcellus GN=CTSE PE=1 SV=1[more]
RENI1_MOUSE1.721e-4549.48Renin-1 OS=Mus musculus GN=Ren1 PE=1 SV=1[more]
RENI_PANTR2.248e-4548.44Renin OS=Pan troglodytes GN=REN PE=3 SV=1[more]
RENI_HUMAN2.248e-4548.44Renin OS=Homo sapiens GN=REN PE=1 SV=1[more]
CATEA_XENLA2.248e-4548.97Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA87BA08RM1 IVIA1 Citrus clementina cDNA clone IC0AAA87BA08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878953 ID=FC878953; Name=FC878953; organism=Citrus clementina; type=EST; length=798bp
CACGCACGAGACAATTTCAATAAATAAATAGCAGTCACAACGAAGGCGAC
GGACAGTTCGCTTCGGAGAGAGCTTCGAGAATCTCTTCGCAACTACTTGT
AAAAAATAGTGTCGCATTTTGTCTGAACTTTGCGAATACAAAGACAATTT
TGTAGAACAGTTCGTAAGAAGGGCAGCATGAGTCGCCTGTCCCTGTTGTT
GGTGGTGGCGGTGGCGGCGAGCTGCGCCTCGGCTCTCGTCAGGGTGCCGC
TGGAGCGCGCGGCGTCGGCCCGGCGCTCGCTGCTGGAGGTGGGCACGGAG
CTCCGCTCGCTACGCCTGCGACACGCTTCAGGGCCTTCGCCTGAGCCACT
CTCCAACTACCTCGATGCGCAGTACTTCGGCCCCATAACGCTGGGCACGC
CGCCGCAGTCGTTCCGCGTGGTGTTCGACACCGGCTCCTCCAACCTCTGG
GTGCCCTCCAAGAAGTGCCACTACACCAACATCGCCTGCATGCTCCACAA
CAAATATGACAGCAGCAAGTCGAGCAGCTACCGCGCCAACGGCACCGCCT
TCGCCATCCAGTACGGCTCCGGCAGCCTCTCCGGGTTCCTCTCCACCGAC
CAGATCTCCCTGGGCGGCATCACGGTGAAGGAGCAGACGTTCGCGGAGGC
CATCTCGGAGCCGGGGCTCGCCTTCGTGGCCGCCAAGTTCGACGGCATCC
TCGGCATGGGCTTCAGCAGCATCGCCGTGGACTGCGTGCCGCCCGTGTTC
GACAACATGGTGGCGCAGGGGCTGGTGCAGCAGCCCGTGTTCTCGTTC
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