FC878986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878986 vs. ExPASy Swiss-Prot
Match: ATG18_PICPA (Autophagy-related protein 18 OS=Pichia pastoris GN=ATG18 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.479e-11 Identity = 38/114 (33.33%), Postives = 64/114 (56.14%), Query Frame = 1 Query: 538 TGFSDVDEIELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVL 879 TG + V + ++NQD C + G G++I+N EPF + L IVEMLF +++A+VG G+ P K+ +++ + I E F + + +VK++RER+VV+L Sbjct: 12 TGNAQVTHESINFANFNQDSTCVSVGYQSGYKIFNVEPFTKCL--SLADTSIGIVEMLFSSSLVAIVGLGELPDSSPRKLKVFNTKRRSIICELTFPTSILAVKMNRERMVVLL 123
BLAST of FC878986 vs. ExPASy Swiss-Prot
Match: ATG18_CHAGB (Autophagy-related protein 18 OS=Chaetomium globosum GN=ATG18 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.419e-11 Identity = 38/111 (34.23%), Postives = 64/111 (57.66%), Query Frame = 1 Query: 547 SDVDEIELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVL 879 +D+ +L V++NQD+ C A TS GFRIY+ +PF + F D G I+EMLF +++A+V + P ++I + + I + F + V +V+L+R+ + VVL Sbjct: 2 ADLSNTKLNYVTFNQDHSCLAVATSRGFRIYHTDPFSKIFNSD--EGNVTIIEMLFSTSLVAMVRS-------PRHLVIQNTKRGSIICDLTFPTAVLAVRLNRKTLAVVL 103
BLAST of FC878986 vs. ExPASy Swiss-Prot
Match: ATG18_BOTFB (Autophagy-related protein 18 OS=Botryotinia fuckeliana (strain B05.10) GN=atg18 PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 9.419e-11 Identity = 38/101 (37.62%), Postives = 59/101 (58.42%), Query Frame = 1 Query: 577 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVL 879 V++NQDY C A GT+ GFRIY+ EPF + F D + I+EMLF +++A+ + P ++I + + I E F S V +V+L+R+R V+L Sbjct: 4 VTFNQDYSCLAVGTAKGFRIYHTEPFSKIFTGD--NENVTIIEMLFSTSLVAI-------KQSPRHIVIQNTKRGTVICELTFPSAVLAVRLNRKRFAVLL 95 The following BLAST results are available for this feature:
BLAST of FC878986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878986 ID=FC878986; Name=FC878986; organism=Citrus clementina; type=EST; length=879bpback to top |