FC879001
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC879001 vs. ExPASy Swiss-Prot
Match: MCAT_MACFA (Mitochondrial carnitine/acylcarnitine carrier protein OS=Macaca fascicularis GN=SLC25A20 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.909e-15 Identity = 59/179 (32.96%), Postives = 89/179 (49.72%), Query Frame = 2 Query: 383 FTYVCL----YPLDTIKTKLQTK-----GASKMYSSTFDAIFKTFQTKGILGFYSGVSAVLVGSTASSAIYFGTCEFGKSFLSK----LEIYPSVLIPPTAGAMGNIVSSAIMVPKELITQRMQAGAKG------RSWEVLLKILEVDGILGLYAGYSATLLRNLPAGVLSYSSFEYLK 862 F VCL +PLDT+K +LQT+ G MYS TFD KT +GI G Y G++A ++G T A+ F GK K + YP + AG + I ++ IM P E I +Q A + + K+ + GI G+Y G TL+R++PA + + ++E++K Sbjct: 19 FGGVCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYSGTFDCFRKTLFREGIRGLYRGMAAPIIGVTPMFAVCFFGFGLGKKLQQKHPEDVLSYPQLF---AAGMLSGIFTTGIMTPGERIKCLLQIQASSGETKYTGTLDCAKKLYQEFGIRGIYKGTVVTLMRDVPASGMYFMTYEWVK 194 HSP 2 Score: 72.4034 bits (176), Expect = 3.932e-12 Identity = 50/170 (29.41%), Postives = 84/170 (49.41%), Query Frame = 2 Query: 383 FTYVCLYPLDTIKTKLQTKGAS--KMYSSTFDAIFKTFQTKGILGFYSGVSAVLVGSTASSAIYFGTCEFGKSF-------LSKLEIYPSVLIPPTAGAMGNIVSSAIMVPKELITQRMQAGAKGR----SWEVLLKILEVDGILGLYAGYSATLLRNLPAGVLSYSSFE 853 FT + P + IK LQ + +S Y+ T D K +Q GI G Y G L+ +S +YF T E+ K+ +S+L + P VL+ AG + I + A+ +P +++ R Q G+ +VL +++ +G+ LY G++A ++R PA + FE Sbjct: 123 FTTGIMTPGERIKCLLQIQASSGETKYTGTLDCAKKLYQEFGIRGIYKGTVVTLMRDVPASGMYFMTYEWVKNIFTPEGKRVSELSV-PRVLV---AGGIAGIFNWAVAIPPDVLKSRFQTAPPGKYPNGFRDVLRELIPDEGVTSLYKGFNAVMIRAFPANAACFLGFE 288
BLAST of FC879001 vs. ExPASy Swiss-Prot
Match: MCAT_MOUSE (Mitochondrial carnitine/acylcarnitine carrier protein OS=Mus musculus GN=Slc25a20 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15 Identity = 55/169 (32.54%), Postives = 83/169 (49.11%), Query Frame = 2 Query: 401 YPLDTIKTKLQTK-----GASKMYSSTFDAIFKTFQTKGILGFYSGVSAVLVGSTASSAIYFGTCEFGKSFLSKLE----IYPSVLIPPTAGAMGNIVSSAIMVPKELITQRMQAGAK------GRSWEVLLKILEVDGILGLYAGYSATLLRNLPAGVLSYSSFEYLK 862 +PLDT+K +LQT+ G MYS T D KT +GI G Y G++A ++G T A+ F GK K YP + TAG + + ++ IM P E I +Q A + + K+ + GI G Y G TL+R++PA + + ++E+LK Sbjct: 29 HPLDTVKVRLQTQPPSLSGQPPMYSGTLDCFRKTLMREGITGLYRGMAAPIIGVTPMFAVCFFGFGLGKKLQQKSPEDELSYPQLF---TAGMLSGVFTTGIMTPGERIKCLLQIQASSGENKYSGTLDCAKKLYQEFGIRGFYKGTVLTLMRDVPASGMYFMTYEWLK 194 HSP 2 Score: 74.7146 bits (182), Expect = 7.923e-13 Identity = 53/171 (30.99%), Postives = 84/171 (49.12%), Query Frame = 2 Query: 383 FTYVCLYPLDTIKTKLQTKGAS--KMYSSTFDAIFKTFQTKGILGFYSGVSAVLVGSTASSAIYFGTCEF--------GKSFLSKLEIYPSVLIPPTAGAMGNIVSSAIMVPKELITQRMQAGAKGR----SWEVLLKILEVDGILGLYAGYSATLLRNLPAGVLSYSSFE 853 FT + P + IK LQ + +S YS T D K +Q GI GFY G L+ +S +YF T E+ GKS +S L + P +L+ AG I + A+ +P +++ R Q G+ +VL +++ +G+ LY G++A ++R PA + FE Sbjct: 123 FTTGIMTPGERIKCLLQIQASSGENKYSGTLDCAKKLYQEFGIRGFYKGTVLTLMRDVPASGMYFMTYEWLKNLFTPEGKS-VSDLSV-PRILV---AGGFAGIFNWAVAIPPDVLKSRFQTAPPGKYPNGFRDVLRELIREEGVTSLYKGFNAVMIRAFPANAACFLGFE 288
BLAST of FC879001 vs. ExPASy Swiss-Prot
Match: MRS4_YEAST (Mitochondrial RNA-splicing protein MRS4 OS=Saccharomyces cerevisiae GN=MRS4 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.465e-15 Identity = 47/155 (30.32%), Postives = 79/155 (50.97%), Query Frame = 2 Query: 398 LYPLDTIKTKLQTKGASKMYSS-TFDAIFKTFQTKGILGFYSGVSAVLVGSTASSAIYFGTCEFGKSFLSKLEIYPSVLIPPTA--GAMGNIVSSAIMVPKELITQRMQAGAKGRSWEVLLKILEVDGILGLYAGYSATLLRNLPAGVLSYSSFE 853 ++P+D +KT++Q G +K S+ I K +G + + GV +V++G+ + A+YFGT EF K+ L E + TA G + I + A+M P + + QR+Q R W V +I + +G Y Y TL N+P ++ +E Sbjct: 41 MFPIDALKTRVQAAGLNKAASTGMISQISKISTMEGSMALWKGVQSVILGAGPAHAVYFGTYEFCKARLISPEDMQTHQPMKTALSGTIATIAADALMNPFDTVKQRLQLDTNLRVWNVTKQIYQNEGFAAFYYSYPTTLAMNIPFAAFNFMIYE 195
BLAST of FC879001 vs. ExPASy Swiss-Prot
Match: SAMC_DROME (S-adenosylmethionine mitochondrial carrier protein homolog OS=Drosophila melanogaster GN=CG4743 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 1.106e-14 Identity = 47/161 (29.19%), Postives = 84/161 (52.17%), Query Frame = 2 Query: 392 VCLYPLDTIKTKLQTKGASKMYSSTFDAIFKTFQTKGILGFYSGVSAVLVGSTASSAIYFGTCEFGKSFLSKL-EIYPSVLIPPTAGAMGNIVSSAIMVPKELITQRMQA--GAKGRSWEVLLKILEVDGI-LGLYAGYSATLLRNLPAGVLSYSSFEYLK 862 + L+P+DT+KT+LQ++ ++ G G Y G++ GS ++A++F T E GK FLS + + S + A + +++ I VP E+ QR Q G K ++LL+ +G+ GLY G+ +T++R +P ++ + +EY K Sbjct: 29 IALFPIDTVKTRLQSE-------------LGFWRAGGFRGIYKGLAPAAAGSAPTAALFFCTYECGKQFLSSVTQTKDSPYVHMAAASAAEVLACLIRVPVEIAKQRSQTLQGNKQSGLQILLRAYRTEGLKRGLYRGFGSTIMREIPFSLIQFPLWEYFK 176
BLAST of FC879001 vs. ExPASy Swiss-Prot
Match: MCFJ_DICDI (Mitochondrial substrate carrier family protein J OS=Dictyostelium discoideum GN=mcfJ PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.106e-14 Identity = 59/172 (34.30%), Postives = 88/172 (51.16%), Query Frame = 2 Query: 398 LYPLDTIKTKLQTKGASKM------YSSTFDAIFKTFQTKGILGFYSGVSAVLVGSTASSAIYFGTCEFGKS-FLSKLEIYPSVLIPPT--AGAMGNIVSSAIMVPKELITQRMQAGA-------KGRSWEVLLKILEVDGILGLYAGYSATLLRNLPAGVLSYSSFEYLKA 865 ++PLD I+T+LQ +G+ + Y+ TFD K + +G Y G G S AIYFG+ EF K FL S L+ T +GA+ ++S I VP ++ TQ +Q KG S +V KI GI GLY G+ AT++RN+P + + ++E K+ Sbjct: 46 MFPLDVIRTRLQVQGSQNVIQSFPQYNGTFDGFKKLIRLEGKRALYKGFLTSECGYLCSRAIYFGSYEFVKQGFLKGRSDSDSDLLFVTTISGAISEALASVIWVPFDVATQSVQIQGSLSKPKYKGGS-DVFKKIYGERGIKGLYKGFGATIIRNVPYSGIWWGTYEISKS 216
BLAST of FC879001 vs. ExPASy Swiss-Prot
Match: MCFG_DICDI (Mitochondrial substrate carrier family protein G OS=Dictyostelium discoideum GN=mcfG PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.106e-14 Identity = 51/170 (30.00%), Postives = 88/170 (51.76%), Query Frame = 2 Query: 401 YPLDTIKTKLQTKGASK-MYSSTFDAIFKTFQTKGILGFYSGVSAVLVGSTASSAIYFGTCEFGKSFLSKLEIYPSVLIP----PTAGAMGNIVSSAIMVPKELITQRMQA--GAKGR---SWEVLLKILEVDGILGLYAGYSATLLRNLPAGVLSYSSFEYLKAAVLSR 880 +PLDTIK +LQT+ +YS T D + KT +G G Y GV++ LVG + +++ F K+ + KL P+ + AGA+ I + P +L +MQ G K + + + +I +V G+ G++ G ATL+R++PA + ++E + + S+ Sbjct: 32 HPLDTIKVRLQTQSVGNPIYSGTMDCLKKTISQEGFAGLYKGVASPLVGLSIMNSVMFLAYGQSKTLIQKLSDNPNEALDLKGLTAAGALAGIAIGFVDAPVDLFKSQMQVQQGDKNQYKSTADCAKQIWKVGGVRGVFQGLGATLVRDIPANACYFGAYELCRDFLASK 201
BLAST of FC879001 vs. ExPASy Swiss-Prot
Match: COLT_DROME (Congested-like trachea protein OS=Drosophila melanogaster GN=colt PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.463e-14 Identity = 57/178 (32.02%), Postives = 88/178 (49.44%), Query Frame = 2 Query: 401 YPLDTIKTKLQTK-----GASKMYSSTFDAIFKTFQTKGILGFYSGVSAVLVGSTASSAIYFGTCEFGKSFLSKLE----IYPSVLIPPTAGAMGNIVSSAIMVPKELI-----TQRMQAGAKGRSW--EVLLKILEVDGILGLYAGYSATLLRNLPAGVLSYSSFEYLKAAVLSRTK 886 +PLDTIK +LQT G +Y TFD KT + +G+ G Y G+SA L G A+ F GK + E YP + + AG+ + S+ IM P E I TQ+ Q G + + + K+ + G+ ++ G AT+LR+LPA L + +E L+ S+++ Sbjct: 34 HPLDTIKVRLQTMPRPAPGEQPLYRGTFDCAAKTIKNEGVRGLYKGMSAPLTGVAPIFAMCFAGYALGKRLQQRGEDAKLTYPQIFV---AGSFSGLFSTLIMAPGERIKVLLQTQQGQGGERKYNGMIDCAGKLYKEGGLRSVFKGSCATMLRDLPANGLYFLVYEALQDVAKSKSE 208
BLAST of FC879001 vs. ExPASy Swiss-Prot
Match: PET8_YEAST (Putative mitochondrial carrier protein PET8 OS=Saccharomyces cerevisiae GN=PET8 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.222e-13 Identity = 51/172 (29.65%), Postives = 84/172 (48.84%), Query Frame = 2 Query: 386 TYVCLYPLDTIKTKLQTKGASKMYSSTFDAIFKTFQTKGILGFYSGVSAVLVGSTASSAIYFGTCEFGK----SFLSKLEIYPSVLIPPT-----AGAMGNIVSSAIMVPKELITQRMQAGAKGRSWEVLLKILEVDGILGL----YAGYSATLLRNLPAGVLSYSSFEYLK 862 T + +P+DTIKT+LQ KG F G G Y G+ + +V S ++++F + ++ K ++SKL S + T + ++G I + + VP E++ QR Q + SW+ L IL D GL Y G+S T++R +P + + +EYLK Sbjct: 18 TDLVFFPIDTIKTRLQAKGGF-------------FANGGYKGIYRGLGSAVVASAPGASLFFISYDYMKVKSRPYISKLYSQGSEQLIDTTTHMLSSSIGEICACLVRVPAEVVKQRTQVHSTNSSWQTLQSILRNDNKEGLRKNLYRGWSTTIMREIPFTCIQFPLYEYLK 176
BLAST of FC879001 vs. ExPASy Swiss-Prot
Match: AGC1_YEAST (Mitochondrial aspartate-glutamate transporter AGC1 OS=Saccharomyces cerevisiae GN=AGC1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.557e-13 Identity = 46/165 (27.88%), Postives = 88/165 (53.33%), Query Frame = 2 Query: 398 LYPLDTIKTKLQTKGASKMYSSTFDAIFKTFQTKGILGFYSGVSAVLVGSTASSAIYFGTCEFGKSFLS----KLEIYPSVLIPPTAGAMGNIVSSAIMVPKELITQRMQAGAK------GRSWEVLLKILEVDGILGLYAGYSATLLRNLPAGVLSYSSFEYLK 862 +YP+D IKT++Q + + Y ++ D + K +GI G YSG+ L+G AI +F ++ L+ KL ++P ++ +AGA I ++ P E++ R+Q + ++ E +I++ G+ GLY G +A L+R++P + + ++ +LK Sbjct: 548 VYPIDFIKTRMQAQRSLAQYKNSIDCLLKIISREGIKGLYSGLGPQLIGVAPEKAIKLTVNDFMRNRLTDKNGKLSLFPEIISGASAGACQVIFTN----PLEIVKIRLQVQSDYVGENIQQANETATQIVKKLGLRGLYNGVAACLMRDVPFSAIYFPTYAHLK 708
BLAST of FC879001 vs. ExPASy Swiss-Prot
Match: MRS3_YEAST (Mitochondrial RNA-splicing protein MRS3 OS=Saccharomyces cerevisiae GN=MRS3 PE=1 SV=4) HSP 1 Score: 75.485 bits (184), Expect = 4.645e-13 Identity = 44/155 (28.39%), Postives = 76/155 (49.03%), Query Frame = 2 Query: 398 LYPLDTIKTKLQTKGASKMYSSTFDAIFKTFQT-KGILGFYSGVSAVLVGSTASSAIYFGTCEFGKSFLSKLEIYPSVLIPPTA--GAMGNIVSSAIMVPKELITQRMQAGAKGRSWEVLLKILEVDGILGLYAGYSATLLRNLPAGVLSYSSFE 853 ++P+D +KT++Q+ A + + + T +G L + GV +V++G+ + A+YFGT EF K L + TA GA S A+M P + I QR+Q W+ +I + +G+ Y Y TL+ N+P ++ +E Sbjct: 51 MFPIDALKTRIQSANAKSLSAKNMLSQISHISTSEGTLALWKGVQSVILGAGPAHAVYFGTYEFCKKNLIDSSDTQTHHPFKTAISGACATTASDALMNPFDTIKQRIQLNTSASVWQTTKQIYQSEGLAAFYYSYPTTLVMNIPFAAFNFVIYE 205 The following BLAST results are available for this feature:
BLAST of FC879001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >FC879001 ID=FC879001; Name=FC879001; organism=Citrus clementina; type=EST; length=895bpback to top |