FC879004

Overview
NameFC879004
Unique NameFC879004
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length926
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC879004 vs. ExPASy Swiss-Prot
Match: CD123_SCHPO (Cell division cycle protein 123 OS=Schizosaccharomyces pombe GN=cdc123 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.906e-27
Identity = 72/200 (36.00%), Postives = 108/200 (54.00%), Query Frame = 3
Query:  309 MTEEEVNRCQIQEWYPKFKSVSIRT-LIHELPEYFVEYLLDDSGPFLLPASVSNDDALPNRIHNAFEEEDYRVSEGSGDXXXXXXXXXXXXXXLKIKESIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIVLLLRSSDSLVHDLCHAYDSCN-----DKTLTRPPSFFLALRKWYPSLRPEMEFRCFVRGRCLV 890
            +T+ +V  CQ   WY  F+ ++ +  +I  +P   ++YL +DS     P              N  EE D    E S                  I+++I+ LGGAV PKLNWS PKDA WI+T+G+L+CT+  E++LLL+SSD + HDL HA+D C      D ++ +  SF L L++W+P +    EFRCFV+ + L+
Sbjct:    5 LTKNQVLHCQFSSWYSLFRKLTPKAKVIKPIPATVLKYLHEDSIYVEQPM-------------NTVEEVDSEEDEESAPAYYPEREAIQL-----IEKAIKELGGAVVPKLNWSTPKDALWITTTGSLKCTTAEEVLLLLKSSDFVAHDLNHAFDDCKDFDNADGSVPKDFSFELVLKEWFP-MHASTEFRCFVKSKRLI 185          
BLAST of FC879004 vs. ExPASy Swiss-Prot
Match: CD123_SCLS1 (Cell division cycle protein 123 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=CDC123 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 5.000e-26
Identity = 70/203 (34.48%), Postives = 113/203 (55.67%), Query Frame = 3
Query:  309 MTEEEVNRCQIQEWYPKFKSVSIRTLIHELPEYFVEYLLDDSGPFLLPASVSN----DDALPNRIHNAFEEEDYRVSEGSGDXXXXXXXXXXXXXXLKIKESIESLGGAVFPKLNWSAPKDAAWIS-TSGTLRCTSFCEIVLLLRSSDSLVHDLCHAYDSC-NDKTLTRPP-SFFLALRKWYPSLRPEMEFRCFVRGRCLVGI 896
            +T+  +  C   +W+ +++S ++++ I  L   F+ YL +D    +LP+ ++     +    N   + ++E+    S+ S                 +I+E+I  LGG+V PKLNWSAPKDA WIS    ++ C +  ++ LLL+SSD + HDL HA+D C  D +LT+    + L LRKW+  + P  EFRCFVR R ++GI
Sbjct:   25 ITKSHILNCSYDKWHAEYRSSTLKSRIIPLTPEFLSYLREDG--IVLPSEIATFPPPETYNNNSTSDGWDEDTDTESDPSEKFSEIHK---------QIQETITELGGSVVPKLNWSAPKDATWISLKQNSMECNTANDVYLLLKSSDFITHDLEHAFDGCAEDPSLTKENIQYVLVLRKWF-KVNPSCEFRCFVRDRRIIGI 215          
BLAST of FC879004 vs. ExPASy Swiss-Prot
Match: CD123_BOTFB (Cell division cycle protein 123 OS=Botryotinia fuckeliana (strain B05.10) GN=cdc123 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.529e-26
Identity = 69/199 (34.67%), Postives = 109/199 (54.77%), Query Frame = 3
Query:  309 MTEEEVNRCQIQEWYPKFKSVSIRTLIHELPEYFVEYLLDDSGPFLLPASVSNDDALPNRIHNAFEEEDYRVSEGSGDXXXXXXXXXXXXXXLKIKESIESLGGAVFPKLNWSAPKDAAWIS-TSGTLRCTSFCEIVLLLRSSDSLVHDLCHAYDSC-NDKTLTRPPS-FFLALRKWYPSLRPEMEFRCFVRGRCLVGI 896
            +T+  +  C    W+ K++S ++++ I  L   F+ YL +D    +LP+ ++     P   +N    + +     +G                +I+E+I  L G+V PKLNWSAPKDA WIS    ++ C +  +I LLL+SSD + HDL HA+D C  D ++T+  + + L LRKW+  + P  EFRCFVR R ++GI
Sbjct:   25 ITKSHILNCSYDNWHAKYRSSTLKSRIIPLTSEFLSYLREDG--IVLPSEIATFPP-PETYNNNSTSDGWDEDTDTGPDPSEKFSEIHK----QIQETIAELDGSVVPKLNWSAPKDATWISLKQNSMECNTPNDIYLLLKSSDFITHDLEHAFDGCAEDPSITKESTQYVLVLRKWF-KVNPSCEFRCFVRDRRIIGI 215          
BLAST of FC879004 vs. ExPASy Swiss-Prot
Match: CD123_CANGA (Cell division cycle protein 123 OS=Candida glabrata GN=CDC123 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.583e-24
Identity = 75/198 (37.88%), Postives = 100/198 (50.51%), Query Frame = 3
Query:  303 LGMTEEEVNRCQIQEWYPKFKS-VSIRTLIHELPEYFVEYLLDDSGPFLLPASVSNDDALPNRIHNAFEEEDYRVSEGSGDXXXXXXXXXXXXXXL-----KIKESIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIVLLLRSSDSLVHDLCHAYDSCNDKTL-TRPPSFFLALRKWYPSLRPEMEFRCFVR 875
            L +T  +++ C    WY KFK  V    +I  LPE F++YL  D     LP S +      + +    E+ +Y   EG  D                    +IKE I  LG  V PKLNWSAPKDA WI  + T +C    EI LLL +S+ +VHDL HAYD C DK      P + L LR+W+ ++ P +EFR FV+
Sbjct:   11 LPVTCSQIDNCAFSFWYEKFKKHVPKSRVIKPLPEQFIQYLEQDG--IKLPMSSTELSTYTDDVART-EDNEYSDWEGDEDTATEYEPGIEPLNDFPELHNQIKEIIVELG-PVTPKLNWSAPKDATWILPNNTTKCNEVNEIYLLLNASNYIVHDLNHAYDECIDKKEGFSTPEYELVLRQWF-AINPALEFRVFVK 203          
BLAST of FC879004 vs. ExPASy Swiss-Prot
Match: CD123_ASPCL (Cell division cycle protein 123 OS=Aspergillus clavatus GN=cdc123 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.778e-23
Identity = 70/194 (36.08%), Postives = 96/194 (49.48%), Query Frame = 3
Query:  333 CQIQEWYPKFKSVSIRTLIHELPEYFVEYLLDDSGPFLLPASVSNDDALPNRIHNAFEEEDYRVSEGSGDXXXXXXXXXXXXXXLKIKESIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIVLLLRSSDSLVHDLCHAYDSC-NDKTLTRPPS-------FFLALRKWYPSLRPEMEFRCFVRGRCLV 890
            C    W P++++++ ++ +  L + FV YL  D G  L P + S  D           E+D       G                +IK +I   GG V PKLNWSAPKDA W+S +  L+C +  +I LLL+SSD + HDL H +D C  D T T   S       + L LRK Y +  P +EFRCFVR R L+
Sbjct:   35 CSYHHWQPRYRTITPKSRLIPLTDPFVSYLRAD-GIVLPPENTSPQD-----------EDDLDTFSDDGADEEPDPSVEWQDIHSQIKSTISEFGGKVTPKLNWSAPKDAVWMSATNDLQCRTPNDIYLLLKSSDFVTHDLEHPFDDCVPDTTETTESSDAQPEIPYHLVLRK-YVNFNPALEFRCFVRNRVLL 215          
BLAST of FC879004 vs. ExPASy Swiss-Prot
Match: CD123_YARLI (Cell division cycle protein 123 OS=Yarrowia lipolytica GN=CDC123 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.033e-23
Identity = 75/208 (36.06%), Postives = 110/208 (52.88%), Query Frame = 3
Query:  294 STMLGMTEEEVNRCQIQEWYPKFKSVSIRT-LIHELPEYFVEYLLDDSGPFLLP----ASVSNDDALPNRIHNAFEEEDYRVSEGSGDXXXXXXXXXXXXXXLKIKESIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIVLLLRSSDSLVHDLCHAYDSCNDKT--LTRPPSFFLALRKWYPSLRPEMEFRCFVRGRCLVGI 896
            +T L +T E +  CQ   WY  +KS++ +T +I  LPE FV YL +D    +LP     S  +D  +     +  +E D  VS+                   K++  I+  G AV PKLNWS+P+DA WIS S + RC +  ++ LLL+SSD + HDL     +  DK   + +  SF L LRKW  ++ P +EFRCFV+ R L+ +
Sbjct:   16 TTTLTLTREHLLNCQFSAWYKLYKSITPKTRIIKPLPEDFVNYLSEDG--VILPDEEKTSYGSDSGVFEEYSDDEDELDSYVSK-------------LDDFHPKVQAVIDEFG-AVAPKLNWSSPQDAIWISPSNSTRCVTVNDVYLLLKSSDYIAHDL-----TMLDKLGGIPKDFSFELVLRKWI-NINPALEFRCFVKDRELIAV 201          
BLAST of FC879004 vs. ExPASy Swiss-Prot
Match: CD123_PHANO (Cell division cycle protein 123 OS=Phaeosphaeria nodorum GN=CDC123 PE=3 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 5.174e-23
Identity = 63/183 (34.43%), Postives = 97/183 (53.01%), Query Frame = 3
Query:  354 PKFKSVSIRTLIHELPEYFVEYLLDDSGPFLLPASVSNDDALPNRIHNAFEEEDYRVSEGSGDXXXXXXXXXXXXXXLKIKESIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIVLLLRSSDSLVHDLCHAYDSCNDKTL--TRPPSFFLALRKWYPSLRPEMEFRCFVRGRCLVGI 896
            P++++V+ +  +  LP  F++YL  D    +LP    ++    +     F   D   +    D                I+ +IE LGG V PKLNWSAPKDA W++ + ++ C +  +I LLL+SSD + HDL HA+D   D++    +   + L LRKW  +L P +EFRCFVR R L+ +
Sbjct:   16 PRYRAVTPKARLVPLPAAFLDYLRSDG--IILPPEDGDNPTWSDNDSGIFSGAD---NNDEDDEAAADPSVDWRDTHEAIERTIEELGGKVAPKLNWSAPKDATWMNATNSMECRTPNDIYLLLKSSDFVTHDLAHAFDDTADQSSEDDQEIPYHLVLRKWI-TLNPSVEFRCFVRDRRLIAL 192          
BLAST of FC879004 vs. ExPASy Swiss-Prot
Match: CD123_ASPFU (Cell division cycle protein 123 OS=Aspergillus fumigatus GN=cdc123 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.174e-23
Identity = 65/202 (32.18%), Postives = 97/202 (48.02%), Query Frame = 3
Query:  309 MTEEEVNRCQIQEWYPKFKSVSIRTLIHELPEYFVEYLLDDSGPFLLPASVSNDDALPNRIHNAFEEEDYRVSEGSGDXXXXXXXXXXXXXXLKIKESIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIVLLLRSSDSLVHDLCHAYDSC-------NDKTLTRPP-SFFLALRKWYPSLRPEMEFRCFVRGRCLV 890
            +T   +  C   +W P++++++ ++    L   FV YL             +N   LP        ++D       G                +IK +I   GG V PKLNWSAPKDA W+S +  L+C +  +I LLL+SSD + HDL H +D C       ++   T+P   ++L LRK Y +  P +EFRCFVR R L+
Sbjct:   27 VTYSHILHCSYHQWQPRYRTLTPKSRAIPLTPSFVSYLR------------ANGIVLPPETTRPHGDDDIDTFSDDGADEESDPSVEWQEIHSQIKSTISEFGGKVTPKLNWSAPKDAVWMSATNDLQCRTPNDIYLLLKSSDFITHDLEHPFDGCVPDPDDSSEAPATQPDIPYYLVLRK-YVNFNPSLEFRCFVRNRVLL 215          
BLAST of FC879004 vs. ExPASy Swiss-Prot
Match: CD123_AJECN (Cell division cycle protein 123 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=CDC123 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.174e-23
Identity = 72/218 (33.03%), Postives = 102/218 (46.79%), Query Frame = 3
Query:  309 MTEEEVNRCQIQEWYPKFKSVSIRTLIHELPEYFVEYLLDDSGPFLLPASVSNDDALPNRIHNAFEEEDYRVSEGSG-DXXXXXXXXXXXXXXLKIKESIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIVLLLRSSDSLVHDLCHAYDSCNDKTLTRPPS-----------------------FFLALRKWYPSLRPEMEFRCFVRGRCLV 890
            +    +  C    W+PK++SV+ +  +  L + F+ YL  D    +LP    N     +      +   Y +S+ S  D               +IK +IE LGG V PKLNWSAPKDA WIS +  ++C +  +I LLL+SSD + HDL HA+D C   T  +                          + L LRK Y +L P +EFRCFVR R L+
Sbjct:   20 LKRSHILHCSYHYWHPKYRSVTPKARLIPLNDAFLNYLRADG--IILPPQDENPPGADD------DSGIYSLSDDSDPDDDDVDPSIQWQEIHAQIKATIEELGGKVAPKLNWSAPKDATWISATNDMQCRTPNDIYLLLKSSDFVTHDLEHAFDGCVSDTEEKSDGEVEVEVEEGKEKEQKQAEQSRIPYHLVLRK-YITLNPSLEFRCFVRDRKLL 228          
BLAST of FC879004 vs. ExPASy Swiss-Prot
Match: CD123_EMENI (Cell division cycle protein 123 OS=Emericella nidulans GN=cdc123 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.153e-22
Identity = 74/206 (35.92%), Postives = 104/206 (50.49%), Query Frame = 3
Query:  309 MTEEEVNRCQIQEWYPKFKSVSIRTLIHELPEYFVEYLLDDSGPFLLPASV--SNDDALPNRIHNAFEEEDYRVSEGSGDXXXXXXXXXXXXXXLKIKESIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIVLLLRSSDSLVHDLCHAYDSCNDKT------LTRPP--SFFLALRKWYPSLRPEMEFRCFVRGRCLVGI 896
            +T   +  C    W PK+++++ ++ I  L   FV YL  D G  L P +   +NDD   +   +A EE D                        +IK +I  L G V PKLNWSAPKDA W++ +  L+C +  +I LLL+SSD + HDL H +D C   T      ++ PP   + L LRK Y +  P +EFRCFVR R L+ I
Sbjct:   24 VTYSHILHCSYDYWQPKYRALTPKSRIIPLTSSFVSYLHAD-GIVLPPENTPPTNDDDDFSDDPDAEEEAD--------------PSKDWPEVHAQIKSAIAELDGKVTPKLNWSAPKDATWMAATNDLQCRTPNDIYLLLKSSDFITHDLEHPFDDCVPDTSYSPAPISTPPEVKYNLVLRK-YVNFNPSLEFRCFVRNRILLCI 213          
The following BLAST results are available for this feature:
BLAST of FC879004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
CD123_SCHPO5.906e-2736.00Cell division cycle protein 123 OS=Schizosaccharom... [more]
CD123_SCLS15.000e-2634.48Cell division cycle protein 123 OS=Sclerotinia scl... [more]
CD123_BOTFB8.529e-2634.67Cell division cycle protein 123 OS=Botryotinia fuc... [more]
CD123_CANGA3.583e-2437.88Cell division cycle protein 123 OS=Candida glabrat... [more]
CD123_ASPCL1.778e-2336.08Cell division cycle protein 123 OS=Aspergillus cla... [more]
CD123_YARLI3.033e-2336.06Cell division cycle protein 123 OS=Yarrowia lipoly... [more]
CD123_PHANO5.174e-2334.43Cell division cycle protein 123 OS=Phaeosphaeria n... [more]
CD123_ASPFU5.174e-2332.18Cell division cycle protein 123 OS=Aspergillus fum... [more]
CD123_AJECN5.174e-2333.03Cell division cycle protein 123 OS=Ajellomyces cap... [more]
CD123_EMENI1.153e-2235.92Cell division cycle protein 123 OS=Emericella nidu... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AF05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA100AF05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC879004 ID=FC879004; Name=FC879004; organism=Citrus clementina; type=EST; length=926bp
CAAACAGCCGACACCAGCCACACCGACACACCTTCAGTCGTCGCTGCCTC
ACTCACAGCCATCATCACTGTCGACCGTCGCAAGCCCAGCACTGCAGCTG
CCGGCAGGCAACCACGCGAGTCGCGACGAACCTGCACCAGCAGCGGCTGC
AGCGCGACGCACGGACGCCAGCAGCAATGAACCCACTCTAAGCCTTGTAT
CCAGCATAGTAGCATACCCACGTGATCTATTGATCTTTGAGATAATAGAA
GGAGTTTCAGTGCTTTAATACATTGACCGTGCTGAGCCATTATTCTACAA
TGTTAGGAATGACAGAGGAAGAAGTTAACCGTTGCCAGATTCAAGAATGG
TACCCAAAATTTAAATCTGTGTCCATAAGAACCCTGATTCATGAGCTTCC
AGAATATTTTGTGGAGTACCTTCTTGATGATTCTGGGCCCTTTCTCCTTC
CCGCTTCCGTTTCAAATGACGATGCGCTGCCAAATAGAATCCACAATGCT
TTTGAAGAAGAGGACTATCGGGTCTCTGAAGGATCTGGAGATGAAGCAGA
ACCTTCATCTCCTCCATCTTTTCCAGAACTAGAATTAAAGATCAAGGAAT
CTATTGAATCCCTTGGGGGTGCAGTTTTCCCTAAGCTGAATTGGAGTGCA
CCAAAAGATGCCGCTTGGATCAGCACTTCTGGGACCCTTCGATGCACTTC
ATTCTGTGAGATCGTACTCTTACTACGGTCATCTGATTCCTTGGTTCATG
ATTTGTGTCATGCATATGATTCATGCAATGATAAGACCTTGACAAGACCA
CCAAGTTTCTTTCTCGCCCTCCGCAAGTGGTATCCATCCTTACGACCAGA
GATGGAGTTCCGATGTTTCGTACGTGGTCGGTGCCTAGTTGGAATTCCCA
GCGAGAGGTCACGATGTGTTATCCTG
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