FC888648

Overview
NameFC888648
Unique NameFC888648
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length833
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_NEIMU (Adenylate kinase OS=Neisseria mucosa GN=adk PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.176e-25
Identity = 63/185 (34.05%), Postives = 104/185 (56.22%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAE-ILEGVTDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKS 828
            + LG PG GKGT A  ++   G+P I+TGD++R  + +  PL  +  +I+ +G LV D+III ++ +R+   + K   GF+ DGFPRT+ QAE ++E   D+D V+ + + +  ++ +  GRR+    G  ++V     K E  +                 LI R DDKEE V++RL +Y+E++
Sbjct:    4 LLLGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGAPLGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKN--GFLFDGFPRTLAQAEAMVEAGVDLDAVVEIDVPDSVIVDRMSGRRVHLASGRTHHVTYNPPKVEGKDDV-----------TGEDLIQRDDDKEETVKKRLAVYHEQT 175          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_METCA (Adenylate kinase OS=Methylococcus capsulatus GN=adk PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.176e-25
Identity = 68/187 (36.36%), Postives = 104/187 (55.61%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILE--GVTDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKSR 831
            + LG PG GKGT A  L+   G+P I+TGD++R  +    PL  +  +I+  G+LVSD II+ L+ +R+ A +     GF+LDGFPRT+ QA+ L   GVT +D V+ + + +E ++ +  GRR+    G  Y+V     K E  +                 L+ R DDKEE +R RL IY+ +++
Sbjct:    4 MLLGSPGSGKGTQAKYLTERFGIPQISTGDMLRAAVREGTPLGMEAKKIMDAGQLVSDSIILGLIKERIAAPDCAN--GFLLDGFPRTIVQADALAELGVT-LDHVVEIAVDDEEIVRRLSGRRVHPASGRTYHVVFNPPKVEGRD-----------DETGEPLVQREDDKEETIRRRLEIYHVQTK 176          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_BACSK (Adenylate kinase OS=Bacillus clausii (strain KSM-K16) GN=adk PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.176e-25
Identity = 68/188 (36.17%), Postives = 99/188 (52.66%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEK 825
            + +G PG GKGT A ++ N  G+PHI+TGD+ R  + +   L  +    +  G LV DE+ I ++ +RL   +   E GF+LDGFPRT+ QAE LEG+       +D V+N+ + +E L+ +  GRR+    G  Y++     K E                  S LI R DDK E V+ RL + NEK
Sbjct:    4 ILMGLPGAGKGTQAEKIVNDYGIPHISTGDMFRAAMKNETELGLKAKSFIDAGDLVPDEVTIGIVKERLSEDDC--ENGFLLDGFPRTIAQAEALEGILSSLGKQLDHVLNIAVPKELLMERLTGRRVSPTTGKTYHIVYNPPKVEGKCDID-----------GSDLIQRDDDKPETVKRRLEV-NEK 177          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_RALME (Adenylate kinase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=adk PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.066e-25
Identity = 66/186 (35.48%), Postives = 102/186 (54.84%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL-EGVTDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKSR 831
            + LG PG GKGT A  +    G+P I+TGD++R  + +  PL  +  +++  G LVSD+III L+  RL+  +   E G++ DGFPRT+ QAE + E    ID V+ + +  +A++ +  GRR+    G  Y+V     K +                    LI R DDKEE VR+RL +Y++++R
Sbjct:    4 ILLGAPGAGKGTQAKFICEKFGIPQISTGDMLRAAVKAGTPLGIEAKKVMDAGGLVSDDIIIGLVKDRLKQPDC--EKGYLFDGFPRTIPQAEAMKEAGVAIDYVLEIDVPFDAIIERMSGRRVHVASGRTYHVKFNPPKAD-----------MVDDETGEALIQRDDDKEETVRKRLDVYSQQTR 176          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_HALHL (Adenylate kinase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=adk PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.066e-25
Identity = 66/187 (35.29%), Postives = 107/187 (57.22%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL--EGVTDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKSR 831
            + LG PG GKGT A+ +    G+P I+TGD++R  + +  PL  Q  +I+ +G LVSD+II+ L+ +R+   +A    GF+ DGFPRT+ QA+ L  +G+  ID V+ +++ +E ++ +  GRR+    G  Y+V     + E  +                 L+ R DD+EE VR RL +Y+E++R
Sbjct:    4 ILLGPPGAGKGTQAAHICEAFGIPQISTGDMLRAAVKAGTPLGQQAKKIMDEGGLVSDDIILGLIEERV--AQADCANGFLFDGFPRTIAQADGLNDQGIR-IDAVVEIQVPDEEIVDRMAGRRVHPGSGRVYHVTHNPPRQEGKDDV-----------TGEDLVQREDDREETVRHRLGVYHEQTR 176          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_ANAD2 (Adenylate kinase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=adk PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.066e-25
Identity = 69/189 (36.51%), Postives = 101/189 (53.44%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKS 828
            + LG PG GKGT A  LS+ LG+PHI+TGD+ RD  A    +  Q+  I+  G LV+D+I   ++ +RL   +     GFILDG+PRTV QAE L+G+       ID  ++ ++ EE ++ +  GRR C  CG  Y+V+                         + L+ R DDK E VR+R++ Y  K+
Sbjct:    4 ILLGPPGAGKGTQAKLLSSELGIPHISTGDMFRDHKARGTEIGKQVQAIMDAGGLVTDDITNAMVKERLSRPDV--APGFILDGYPRTVVQAEYLDGLLRSLGRSIDRALSYEVPEELVVERISGRRSCPRCGAVYHVS-----------QNPPHRAGFCDRDDAALVQREDDKPENVRKRMQEYGTKT 179          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_PROVI (Adenylate kinase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=adk PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.053e-24
Identity = 64/186 (34.41%), Postives = 105/186 (56.45%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL--EGVTDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKS 828
            + LG PG GKGT +  +S  LG+P I+TGD++R  +    PL  +  E++  G LVSD+II++++ +RL+  + +  +G + DGFPRT+ QAE L  EG+T I+ VI +++ + +++ +  GRR+    G  Y++                            LI R DD EE V++RL IY+E++
Sbjct:    4 ILLGAPGAGKGTQSHFISKALGIPQISTGDMLRAAVKEETPLGRKAKEVMDSGNLVSDDIILDIIKERLKEDDCR--SGCLFDGFPRTIAQAEALDREGIT-INHVIEIRVEDSSIIQRMSGRRVHPASGRTYHLT-----------FNPPQQQGVDDETGEPLIQRVDDTEETVKKRLAIYHEQT 175          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_POLSJ (Adenylate kinase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=adk PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.053e-24
Identity = 66/186 (35.48%), Postives = 103/186 (55.38%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-TDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKSR 831
            + LG PG GKGT A+ +    G+P I+TGD++R  + +  PL  +  +I+  G LVSD++IINL+ +R+   +     GF+ DGFPRT+ QA+ ++     ID V+ + +  EA++ +  GRR  +  G  Y+V     K E  +                 LI R DDKEE VR+RL +Y+ ++R
Sbjct:    4 ILLGAPGAGKGTQATFICQKYGIPQISTGDMLRAAVKAGTPLGVEAKKIMDAGALVSDDLIINLVKERIAQPDC--AKGFLFDGFPRTIPQADAMKAAGVKIDYVLEIDVPFEAIIERMSGRRSHTASGRTYHVKYNPPKVEGKDDV-----------TGEPLIQREDDKEETVRKRLEVYSAQTR 176          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_NEIGO (Adenylate kinase OS=Neisseria gonorrhoeae GN=adk PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.053e-24
Identity = 63/185 (34.05%), Postives = 103/185 (55.68%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAE-ILEGVTDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKS 828
            + LG PG GKGT A  ++   G+P I+TGD++R  + +  PL  +  +I+ +G LV D+III ++ +R+   + K   GF+ DGFPRT+ QAE ++E    +D V+ + + +  ++ +  GRR+    G  Y+V     K E  +                 LI R DDKEE V++RL +Y+E++
Sbjct:    4 LLLGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTPLGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKN--GFLFDGFPRTLAQAEAMVEAGVGLDAVVEIDVSDSVIVDRMSGRRVHLASGRTYHVTYNPPKTEGKDDV-----------TGEDLIQRDDDKEETVKKRLAVYHEQT 175          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_NEIG2 (Adenylate kinase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=adk PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.053e-24
Identity = 63/185 (34.05%), Postives = 103/185 (55.68%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAE-ILEGVTDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKS 828
            + LG PG GKGT A  ++   G+P I+TGD++R  + +  PL  +  +I+ +G LV D+III ++ +R+   + K   GF+ DGFPRT+ QAE ++E    +D V+ + + +  ++ +  GRR+    G  Y+V     K E  +                 LI R DDKEE V++RL +Y+E++
Sbjct:    4 LLLGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTPLGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKN--GFLFDGFPRTLAQAEAMVEAGVGLDAVVEIDVSDSVIVDRMSGRRVHLASGRTYHVTYNPPKTEGKDDV-----------TGEDLIQRDDDKEETVKKRLAVYHEQT 175          
The following BLAST results are available for this feature:
BLAST of FC888648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_NEIMU6.176e-2534.05Adenylate kinase OS=Neisseria mucosa GN=adk PE=3 S... [more]
KAD_METCA6.176e-2536.36Adenylate kinase OS=Methylococcus capsulatus GN=ad... [more]
KAD_BACSK6.176e-2536.17Adenylate kinase OS=Bacillus clausii (strain KSM-K... [more]
KAD_RALME8.066e-2535.48Adenylate kinase OS=Ralstonia metallidurans (strai... [more]
KAD_HALHL8.066e-2535.29Adenylate kinase OS=Halorhodospira halophila (stra... [more]
KAD_ANAD28.066e-2536.51Adenylate kinase OS=Anaeromyxobacter dehalogenans ... [more]
KAD_PROVI1.053e-2434.41Adenylate kinase OS=Prosthecochloris vibrioformis ... [more]
KAD_POLSJ1.053e-2435.48Adenylate kinase OS=Polaromonas sp. (strain JS666 ... [more]
KAD_NEIGO1.053e-2434.05Adenylate kinase OS=Neisseria gonorrhoeae GN=adk P... [more]
KAD_NEIG21.053e-2434.05Adenylate kinase OS=Neisseria gonorrhoeae (strain ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA28BE05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA28BE05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC888648 ID=FC888648; Name=FC888648; organism=Citrus clementina; type=EST; length=833bp
TCTCTCTCTCTCTCTCTCTCTCTCTCTCACAGTGGAGAATACGACATGTC
GGTATTAAGCCGTGTTTGGAGAGCGAGAGGCTCTACGGCGGCGGCGACGA
CGACGACGACGTCGTTGCAGACACTAATATTCCTGTCTCGTGCGCTCTCA
ACTTCTTGTGAAAATACCGGAATTGACCCCAAAGCAAAAGCAGGAGCAGC
GGCGGCGCTGCCGCTTAATAATAATAATAGTAAGAAGAAGAAAGAGGGGA
AGGGCGAGGGCAAACATGTCCAGTGGGTTTTTCTTGGCTGCCCAGGCGTG
GGCAAAGGTACTTATGCTTCTAGGCTGTCGAATTTGTTGGGAGTTCCTCA
CATCGCCACCGGTGATCTCGTTCGTGACGAGCTCGCTTCCTCGGGCCCAC
TCTCCTCTCAGCTTGATGAGATTGTTAGTCAGGGAAAGTTAGTTTCTGAT
GAAATTATAATAAATTTATTGTCCAAGCGTCTTGAAGCTGGTGAAGCTAA
GGGTGAAGCTGGGTTTATTCTTGATGGTTTTCCTCGAACTGTAAGACAGG
CGGAAATATTGGAGGGAGTTACTGACATTGACTTGGTGATTAACCTAAAG
CTTCGAGAGGAGGCATTGCTTGCAAAATGCCTCGGAAGAAGAATATGTAG
TGAATGTGGAGGAAACTACAACGTTGCCTGTATTGACATCAAGGGTGAAA
ATGGGAACCCTGGAATGTACATGGGTCCACTTCTTCCCCCACCACATTGT
GCATCAAAGCTTATCACTCGTTCTGATGACAAAGAAGAAGTTGTTAGAGA
GCGACTTCGCATATATAATGAGAAGAGTCGACC
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