FC888648

Overview
NameFC888648
Unique NameFC888648
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length833
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_NEIG1 (Adenylate kinase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=adk PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.053e-24
Identity = 63/185 (34.05%), Postives = 103/185 (55.68%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAE-ILEGVTDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKS 828
            + LG PG GKGT A  ++   G+P I+TGD++R  + +  PL  +  +I+ +G LV D+III ++ +R+   + K   GF+ DGFPRT+ QAE ++E    +D V+ + + +  ++ +  GRR+    G  Y+V     K E  +                 LI R DDKEE V++RL +Y+E++
Sbjct:    4 LLLGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTPLGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKN--GFLFDGFPRTLAQAEAMVEAGVGLDAVVEIDVSDSVIVDRMSGRRVHLASGRTYHVTYNPPKTEGKDDV-----------TGEDLIQRDDDKEETVKKRLAVYHEQT 175          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_HAHCH (Adenylate kinase OS=Hahella chejuensis (strain KCTC 2396) GN=adk PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.053e-24
Identity = 65/185 (35.14%), Postives = 101/185 (54.59%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL-EGVTDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKS 828
            + LG PG GKGT A  +    G+P I+TGD++R  + +  PL  ++ E+++ G LVSDE II L+  R++  +     GF+ DGFPRT+ QAE L E    ID V+ + + ++ ++ +  GRR+    G  Y+V     K E  +                 L+ R DDKEE VR+RL +Y+ ++
Sbjct:    4 ILLGAPGAGKGTQAQNIMKKFGIPQISTGDMLRAAVKAGSPLGLKVKEVMATGGLVSDETIIALVKDRIKEDDCAN--GFLFDGFPRTIPQAEALREAGVKIDHVVEIAVDDQEIIKRLSGRRVHEASGRVYHVDYNPPKVEGKDDV-----------TGEPLVQREDDKEETVRKRLEVYHSQT 175          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD1_VANPO (Adenylate kinase 1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=ADK1 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.053e-24
Identity = 67/192 (34.90%), Postives = 106/192 (55.21%), Query Frame = 1
Query:  268 VQWVFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKS 828
            ++ V +G PG GKGT A  L    G  H++TGD++R ++A   PL  +  +I+ QG LVSDEI++ ++ + LE   A G+ GFILDGFPRT+ QAE L+ +     T ++  + LK+ +E L+A+  GR +    G +Y+      K E  +                 L+ RSDD  E + +RL  Y++++
Sbjct:    8 IRMVLIGPPGAGKGTQAPNLVKQFGAAHLSTGDMLRSQVAKGTPLGVEAKKIMDQGGLVSDEIMVGMIKQELETNPACGK-GFILDGFPRTIPQAEKLDQMLAERGTPLEKAVELKVDDELLVARITGRLVHPSSGRSYHKLFNPPKVEMTDDV-----------TGEPLVQRSDDNAEALMKRLNSYHQQT 187          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_RALPJ (Adenylate kinase OS=Ralstonia pickettii (strain 12J) GN=adk PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.376e-24
Identity = 65/186 (34.95%), Postives = 100/186 (53.76%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL-EGVTDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKSR 831
            + LG PG GKGT A  +    G+P I+TGD++R  + +  PL  +  +++  G LVSD+III L+  RL+  + K   G++ DGFPRT+ QAE + +    ID V+ + +  +A++ +  GRR+    G  Y+V     K E                    LI R DDKE+ VR+RL +Y  ++R
Sbjct:    4 ILLGAPGAGKGTQAKFICEKFGIPQISTGDMLRAAVKAGTPLGIEAKKVMDAGGLVSDDIIIGLVKDRLQQPDCKN--GYLFDGFPRTIPQAEAMKDAAVAIDYVLEIDVPFDAIIERMSGRRVHVASGRTYHVKYNPPKTEG-----------VDDESGEPLIQRDDDKEDTVRKRLDVYENQTR 176          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_PELPB (Adenylate kinase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=adk PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.376e-24
Identity = 66/191 (34.55%), Postives = 106/191 (55.50%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL--EGVTDIDLVINLKLREEALLAKCLGRRICSECGGNYNVA-----CIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKS 828
            + LG PGVGKGT ++ +S   G+P I+TGD++R  + +  PL     +++  G+LVSDEIII L+ +RL   +     G + DGFPRT+ QAE L  +G+  ID ++ + + ++ ++ +  GRR+    G  Y+V+      +DI  E G                  L  R DD+EE V++RL IY+ ++
Sbjct:    4 ILLGAPGVGKGTQSNYISKTFGIPQISTGDMLRSAVKAGTPLGVAAKKVMDSGQLVSDEIIIALVKERLTKSDCSN--GCLFDGFPRTLTQAEALRKDGI-HIDYIVEIDVEDKEIIERMSGRRVHLASGRTYHVSFNPPKTVDIDDETG----------------EPLTQREDDREETVKKRLEIYHAQT 175          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_METTP (Adenylate kinase OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=adk PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.376e-24
Identity = 63/190 (33.16%), Postives = 105/190 (55.26%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKSR 831
            V LG PG GKGT A  ++    V HI+TGD++R+ + +   L  +  + +  G+LV D I+I ++  RL   +  G  G++LDG+PRT+ QAE L+ +       ID+V+N+ + +E L+ +  GRR+C +CG +Y++     K                  C  +L  R DDKEE +  RL++Y ++++
Sbjct:    4 VLLGPPGSGKGTQAKMIAEKFNVKHISTGDILREHVRNGTELGKEAKKYMDAGQLVPDSILIGIIKDRLSKPDVAG--GYMLDGYPRTIPQAEALDKILPELKQKIDVVLNIDVPDEELVRRLSGRRMC-KCGRSYHIIFNPPK-----------VPGKCDECGGELYHRDDDKEEAILNRLKVYKQQTQ 179          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_VIBSL (Adenylate kinase OS=Vibrio splendidus (strain LGP32) GN=adk PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.797e-24
Identity = 63/185 (34.05%), Postives = 102/185 (55.14%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-TDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKS 828
            + LG PG GKGT A+ + N  G+P I+TGD++R  + +   L  Q   ++  G+LVSDEII+ L+ +R+   +   E GF+LDGFPRT+ QA+ L+ +   +D V+   + ++ ++ +  GRR     G  Y+      K E  +                +L+ R DDKEE VR RL +Y++++
Sbjct:    4 ILLGAPGAGKGTQANFIMNKFGIPQISTGDMLRAAIKAGTELGKQAKSVIDAGQLVSDEIILGLIKERIAQDDC--EKGFLLDGFPRTIPQADGLKEMGIAVDYVVEFDVADDVIVERMAGRRAHLPSGRTYHNVYNPPKEEGKDDI-----------TGEELVVRDDDKEETVRARLGVYHDQT 175          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_SALAI (Adenylate kinase OS=Salinispora arenicola (strain CNS-205) GN=adk PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.797e-24
Identity = 69/189 (36.51%), Postives = 99/189 (52.38%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKS 828
            V +G PG GKGT A  ++  L VP I+TGD+ R  ++   PL  Q    +  G+LV DE+ IN++  RL   E     GF+LDGFPRT  QA  L+ +     T +DLV+ L + ++ ++ +  GRR C  CG  ++V   D   + G              C ++L  R DDK E V  RLR Y +K+
Sbjct:    4 VLVGPPGAGKGTQAEFVAAHLAVPKISTGDIFRSNVSQGTPLGVQAKRYMDAGELVPDEVTINMVRDRL--AEPDASEGFLLDGFPRTTPQAAALDKLLVDLGTALDLVLELVVDDDEVIRRLSGRRTCRGCGKVWHVE-FDAPSQEGR----------CDRCGAELFQRDDDKPETVATRLREYADKT 179          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_PSEHT (Adenylate kinase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=adk PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.797e-24
Identity = 67/185 (36.22%), Postives = 105/185 (56.76%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL-EGVTDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKS 828
            + LG PG GKGT A  L +  G+P I+TGD++R  +    PL  +  +++  G+L+SD+III L+ +R+   +A  E GF+LDGFPRT+ QA+ + E    +D VI   + +E ++ +  GRR+    G  Y+V     K  + +                +LI R+DD EE VR+RL IY+E++
Sbjct:    4 ILLGAPGAGKGTQAQYLMDKYGIPQISTGDMLRAAIKEGTPLGLEAKKVMDAGQLISDDIIIGLVKERIT--KADCENGFLLDGFPRTIPQADAMKENGVVVDHVIEFDVADEVIVERMGGRRVHPGSGRVYHVVYNPPKVADKD-----------NETGEELIIRADDTEETVRKRLGIYHEQT 175          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_GEOSF (Adenylate kinase OS=Geobacter sp. (strain FRC-32) GN=adk PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.797e-24
Identity = 64/185 (34.59%), Postives = 95/185 (51.35%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIY 816
            + LG PG GKGT A  L     +P I+TGD++R  +    P+  +    +  G LV DE+++ ++ +RL   +     GFILDGFPRTV QA+ L  V       ID VI++ +  E LL +  GRR C  CG  ++V+    K                  C+ +L  R DD+E+ +R+RL +Y
Sbjct:    4 ILLGPPGAGKGTQAKLLIKKYRIPQISTGDILRAAVKDMTPMGGKAKSFMDAGALVPDEVVVGIIQERLNLADCSN--GFILDGFPRTVAQADALAKVLSGLGRSIDHVISIVVDNEELLERVTGRRTCRNCGKGFHVSFDPPKSSG-----------ICDECSGELYQRDDDREDTMRKRLEVY 175          
The following BLAST results are available for this feature:
BLAST of FC888648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_NEIG11.053e-2434.05Adenylate kinase OS=Neisseria gonorrhoeae (strain ... [more]
KAD_HAHCH1.053e-2435.14Adenylate kinase OS=Hahella chejuensis (strain KCT... [more]
KAD1_VANPO1.053e-2434.90Adenylate kinase 1 OS=Vanderwaltozyma polyspora (s... [more]
KAD_RALPJ1.376e-2434.95Adenylate kinase OS=Ralstonia pickettii (strain 12... [more]
KAD_PELPB1.376e-2434.55Adenylate kinase OS=Pelodictyon phaeoclathratiform... [more]
KAD_METTP1.376e-2433.16Adenylate kinase OS=Methanosaeta thermophila (stra... [more]
KAD_VIBSL1.797e-2434.05Adenylate kinase OS=Vibrio splendidus (strain LGP3... [more]
KAD_SALAI1.797e-2436.51Adenylate kinase OS=Salinispora arenicola (strain ... [more]
KAD_PSEHT1.797e-2436.22Adenylate kinase OS=Pseudoalteromonas haloplanktis... [more]
KAD_GEOSF1.797e-2434.59Adenylate kinase OS=Geobacter sp. (strain FRC-32) ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA28BE05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA28BE05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC888648 ID=FC888648; Name=FC888648; organism=Citrus clementina; type=EST; length=833bp
TCTCTCTCTCTCTCTCTCTCTCTCTCTCACAGTGGAGAATACGACATGTC
GGTATTAAGCCGTGTTTGGAGAGCGAGAGGCTCTACGGCGGCGGCGACGA
CGACGACGACGTCGTTGCAGACACTAATATTCCTGTCTCGTGCGCTCTCA
ACTTCTTGTGAAAATACCGGAATTGACCCCAAAGCAAAAGCAGGAGCAGC
GGCGGCGCTGCCGCTTAATAATAATAATAGTAAGAAGAAGAAAGAGGGGA
AGGGCGAGGGCAAACATGTCCAGTGGGTTTTTCTTGGCTGCCCAGGCGTG
GGCAAAGGTACTTATGCTTCTAGGCTGTCGAATTTGTTGGGAGTTCCTCA
CATCGCCACCGGTGATCTCGTTCGTGACGAGCTCGCTTCCTCGGGCCCAC
TCTCCTCTCAGCTTGATGAGATTGTTAGTCAGGGAAAGTTAGTTTCTGAT
GAAATTATAATAAATTTATTGTCCAAGCGTCTTGAAGCTGGTGAAGCTAA
GGGTGAAGCTGGGTTTATTCTTGATGGTTTTCCTCGAACTGTAAGACAGG
CGGAAATATTGGAGGGAGTTACTGACATTGACTTGGTGATTAACCTAAAG
CTTCGAGAGGAGGCATTGCTTGCAAAATGCCTCGGAAGAAGAATATGTAG
TGAATGTGGAGGAAACTACAACGTTGCCTGTATTGACATCAAGGGTGAAA
ATGGGAACCCTGGAATGTACATGGGTCCACTTCTTCCCCCACCACATTGT
GCATCAAAGCTTATCACTCGTTCTGATGACAAAGAAGAAGTTGTTAGAGA
GCGACTTCGCATATATAATGAGAAGAGTCGACC
back to top