FC888648

Overview
NameFC888648
Unique NameFC888648
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length833
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_BURCA (Adenylate kinase OS=Burkholderia cenocepacia (strain AU 1054) GN=adk PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.424e-21
Identity = 61/186 (32.80%), Postives = 96/186 (51.61%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL-EGVTDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKSR 831
            + LG PG GKGT A+ +    G+P I+TGD++R  + +  PL  +    +  GKLV D +II L+ +RL+  +     G++ DGFPRT+ QA+ + E    ID V+ + +    ++ +  GRR     G  Y+V     K E  +                 LI R DDKEE V++RL +Y  +++
Sbjct:    4 ILLGAPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGTPLGVEAKGYMDAGKLVPDALIIGLVKERLKESDCAN--GYLFDGFPRTIAQADAMKEAGVAIDYVLEIDVPFSEIIERMSGRRTHPASGRTYHVKFNPPKVEGHDDV-----------TGEPLIQRDDDKEETVKKRLEVYEAQTK 176          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_PHYAS (Adenylate kinase OS=Phytoplasma australiense GN=adk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.859e-21
Identity = 64/189 (33.86%), Postives = 100/189 (52.91%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILE-----GVTDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKS 828
            + LG PG+GKGT A+ LS+LL + H+ATGD+ R     + PL  +  + +++G LV DEI   +++  L   +    + F+LDGFPR V QA+ LE         ++ VI     ++ L+ +  GRRICS CG  Y++  +  K E                   KLI R DDK     +RL+++N+++
Sbjct:    4 ILLGPPGIGKGTQAAVLSDLLKLQHVATGDIFRKNFQENTPLGKESKKFINKGLLVPDEITNQMIADYL--SQIVPHSNFLLDGFPRNVFQAQFLETFFTKSNLHLNKVIYFNAFKQDLMKRIEGRRICSHCGKVYHLDNLPPKIEG-----------ICDKDQKKLIQREDDKPNTFLKRLKVFNQET 179          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_BUCAP (Adenylate kinase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=adk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.859e-21
Identity = 60/185 (32.43%), Postives = 98/185 (52.97%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-TDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKS 828
            + LG PG GKGT A  ++    +P I+TGD++R+ +     +  ++  I+  G+LVS+ I+ NL+ +R++  +     GF+LDGFPRT +QAE +  +   ID V+ L +  E +L +  GRR+ +  G  YN+     + E  +                KL  R DD  E+V++RL  Y + S
Sbjct:    4 ILLGAPGTGKGTQAKLITENYNIPKISTGDILRENIQKKNTIGKKIHNILKNGELVSNRIVCNLIGERIQKKDC--IHGFLLDGFPRTQKQAEYISNLKIKIDYVLELIVPYELILKRICGRRVHTPSGRIYNINYNPPREEGKDDL-----------TQEKLTIREDDTIEIVKKRLENYEKNS 175          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_AGRVS (Adenylate kinase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=adk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.859e-21
Identity = 59/190 (31.05%), Postives = 102/190 (53.68%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCAS-KLITRSDDKEEVVRERLRIYNEKS 828
            + LG PG GKGT A R+ +  G+P ++TGD++R  +++   +  +   ++  GKLVSD+I+I ++S+R++  +     GFILDGFPRT+ QA+  E +      ++  V+ +++ +E L  +  GR  C+ CG  Y+   +  K E                C S     R DD  + V+ RL+ Y +++
Sbjct:    4 ILLGPPGAGKGTQAQRIVDKYGIPQLSTGDMLRAAVSAQTEVGKRAKAVMDAGKLVSDDIVIAIVSERIDQDDCSN--GFILDGFPRTLIQADATEKMLAVKGLELSAVVEIRVEDEILADRIAGRYTCANCGTGYHDENLKPKVEG-----------VCDKCGSTHFKRRPDDNRDTVKTRLQAYYKET 180          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_AGRRK (Adenylate kinase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=adk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.859e-21
Identity = 62/190 (32.63%), Postives = 101/190 (53.16%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCAS-KLITRSDDKEEVVRERLRIYNEKS 828
            + LG PG GKGT A R+    G+P ++TGD++R  +A+   +  +   ++  GKLVSD+I+  ++S+R++  +     GFILDGFPRT+ QA+  E +      ++  VI +K+ +  L  +  GR  C+ CG  Y+   +  K E                C S     R+DD  E V ERL++Y +++
Sbjct:    4 ILLGPPGAGKGTQAQRIVEKHGIPQLSTGDMLRAAVAAGTEVGKRAKAVMDAGKLVSDDIVNAIVSERIDQPDC--ARGFILDGFPRTLVQADATEAMLKAKGLELSAVIEIKVDDAVLADRISGRYTCANCGAGYHDENLRPKVEG-----------VCDRCGSTHFKRRADDNRETVVERLQVYYKET 180          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD2_AEDAE (Adenylate kinase 2, mitochondrial OS=Aedes aegypti GN=Adk2 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.859e-21
Identity = 64/198 (32.32%), Postives = 104/198 (52.53%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALLAKCLGRRICSECGGNYN--------VACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKSR 831
            + LG PG GKGT A  L     V H++TGD++R E+A+   L +QL +++ +GKLVSD+++++++   L+  E K   GF+LDGFPRTV QAE L+ +     T +D V+   + +  L+ +  GR I    G +Y+            D+ GE                    L+ RSDD    + +RL  Y+++++
Sbjct:   23 ILLGPPGSGKGTQAPLLKEKFCVCHLSTGDMLRAEIAAGSKLGAQLKKVMDEGKLVSDDLVVDMIDSNLDKPECKN--GFLLDGFPRTVVQAEKLDDLLEKRKTGLDAVVEFGIDDSLLVRRITGRLIHQASGRSYHEEFAPPKVAMTDDVTGE-------------------PLMRRSDDNAAALVKRLEAYHKQTK 199          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD1_PENMA (Adenylate kinase 1 OS=Penicillium marneffei GN=adk1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.859e-21
Identity = 64/189 (33.86%), Postives = 100/189 (52.91%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGVTD-----IDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKS 828
            + +G PG GKGT A RL     V H+ATGD++R ++A   PL  +  +I+ QG LVSDEI++N++   LE   ++ + GFILDGFPRTV QAE L+ +       +   + L++ +  L+A+  GR +    G +Y+      K +  +                 LI RSDD    + +RL  Y+ ++
Sbjct:   49 ILIGPPGAGKGTQAPRLKEKYCVCHLATGDMLRSQVAKKTPLGKEAKKIMDQGGLVSDEIMVNMIKSELET-NSECKNGFILDGFPRTVAQAERLDDMLSARNEKLQHAVELQIDDALLVARITGRLVHPASGRSYHKIFNPPKQDMKDDI-----------TGEPLIQRSDDNAATLEKRLATYHAQT 225          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD1_ASPNC (Adenylate kinase 1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=adk1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.859e-21
Identity = 64/189 (33.86%), Postives = 102/189 (53.97%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGVTD-----IDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKS 828
            + +G PG GKGT A RL     V H+ATGD++R ++A    L  +  +I+ QG LVSDEI++N++   L+   A+ + GFILDGFPRTV QAE L+ + +     +   + L++ +  L+A+  GR +    G +Y+      K E  +                 LI RSDD  + +++RL  Y+ ++
Sbjct:   46 ILMGPPGAGKGTQAPRLKEKYCVCHLATGDMLRSQVAKKTALGKEAKKIMDQGGLVSDEIMVNMIQSELD-NNAECKNGFILDGFPRTVAQAERLDDMLNARQQKLQHAVELQIDDALLVARITGRLVHPASGRSYHKIFNPPKEEMKDDV-----------TGEPLIQRSDDNADTLKKRLGTYHAQT 222          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD1_AJECN (Adenylate kinase 1 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=ADK1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.859e-21
Identity = 64/200 (32.00%), Postives = 106/200 (53.00%), Query Frame = 1
Query:  268 VQWVFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGVTD-----IDLVINLKLREEALLAKCLGRRICSECGGNYN--------VACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKS 828
            V+ + +G PG GKGT A ++ +   V H+ATGD++R ++A    L  +  +I+ QG LVSDEI++N++   LE    + + GFILDGFPRTV QAE L+ + +     +   + L++ +  L+A+  GR +    G +Y+            D+ GE                    LI RSDD  + +++RL+ Y+ ++
Sbjct:   46 VRMILMGPPGAGKGTQAPKIKDKFCVCHLATGDMLRSQVARKTELGKEAKKIMDQGGLVSDEIMVNMIKHELE-NNKECQNGFILDGFPRTVAQAERLDSMLNSRGQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKEAMKDDVTGE-------------------PLIQRSDDNADALKKRLKTYHSQT 225          
BLAST of FC888648 vs. ExPASy Swiss-Prot
Match: KAD_STRM5 (Adenylate kinase OS=Stenotrophomonas maltophilia (strain R551-3) GN=adk PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.429e-21
Identity = 64/189 (33.86%), Postives = 95/189 (50.26%), Query Frame = 1
Query:  277 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALLAKCLGRRICSECGGNYNVACIDIKGENGNXXXXXXXXXXXXHCASKLITRSDDKEEVVRERLRIYNEKS 828
            V LG PG GKGT A+RL   LG+ HI+TGD++R E+A+   L  Q   ++  G LVSD+I++ +L  RL   +A    GFILDG+PR V QA  ++G+       +D V+ L +  E L+ +  GR                                      +K   R+DD  E VR+RL++YN+++
Sbjct:    4 VLLGPPGSGKGTQATRLKEKLGIAHISTGDMLRAEIAAGSELGKQAKAVMDAGNLVSDDILLGMLESRLT--QADVAKGFILDGYPRNVAQANAMDGLLAKIGQPLDAVVQLDVATELLVDRIAGR--------------------------------------AKEQGRADDSPEAVRQRLQVYNDQT 152          
The following BLAST results are available for this feature:
BLAST of FC888648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_BURCA1.424e-2132.80Adenylate kinase OS=Burkholderia cenocepacia (stra... [more]
KAD_PHYAS1.859e-2133.86Adenylate kinase OS=Phytoplasma australiense GN=ad... [more]
KAD_BUCAP1.859e-2132.43Adenylate kinase OS=Buchnera aphidicola subsp. Sch... [more]
KAD_AGRVS1.859e-2131.05Adenylate kinase OS=Agrobacterium vitis (strain S4... [more]
KAD_AGRRK1.859e-2132.63Adenylate kinase OS=Agrobacterium radiobacter (str... [more]
KAD2_AEDAE1.859e-2132.32Adenylate kinase 2, mitochondrial OS=Aedes aegypti... [more]
KAD1_PENMA1.859e-2133.86Adenylate kinase 1 OS=Penicillium marneffei GN=adk... [more]
KAD1_ASPNC1.859e-2133.86Adenylate kinase 1 OS=Aspergillus niger (strain CB... [more]
KAD1_AJECN1.859e-2132.00Adenylate kinase 1 OS=Ajellomyces capsulata (strai... [more]
KAD_STRM52.429e-2133.86Adenylate kinase OS=Stenotrophomonas maltophilia (... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA28BE05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA28BE05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC888648 ID=FC888648; Name=FC888648; organism=Citrus clementina; type=EST; length=833bp
TCTCTCTCTCTCTCTCTCTCTCTCTCTCACAGTGGAGAATACGACATGTC
GGTATTAAGCCGTGTTTGGAGAGCGAGAGGCTCTACGGCGGCGGCGACGA
CGACGACGACGTCGTTGCAGACACTAATATTCCTGTCTCGTGCGCTCTCA
ACTTCTTGTGAAAATACCGGAATTGACCCCAAAGCAAAAGCAGGAGCAGC
GGCGGCGCTGCCGCTTAATAATAATAATAGTAAGAAGAAGAAAGAGGGGA
AGGGCGAGGGCAAACATGTCCAGTGGGTTTTTCTTGGCTGCCCAGGCGTG
GGCAAAGGTACTTATGCTTCTAGGCTGTCGAATTTGTTGGGAGTTCCTCA
CATCGCCACCGGTGATCTCGTTCGTGACGAGCTCGCTTCCTCGGGCCCAC
TCTCCTCTCAGCTTGATGAGATTGTTAGTCAGGGAAAGTTAGTTTCTGAT
GAAATTATAATAAATTTATTGTCCAAGCGTCTTGAAGCTGGTGAAGCTAA
GGGTGAAGCTGGGTTTATTCTTGATGGTTTTCCTCGAACTGTAAGACAGG
CGGAAATATTGGAGGGAGTTACTGACATTGACTTGGTGATTAACCTAAAG
CTTCGAGAGGAGGCATTGCTTGCAAAATGCCTCGGAAGAAGAATATGTAG
TGAATGTGGAGGAAACTACAACGTTGCCTGTATTGACATCAAGGGTGAAA
ATGGGAACCCTGGAATGTACATGGGTCCACTTCTTCCCCCACCACATTGT
GCATCAAAGCTTATCACTCGTTCTGATGACAAAGAAGAAGTTGTTAGAGA
GCGACTTCGCATATATAATGAGAAGAGTCGACC
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