FC888657

Overview
NameFC888657
Unique NameFC888657
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length841
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6839 contig Ccv1_Contig6839:19..858. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC888657 vs. ExPASy Swiss-Prot
Match: 1433A_HORVU (14-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 372.089 bits (954), Expect = 2.163e-102
Identity = 192/234 (82.05%), Postives = 207/234 (88.46%), Query Frame = 2
Query:  134 REENVYMAKLAEQAERYEEMVEFMXXXXXXXXXXXXXXXXXRNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 835
            REENVYMAKLAEQAERYEEMVEFM                 RNLLSVAYKNVIGARRASWRIISSIEQKEESRGNE +V++I++YR++IETELS ICDGILKLLDS L+P A++ +SKVFYLKMKGDYHRYLAEFK GAERKEAAE+TL AYK+AQDIA A+L  THPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELD+LGEESYKDSTLIMQLLRDNLTLWTSD
Sbjct:    8 REENVYMAKLAEQAERYEEMVEFMEKVAKTADVGELTVEE-RNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRTRIETELSKICDGILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKAGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDSLGEESYKDSTLIMQLLRDNLTLWTSD 240          
BLAST of FC888657 vs. ExPASy Swiss-Prot
Match: 14331_MAIZE (14-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=1 SV=1)

HSP 1 Score: 370.163 bits (949), Expect = 8.221e-102
Identity = 190/235 (80.85%), Postives = 207/235 (88.09%), Query Frame = 2
Query:  134 REENVYMAKLAEQAERYEEMVEFMXXXXXXXXXXXXXXXXXRNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDM 838
            REENVYMAKLAEQAERYEEMVEFM                 RNLLSVAYKNVIGARRASWRIISSIEQKEE RGNED V+ I+DYR KIETEL+ ICDGILKLL++ L+P +++ +SKVFYLKMKGDY+RYLAEFKTGAERK+AAE+T+ AYKAAQDIA AELAPTHPIRLGLALNFSVFYYEILNSPDRAC+LAKQAFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+
Sbjct:    8 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEE-RNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNEDRVTLIKDYRGKIETELTKICDGILKLLETHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDI 241          
BLAST of FC888657 vs. ExPASy Swiss-Prot
Match: 14332_MAIZE (14-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE=2 SV=2)

HSP 1 Score: 369.392 bits (947), Expect = 1.402e-101
Identity = 190/235 (80.85%), Postives = 206/235 (87.66%), Query Frame = 2
Query:  134 REENVYMAKLAEQAERYEEMVEFMXXXXXXXXXXXXXXXXXRNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDM 838
            REENVYMAKLAEQAERYEEMVEFM                 RNLLSVAYKNVIGARRASWRIISSIEQKEE RGNED V+ I+DYR KIETEL+ ICDGILKLL+S L+P +++ +SKVFYLKMKGDY+RYLAEFKTGAERK+AAE+T+ AYKAAQDIA AELAPTHPIRLGLALNFSVFYYEILNSPDRAC+LAKQAFDEAI+ELDTL EESYKDSTLIMQLL DNLTLWTSD+
Sbjct:    8 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEE-RNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLSEESYKDSTLIMQLLHDNLTLWTSDI 241          
BLAST of FC888657 vs. ExPASy Swiss-Prot
Match: 1433B_HORVU (14-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 9.090e-101
Identity = 189/242 (78.10%), Postives = 207/242 (85.54%), Query Frame = 2
Query:  113 ATPTPSPREENVYMAKLAEQAERYEEMVEFMXXXXXXXXXXXXXXXXXRNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDM 838
            A P    REENVYMAKLAEQAERYEEMVEFM                 RNLLSVAYKNVIGARRASWRIISSIEQKEESRGNED V+ I+DYR KIE EL+ ICDGILKLLDS L+P +++ +SKVFYLKMKGDY+RYLAEFK+G ERK+AAE+T+ AYKAAQ+IA AEL PTHPIRLGLALNFSVFYYEILNSPDRAC+LAKQAFDEAI+ELD+L EESYKDSTLIMQLLRDNLTLWTSD+
Sbjct:    2 AQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEE-RNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIEVELTKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKSGTERKDAAENTMVAYKAAQEIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACDLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDI 242          
BLAST of FC888657 vs. ExPASy Swiss-Prot
Match: 14334_ORYSJ (14-3-3-like protein GF14-D OS=Oryza sativa subsp. japonica GN=GF14D PE=2 SV=1)

HSP 1 Score: 364.385 bits (934), Expect = 4.511e-100
Identity = 188/243 (77.37%), Postives = 203/243 (83.54%), Query Frame = 2
Query:  116 TPTPSPREENVYMAKLAEQAERYEEMVEFMXXXXXXXXXXXXXXXXX---RNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 835
            +P    REE+VY AKLAEQAERYEEMVE+M                    RNLLSVAYKNVIGARRASWRIISSIEQKEE RGN+ H +TIR YR KIE EL+ ICDGIL LLDS L+P A + +SKVFYLKMKGDYHRYLAEFK+G ERK+AAEST+ AYKAAQDIA A+LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI+ELD+LGEESYKDSTLIMQLLRDNLTLWTSD
Sbjct:    2 SPAEPTREESVYKAKLAEQAERYEEMVEYMERVARAAGGASGGEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAELARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLRDNLTLWTSD 244          
BLAST of FC888657 vs. ExPASy Swiss-Prot
Match: 1433_SPIOL (14-3-3-like protein (Fragment) OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 362.844 bits (930), Expect = 1.313e-99
Identity = 182/195 (93.33%), Postives = 189/195 (96.92%), Query Frame = 2
Query:  257 RNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ 841
            RNLLSVAYKNV+GARRASWRIISSIEQKEESRGNEDHVS IRDYRS+IE ELS  CDGILKLLD++L+P ASSGDSKVFYLKMKGDYHRYLAEFKTGA+RKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF EAIAELDTLGE+SYKDSTLIMQLLRDNLTLWTSDMQ
Sbjct:    1 RNLLSVAYKNVVGARRASWRIISSIEQKEESRGNEDHVSVIRDYRSRIEKELSDNCDGILKLLDTKLVPAASSGDSKVFYLKMKGDYHRYLAEFKTGAQRKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFVEAIAELDTLGEDSYKDSTLIMQLLRDNLTLWTSDMQ 195          
BLAST of FC888657 vs. ExPASy Swiss-Prot
Match: 14338_ARATH (14-3-3-like protein GF14 kappa OS=Arabidopsis thaliana GN=GRF8 PE=2 SV=2)

HSP 1 Score: 362.844 bits (930), Expect = 1.313e-99
Identity = 183/240 (76.25%), Postives = 206/240 (85.83%), Query Frame = 2
Query:  122 TPSPREENVYMAKLAEQAERYEEMVEFMXXXXXXXXXXXXXXXXXRNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ 841
            T   R++ VYMAKLAEQAERYEEMV+FM                 RNLLSVAYKNVIG+ RA+WRI+SSIEQKEESR NE+HVS ++DYRSK+ETELSSIC GIL+LLDS LIP A++ +SKVFYLKMKGDYHRYLAEFK+G ERK AAE T+ AYKAAQD+A A+LAPTHPIRLGLALNFSVFYYEILNS ++AC++AKQAF+EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ
Sbjct:    3 TTLSRDQYVYMAKLAEQAERYEEMVQFMEQLVSGATPAGELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVSLVKDYRSKVETELSSICSGILRLLDSHLIPSATASESKVFYLKMKGDYHRYLAEFKSGDERKTAAEDTMIAYKAAQDVAVADLAPTHPIRLGLALNFSVFYYEILNSSEKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ 242          
BLAST of FC888657 vs. ExPASy Swiss-Prot
Match: 14336_ARATH (14-3-3-like protein GF14 lambda OS=Arabidopsis thaliana GN=GRF6 PE=1 SV=1)

HSP 1 Score: 362.844 bits (930), Expect = 1.313e-99
Identity = 181/236 (76.69%), Postives = 204/236 (86.44%), Query Frame = 2
Query:  134 REENVYMAKLAEQAERYEEMVEFMXXXXXXXXXXXXXXXXXRNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ 841
            R++ VYMAKLAEQAERYEEMV+FM                 RNLLSVAYKNVIG+ RA+WRI+SSIEQKEESR N++HVS ++DYRSK+E+ELSS+C GILKLLDS LIP A + +SKVFYLKMKGDYHRY+AEFK+G ERK AAE T+ AYKAAQDIA A++APTHPIRLGLALNFSVFYYEILNS D+ACN+AKQAF+EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ
Sbjct:    7 RDQYVYMAKLAEQAERYEEMVQFMEQLVTGATPAEELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNDEHVSLVKDYRSKVESELSSVCSGILKLLDSHLIPSAGASESKVFYLKMKGDYHRYMAEFKSGDERKTAAEDTMLAYKAAQDIAAADMAPTHPIRLGLALNFSVFYYEILNSSDKACNMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ 242          
BLAST of FC888657 vs. ExPASy Swiss-Prot
Match: 14331_ORYSJ (14-3-3-like protein GF14-A OS=Oryza sativa subsp. japonica GN=GF14A PE=2 SV=1)

HSP 1 Score: 359.762 bits (922), Expect = 1.111e-98
Identity = 189/249 (75.90%), Postives = 206/249 (82.73%), Query Frame = 2
Query:  101 MAAAATPTPSPREENVYMAKLAEQAERYEEMVEFMXXXXXXXXXXXXXXXXX--RNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ 841
            MAAAA      REE VYMAKLAEQAERYEEMVEFM                   RNLLSVAYKNVIGARRASWRI+SSIEQKEE RG   H +  R YR+++E ELS+IC GIL+LLD RL+P A++ D+KVFYLKMKGDYHRYLAEFKTGAERK+AA++TL AY+AAQDIA  EL+PTHPIRLGLALNFSVFYYEILNSPDRAC LAKQAFDEAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ
Sbjct:    1 MAAAAGG--GTREEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAKVFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ 247          
BLAST of FC888657 vs. ExPASy Swiss-Prot
Match: 1433_CHLRE (14-3-3-like protein OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 358.221 bits (918), Expect = 3.233e-98
Identity = 187/236 (79.24%), Postives = 201/236 (85.17%), Query Frame = 2
Query:  134 REENVYMAKLAEQAERYEEMVEFMXXXXXXXXXXXXXXXXXRNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ 841
            REE VYMAKLAEQAERY+EMVE M                 RNLLSVAYKNVIGARRASWRIISSIEQKEE++GNE+HV  IR YR+ +E ELS IC  IL+LLD  LIP AS+G+SKVFYLKMKGDYHRYLAEFKTGA+RKEAAE TL AYKAAQDIA  +L PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+LGEESYKDSTLIMQLLRDNLTLWTSDMQ
Sbjct:    5 REECVYMAKLAEQAERYDEMVEEMKKVAKLVHDQELSVEE-RNLLSVAYKNVIGARRASWRIISSIEQKEEAKGNEEHVQRIRKYRTVVEEELSKICASILQLLDDHLIPTASTGESKVFYLKMKGDYHRYLAEFKTGADRKEAAEHTLLAYKAAQDIALVDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLGEESYKDSTLIMQLLRDNLTLWTSDMQ 239          
The following BLAST results are available for this feature:
BLAST of FC888657 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433A_HORVU2.163e-10282.0514-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1[more]
14331_MAIZE8.221e-10280.8514-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=... [more]
14332_MAIZE1.402e-10180.8514-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE... [more]
1433B_HORVU9.090e-10178.1014-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1[more]
14334_ORYSJ4.511e-10077.3714-3-3-like protein GF14-D OS=Oryza sativa subsp. ... [more]
1433_SPIOL1.313e-9993.3314-3-3-like protein (Fragment) OS=Spinacia olerace... [more]
14338_ARATH1.313e-9976.2514-3-3-like protein GF14 kappa OS=Arabidopsis thal... [more]
14336_ARATH1.313e-9976.6914-3-3-like protein GF14 lambda OS=Arabidopsis tha... [more]
14331_ORYSJ1.111e-9875.9014-3-3-like protein GF14-A OS=Oryza sativa subsp. ... [more]
1433_CHLRE3.233e-9879.2414-3-3-like protein OS=Chlamydomonas reinhardtii P... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA28BE08RM1 IVIA1 Citrus clementina cDNA clone IC0AAA28BE08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC888657 ID=FC888657; Name=FC888657; organism=Citrus clementina; type=EST; length=841bp
CCCCCCTCTCTCCCCCAATTTCAAAACAAACTCTCTCTCCCTCAGATCTA
TTCATTCAAACGACAACCACATCAACCAAAAAAAAAAAAAAAAAAGACAA
ATGGCCGCCGCAGCCACACCCACGCCTTCGCCTCGCGAGGAGAACGTCTA
CATGGCGAAGCTCGCTGAGCAAGCCGAGCGCTACGAGGAAATGGTCGAGT
TCATGGAAAAAGTCTCCGCCTCCGTCGAGAGCAGCGAGGAACTCACCGTT
GAGGAACGCAACCTCCTCTCCGTCGCTTACAAGAACGTCATCGGCGCCCG
CCGTGCCAGCTGGCGCATTATTTCCTCCATCGAACAGAAAGAGGAGAGCC
GCGGCAACGAGGACCACGTCTCCACGATCCGAGATTACCGCTCCAAGATC
GAGACCGAGCTTTCCTCGATCTGCGACGGCATCTTGAAGCTTCTTGACTC
CCGCCTCATTCCTTGCGCTTCTTCTGGTGACTCCAAGGTTTTCTATTTGA
AGATGAAGGGAGATTATCACAGGTACTTGGCTGAGTTCAAGACCGGAGCC
GAGCGTAAGGAAGCCGCCGAGAGTACCCTCACTGCTTATAAAGCCGCTCA
GGATATTGCAAATGCAGAATTGGCTCCGACTCATCCCATCCGTTTAGGAC
TGGCTCTGAACTTCTCTGTGTTTTACTATGAGATCCTGAACTCTCCTGAT
CGTGCTTGCAATTTGGCCAAGCAGGCTTTTGACGAGGCAATTGCTGAGTT
GGATACCCTGGGTGAGGAGTCCTACAAGGATAGCACTTTGATCATGCAAC
TTCTTCGTGACAACCTCACTCTGTGGACCTCCGACATGCAG
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