FC896012
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC896012 vs. ExPASy Swiss-Prot
Match: ACSL6_HUMAN (Long-chain-fatty-acid--CoA ligase 6 OS=Homo sapiens GN=ACSL6 PE=2 SV=4) HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13 Identity = 55/175 (31.43%), Postives = 82/175 (46.86%), Query Frame = 2 Query: 242 NNQMLGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNP--GDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE-NKIPSILSCLPRC-CLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELP-PKKKTNISTIMY 751 N LG RK PY WL+YQEV D A GS + G++ N PEWII AC + ++ VPLYDTLG A+ +IIN A++S V + K +L + R LK I+ + K+ ++ GV S + G + + P P + ++S + + Sbjct: 105 NGPCLGFRKPKQ----PYQWLSYQEVADRAEFLGSGLLQHNCKACTDQFIGVFAQNRPEWIIVELACYTYSMVVVPLYDTLGPGAIRYIINTADISTVIVDKPQKAVLLLEHVERKETPGLKLIILMDPFEEALKERGQKCGVVIKSMQAVEDCGQENHQAPVPPQPDDLSIVCF 275
BLAST of FC896012 vs. ExPASy Swiss-Prot
Match: ACSL6_MOUSE (Long-chain-fatty-acid--CoA ligase 6 OS=Mus musculus GN=Acsl6 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.737e-12 Identity = 52/175 (29.71%), Postives = 82/175 (46.86%), Query Frame = 2 Query: 242 NNQMLGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDR--CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE-NKIPSILSCLPRC-CLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELP-PKKKTNISTIMY 751 N LG RK PY WL+YQEV A GS + G G++ N PEWIIA AC + ++ VPLYDTLG ++ +IIN A++ V + +K +L + R LK ++ + ++ ++ GV S + G + P P + ++S + + Sbjct: 105 NGPCLGFRKPEQ----PYQWLSYQEVAKRAEFLGSGLLQHDCKVGTEQFVGVFAQNRPEWIIAELACYTYSMVVVPLYDTLGPGSISYIINTADICTVIVDKPHKATLLLEHVERKETPGLKLVILMEPFEDALRERGKKCGVDIKSMQAIEDCGRENHHAPVPPRPDDLSIVCF 275
BLAST of FC896012 vs. ExPASy Swiss-Prot
Match: ACSL6_RAT (Long-chain-fatty-acid--CoA ligase 6 OS=Rattus norvegicus GN=Acsl6 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.269e-12 Identity = 52/175 (29.71%), Postives = 83/175 (47.43%), Query Frame = 2 Query: 242 NNQMLGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDR--CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE-NKIPSILSCLPRC-CLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELP-PKKKTNISTIMY 751 N LG RK PY WL+YQEV A GS + G G++ N PEWIIA AC + ++ VPLYDTLG ++ +IIN A++ V + +K +L + R LK ++ + ++ ++ GV S + G + +P P + ++S + + Sbjct: 105 NGPCLGFRKPEQ----PYQWLSYQEVAKRAEFLGSGLLQHDCKVGTEQFIGVFAQNRPEWIIAELACYTYSMVVVPLYDTLGPGSIRYIINTADICTVIVDKPHKAILLLEHVERKETPGLKLVILMEPFDDALRERGKKCGVDIKSMQAIEDSGQENHRVPVPPRPDDLSIVCF 275
BLAST of FC896012 vs. ExPASy Swiss-Prot
Match: ACSL3_PONAB (Long-chain-fatty-acid--CoA ligase 3 OS=Pongo abelii GN=ACSL3 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.471e-11 Identity = 51/178 (28.65%), Postives = 84/178 (47.19%), Query Frame = 2 Query: 101 EARPAADGKPSAGPVYRCIYAKDGLLESPV-GLESPWQFFCDSAKRIPNNQMLGRRKV--------SDGKV------GPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ----ENKIPSILSCLPR 577 +A+P + KP + YR + + DGL G ++ + F + + N ++LG R+V +GK+ G Y WL+Y++V+ A FG+ ++ G P I+ EW+IA +AC V LY TLG A+ +N EV+ + K+ I+S +PR Sbjct: 56 KAKPV-NSKPDSA--YRSVNSLDGLASVLYPGCDTLDKVFTYAKNKFKNKRLLGTREVLNEEDEVQPNGKIFKKVILGQYNWLSYEDVFVRAFNFGNGLQMLGQKPKTNIAIFCETRAEWMIAAQACFMYNFQLVTLYATLGGPAIVHALNETEVTNIITSKELLQTKLKDIVSLVPR 230
BLAST of FC896012 vs. ExPASy Swiss-Prot
Match: ACSL3_HUMAN (Long-chain-fatty-acid--CoA ligase 3 OS=Homo sapiens GN=ACSL3 PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.471e-11 Identity = 51/178 (28.65%), Postives = 84/178 (47.19%), Query Frame = 2 Query: 101 EARPAADGKPSAGPVYRCIYAKDGLLESPV-GLESPWQFFCDSAKRIPNNQMLGRRKV--------SDGKV------GPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ----ENKIPSILSCLPR 577 +A+P + KP + YR + + DGL G ++ + F + + N ++LG R+V +GK+ G Y WL+Y++V+ A FG+ ++ G P I+ EW+IA +AC V LY TLG A+ +N EV+ + K+ I+S +PR Sbjct: 56 KAKPV-NSKPDSA--YRSVNSLDGLASVLYPGCDTLDKVFTYAKNKFKNKRLLGTREVLNEEDEVQPNGKIFKKVILGQYNWLSYEDVFVRAFNFGNGLQMLGQKPKTNIAIFCETRAEWMIAAQACFMYNFQLVTLYATLGGPAIVHALNETEVTNIITSKELLQTKLKDIVSLVPR 230
BLAST of FC896012 vs. ExPASy Swiss-Prot
Match: ACSL3_MOUSE (Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus GN=Acsl3 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11 Identity = 51/178 (28.65%), Postives = 84/178 (47.19%), Query Frame = 2 Query: 101 EARPAADGKPSAGPVYRCIYAKDGLLESPV-GLESPWQFFCDSAKRIPNNQMLGRRKV--------SDGKV------GPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ----ENKIPSILSCLPR 577 +A+P + SA YR I + DGL G ++ + F + + N ++LG R++ +GK+ G Y WL+Y++V+ A+ FG+ ++ G P I+ EW+IA +AC V LY TLG A+ +N EV+ + K+ I+S +PR Sbjct: 56 KAKPVSSKPDSA---YRSINSVDGLASVLYPGCDTLDKVFMYAKNKFKNKRLLGTREILNEEDEIQPNGKIFKKVILGHYNWLSYEDVFIRALDFGNGLQMLGQKPKANIAIFCETRAEWMIAAQACFMYNFQLVTLYATLGGPAIVHGLNETEVTNIITSKELLQTKLKEIVSLVPR 230
BLAST of FC896012 vs. ExPASy Swiss-Prot
Match: ACSL3_RAT (Long-chain-fatty-acid--CoA ligase 3 OS=Rattus norvegicus GN=Acsl3 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11 Identity = 50/178 (28.09%), Postives = 84/178 (47.19%), Query Frame = 2 Query: 101 EARPAADGKPSAGPVYRCIYAKDGLLESPV-GLESPWQFFCDSAKRIPNNQMLGRRKV--------SDGKV------GPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ----ENKIPSILSCLPR 577 +A+P + SA YR + + DGL G ++ + F + + + ++LG R++ +GKV G Y WL+Y++V+ A+ FG+ ++ G P I+ EW+IA +AC V LY TLG A+ +N EV+ + K+ I+S +PR Sbjct: 56 KAKPVSSKPDSA---YRSVNSMDGLASVLYPGCDTLDKVFMYAKNKFKDKRLLGTREILNEEDEIQPNGKVFKKVILGHYNWLSYEDVFIRALDFGNGLQMLGQKPKANIAIFCETRAEWMIAAQACFMYNFQLVTLYATLGGPAIVHGLNETEVTNIITSKELLQTKLKDIVSLVPR 230 The following BLAST results are available for this feature:
BLAST of FC896012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC896012 ID=FC896012; Name=FC896012; organism=Citrus clementina; type=EST; length=751bpback to top |