FC899093
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC899093 vs. ExPASy Swiss-Prot
Match: DHSA_CHICK (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Gallus gallus GN=SDHA PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 2.277e-15 Identity = 42/100 (42.00%), Postives = 53/100 (53.00%), Query Frame = 1 Query: 52 QLQVRNFSRTAPANKIITPNGPLRAKEASPLLNNKYPIIDHEYDXXXXXXXXXXXXXXXXXXXXXXNTACISKLFPTRSHTVAAQGGINAALGNMHKDDW 351 Q RNF T K + + S ++ +YP++DHE+D NTAC++KLFPTRSHTVAAQGGINAALGNM D+W Sbjct: 28 QTHARNFHFTVDGKKNAST-------KVSDSISTQYPVVDHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNW 120
BLAST of FC899093 vs. ExPASy Swiss-Prot
Match: DHSAB_XENLA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit B, mitochondrial OS=Xenopus laevis GN=sdha-B PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.973e-15 Identity = 37/74 (50.00%), Postives = 46/74 (62.16%), Query Frame = 1 Query: 130 EASPLLNNKYPIIDHEYDXXXXXXXXXXXXXXXXXXXXXXNTACISKLFPTRSHTVAAQGGINAALGNMHKDDW 351 + S ++ +YP++DH++D NTACI+KLFPTRSHTVAAQGGINAALGNM DDW Sbjct: 49 KVSDSISTQYPVVDHDFDAVVVGAGGAGLRAAFGLSEAGFNTACITKLFPTRSHTVAAQGGINAALGNMEDDDW 122
BLAST of FC899093 vs. ExPASy Swiss-Prot
Match: DHSA_XENTR (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Xenopus tropicalis GN=sdha PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.883e-15 Identity = 37/72 (51.39%), Postives = 45/72 (62.50%), Query Frame = 1 Query: 136 SPLLNNKYPIIDHEYDXXXXXXXXXXXXXXXXXXXXXXNTACISKLFPTRSHTVAAQGGINAALGNMHKDDW 351 S ++ +YP++DH++D NTACI+KLFPTRSHTVAAQGGINAALGNM DDW Sbjct: 51 SDSISTQYPVVDHDFDAVVVGAGGAGLRAAFGLSEAGFNTACITKLFPTRSHTVAAQGGINAALGNMEDDDW 122
BLAST of FC899093 vs. ExPASy Swiss-Prot
Match: DHSA_MOUSE (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Mus musculus GN=Sdha PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.883e-15 Identity = 36/74 (48.65%), Postives = 47/74 (63.51%), Query Frame = 1 Query: 130 EASPLLNNKYPIIDHEYDXXXXXXXXXXXXXXXXXXXXXXNTACISKLFPTRSHTVAAQGGINAALGNMHKDDW 351 + S ++ +YP++DHE+D NTAC++KLFPTRSHTVAAQGGINAALGNM +D+W Sbjct: 46 KVSDAISTQYPVVDHEFDAVVVGAGGAGLRAAFGLSEAGFNTACLTKLFPTRSHTVAAQGGINAALGNMEEDNW 119
BLAST of FC899093 vs. ExPASy Swiss-Prot
Match: DHSA2_ARATH (Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial OS=Arabidopsis thaliana GN=SDH1-2 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.883e-15 Identity = 47/103 (45.63%), Postives = 55/103 (53.40%), Query Frame = 1 Query: 49 RQLQVRNFSRTAPANKIITPNGPLRAKEASPLLNNK--YPIIDHEYDXXXXXXXXXXXXXXXXXXXXXXNTACISKLFPTRSHTVAAQGGINAALGNMHKDDW 351 R L+V + SR + +N + R A P +K Y I+DH YD NTACI+KLFPTRSHTVAAQGGINAALGNM DDW Sbjct: 3 RCLRVASSSRRSESNGAFITSQLSRFFSAPPSAGDKSSYTIVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMSVDDW 105
BLAST of FC899093 vs. ExPASy Swiss-Prot
Match: DHSA_ORYSJ (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.293e-14 Identity = 36/68 (52.94%), Postives = 42/68 (61.76%), Query Frame = 1 Query: 148 NNKYPIIDHEYDXXXXXXXXXXXXXXXXXXXXXXNTACISKLFPTRSHTVAAQGGINAALGNMHKDDW 351 ++ Y ++DH YD NTACI+KLFPTRSHTVAAQGGINAALGNM +DDW Sbjct: 36 SSSYTVVDHSYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDW 103
BLAST of FC899093 vs. ExPASy Swiss-Prot
Match: DHSA1_ARATH (Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial OS=Arabidopsis thaliana GN=SDH1-1 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.293e-14 Identity = 37/67 (55.22%), Postives = 41/67 (61.19%), Query Frame = 1 Query: 151 NKYPIIDHEYDXXXXXXXXXXXXXXXXXXXXXXNTACISKLFPTRSHTVAAQGGINAALGNMHKDDW 351 + Y I+DH YD NTACI+KLFPTRSHTVAAQGGINAALGNM +DDW Sbjct: 41 SSYTIVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMSEDDW 107
BLAST of FC899093 vs. ExPASy Swiss-Prot
Match: DHSA_DROME (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Drosophila melanogaster GN=Scs-fp PE=2 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 5.607e-14 Identity = 38/82 (46.34%), Postives = 49/82 (59.76%), Query Frame = 1 Query: 109 NGPLRAKEASP-LLNNKYPIIDHEYDXXXXXXXXXXXXXXXXXXXXXXNTACISKLFPTRSHTVAAQGGINAALGNMHKDDW 351 +G +A A+P ++ +YP++DH YD TA I+KLFPTRSHT+AAQGGINAALGNM +DDW Sbjct: 35 HGRQQASAANPDKISKQYPVVDHAYDAIVVGAGGAGLRAAFGLVAEGFRTAVITKLFPTRSHTIAAQGGINAALGNMEEDDW 116
BLAST of FC899093 vs. ExPASy Swiss-Prot
Match: DHSA_RICBR (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia bellii (strain RML369-C) GN=sdhA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.381e-12 Identity = 36/69 (52.17%), Postives = 40/69 (57.97%), Query Frame = 1 Query: 145 LNNKYPIIDHEYDXXXXXXXXXXXXXXXXXXXXXXNTACISKLFPTRSHTVAAQGGINAALGNMHKDDW 351 + Y II H++D NTACISKLFPTRSHTVAAQGGI+AALGNM DDW Sbjct: 1 MTKSYNIIHHKFDVIVVGAGGAGLRAAFGMAEEGLNTACISKLFPTRSHTVAAQGGISAALGNMGADDW 69
BLAST of FC899093 vs. ExPASy Swiss-Prot
Match: DHSA_DICDI (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Dictyostelium discoideum GN=sdhA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.804e-12 Identity = 34/65 (52.31%), Postives = 38/65 (58.46%), Query Frame = 1 Query: 157 YPIIDHEYDXXXXXXXXXXXXXXXXXXXXXXNTACISKLFPTRSHTVAAQGGINAALGNMHKDDW 351 Y ++DH YD TACI+KLFPTRSHTVAAQGGINAALGN +DDW Sbjct: 33 YAVVDHTYDAIVVGAGGAGLRAALGLTEKGYKTACITKLFPTRSHTVAAQGGINAALGNADQDDW 97 The following BLAST results are available for this feature:
BLAST of FC899093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >FC899093 ID=FC899093; Name=FC899093; organism=Citrus clementina; type=EST; length=353bpback to top |