FC899095

Overview
NameFC899095
Unique NameFC899095
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length917
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: STP10_ARATH (Sugar transport protein 10 OS=Arabidopsis thaliana GN=STP10 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.097e-12
Identity = 40/119 (33.61%), Postives = 64/119 (53.78%), Query Frame = 2
Query:  560 YLACLFFSCWISDPLNNWLGRRGTIFFCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGDNAWRYQLGSA 916
            YLA L  S +++  +    GR+ ++F  G+   +  + +AFA     L + RLLLGVG+G    +TP+Y +E  PA IRG + + +Q+    GI +    N G + +  + WR  LG A
Sbjct:   92 YLAALVAS-FMASVITRKHGRKVSMFIGGLAFLIGALFNAFAVNVSMLIIGRLLLGVGVGFANQSTPVYLSEMAPAKIRGALNIGFQMAITIGILVANLINYGTSKMAQHGWRVSLGLA 209          
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: HXT7_YEAST (High-affinity hexose transporter HXT6 OS=Saccharomyces cerevisiae GN=HXT7 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.097e-12
Identity = 58/189 (30.69%), Postives = 88/189 (46.56%), Query Frame = 2
Query:  374 QPFSLYFTVAV-CSMSAC---VQGWDQTGSNGA--NLGFPEALGIS--TSTSNPSHIRNEWIVGVVNAAPYLACLFFSCWISDPLNNWLGRR-GTIFFCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGDNA-WRYQLG 910
            +P S Y TV++ C M A    V GWD    +G      F    G+     T+  S +R   IV + N    +  +  S      L +  GR+ G I    I+    +I  A    W Q F+ R++ G+G+G  A  +P+  +E  P ++RG +V  +QL    GIFLG+C N G  +  ++  WR  LG
Sbjct:   57 RPASAYVTVSIMCIMIAFGGFVFGWDTGTISGFINQTDFIRRFGMKHKDGTNYLSKVRTGLIVSIFNIGCAIGGIILS-----KLGDMYGRKVGLIVVVVIYIIGIIIQIASINKWYQYFIGRIISGLGVGGIAVLSPMLISEVSPKHLRGTLVSCYQLMITAGIFLGYCTNFGTKNYSNSVQWRVPLG 240          
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: HXT6_YEAST (High-affinity hexose transporter HXT6 OS=Saccharomyces cerevisiae GN=HXT6 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 9.097e-12
Identity = 58/189 (30.69%), Postives = 88/189 (46.56%), Query Frame = 2
Query:  374 QPFSLYFTVAV-CSMSAC---VQGWDQTGSNGA--NLGFPEALGIS--TSTSNPSHIRNEWIVGVVNAAPYLACLFFSCWISDPLNNWLGRR-GTIFFCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGDNA-WRYQLG 910
            +P S Y TV++ C M A    V GWD    +G      F    G+     T+  S +R   IV + N    +  +  S      L +  GR+ G I    I+    +I  A    W Q F+ R++ G+G+G  A  +P+  +E  P ++RG +V  +QL    GIFLG+C N G  +  ++  WR  LG
Sbjct:   57 RPASAYVTVSIMCIMIAFGGFVFGWDTGTISGFINQTDFIRRFGMKHKDGTNYLSKVRTGLIVSIFNIGCAIGGIILS-----KLGDMYGRKVGLIVVVVIYIIGIIIQIASINKWYQYFIGRIISGLGVGGIAVLSPMLISEVSPKHLRGTLVSCYQLMITAGIFLGYCTNFGTKNYSNSVQWRVPLG 240          
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: GHT6_SCHPO (High-affinity fructose transporter ght6 OS=Schizosaccharomyces pombe GN=ght6 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.188e-11
Identity = 40/126 (31.75%), Postives = 67/126 (53.17%), Query Frame = 2
Query:  494 TSTSNPSHIRNEWIVGVVNAAPYLACLFFSCWISDPLNNWLGRRGTIF-FCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMG 868
            T T + S  R   +VG+VN    + CL     +S PL +  G+R  I  +  ++ T  ++      +W Q+ V ++  G+G+G  +   P Y +E+ P +IRG +V ++QL+   GIF+  C NMG
Sbjct:   48 TDTYSYSSARQGLLVGMVNTGTTVGCL-----LSSPLGDRFGKRKCIMGWTLVYITGVIVQLTTIPSWVQMMVAKIWTGLGIGALSVIAPGYQSESSPPHIRGAIVTTYQLFITLGIFIAACINMG 168          
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: ARAE_ECOLI (Arabinose-proton symporter OS=Escherichia coli (strain K12) GN=araE PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.188e-11
Identity = 43/128 (33.59%), Postives = 66/128 (51.56%), Query Frame = 2
Query:  527 EWIVGVVNAAPYLACLFFSCWISDPLNNWLGRRGTIFFCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGDNAWRYQLG 910
            EW+V  +     +  LF + W+S  L    GR+ ++    I   L  IGSAFA + E L   R++LG+ +G  + T P+Y +E    N+RG M+  +QL    GI L F ++   +  G+  WR  LG
Sbjct:   62 EWVVSSMMLGAAIGALF-NGWLSFRL----GRKYSLMAGAILFVLGSIGSAFATSVEMLIAARVVLGIAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLGIVLAFLSDTAFSYSGN--WRAMLG 182          
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: ARAE_ECO57 (Arabinose-proton symporter OS=Escherichia coli O157:H7 GN=araE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.188e-11
Identity = 43/128 (33.59%), Postives = 66/128 (51.56%), Query Frame = 2
Query:  527 EWIVGVVNAAPYLACLFFSCWISDPLNNWLGRRGTIFFCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGDNAWRYQLG 910
            EW+V  +     +  LF + W+S  L    GR+ ++    I   L  IGSAFA + E L   R++LG+ +G  + T P+Y +E    N+RG M+  +QL    GI L F ++   +  G+  WR  LG
Sbjct:   62 EWVVSSMMLGAAIGALF-NGWLSFRL----GRKYSLMAGAILFVLGSIGSAFATSVEMLIAARVVLGIAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLGIVLAFLSDTAFSYSGN--WRAMLG 182          
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: HXT3_YEAST (Low-affinity glucose transporter HXT3 OS=Saccharomyces cerevisiae GN=HXT3 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.552e-11
Identity = 53/184 (28.80%), Postives = 83/184 (45.11%), Query Frame = 2
Query:  389 YFTVAVCSMSAC----VQGWDQTGSNG--ANLGFPEALGISTSTSNP--SHIRNEWIVGVVNAAPYLACLFFSCWISDPLNNWLGRR-GTIFFCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGDNA-WRYQLG 910
            Y TV++C +       V GWD    +G  A   F    G+     +   S +R   IV + N    +  +  +      L +  GR+ G I    I+    +I  A    W Q F+ R++ G+G+G  A  +P+  +E  P  +RG +V  +QL    GIFLG+C N G  +  ++  WR  LG
Sbjct:   59 YVTVSICCVMVAFGGFVFGWDTGTISGFVAQTDFLRRFGMKHKDGSYYLSKVRTGLIVSIFNIGCAIGGIILA-----KLGDMYGRKMGLIVVVVIYIIGIIIQIASINKWYQYFIGRIISGLGVGGIAVLSPMLISEVAPKEMRGTLVSCYQLMITLGIFLGYCTNFGTKNYSNSVQWRVPLG 237          
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: GHT7_SCHPO (Probable high-affinity hexose transporter ght7 OS=Schizosaccharomyces pombe GN=ght7 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11
Identity = 44/148 (29.73%), Postives = 72/148 (48.65%), Query Frame = 2
Query:  494 TSTSNPSHIRNEWIVGVVNAAPYLACLFFSCWISDPLNNWLGRR------GTIFFCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGDNA---WRYQLG 910
            T++ + S  R   I G+VN        FF C +S P+ + +G+R       T++  GI   ++ + S     W Q+ V ++  G+ +G  +  TP Y +E  PA +RG +V ++QL+   GIF+  C NMG           WR  +G
Sbjct:   16 TNSYSYSSSRQGLITGMVNVGS-----FFGCLLSSPVADKIGKRLSIIVWTTVYLIGIIIQVTTVPS-----WVQILVAKIWTGLSIGALSVITPGYQSEVAPAIMRGAIVTTYQLFITLGIFIAACINMGTHKYSHGTTAQWRISIG 153          
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: GAL2_YEAST (Galactose transporter OS=Saccharomyces cerevisiae GN=GAL2 PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11
Identity = 51/188 (27.13%), Postives = 84/188 (44.68%), Query Frame = 2
Query:  374 QPFSLYFTVAVCSMSAC----VQGWDQTGSNG--ANLGFPEALGIS--TSTSNPSHIRNEWIVGVVNAAPYLACLFFSCWISDPLNNWLGRRGTIFFCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGDNA-WRYQLG 910
            +P S Y TV++  +       + GWD    +G      F    G+     T   S++R   IV + N    + C F    +S   + +  ++G      ++    +I  A    W Q F+ R++ G+G+G  A   P+  +E  P ++RG +V  +QL    GIFLG+C N G     ++  WR  LG
Sbjct:   63 KPMSEYVTVSLLCLCVAFGGFMFGWDTGTISGFVVQTDFLRRFGMKHKDGTHYLSNVRTGLIVAIFN----IGCAFGGIILSKGGDMYGRKKGLSIVVSVYIVGIIIQIASINKWYQYFIGRIISGLGVGGIAVLCPMLISEIAPKHLRGTLVSCYQLMITAGIFLGYCTNYGTKSYSNSVQWRVPLG 246          
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: ARAE_KLEOX (Arabinose-proton symporter OS=Klebsiella oxytoca GN=araE PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11
Identity = 41/128 (32.03%), Postives = 66/128 (51.56%), Query Frame = 2
Query:  527 EWIVGVVNAAPYLACLFFSCWISDPLNNWLGRRGTIFFCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGDNAWRYQLG 910
            EW+V  +     +  LF + W+S  L    GR+ ++    +      +GSAFA + E L V R++LGV +G  + T P+Y +E    N+RG M+  +QL    GI + F ++   +  G+  WR  LG
Sbjct:   62 EWVVSSMMLGAAIGALF-NGWLSFRL----GRKYSLMVGAVLFVAGSVGSAFATSVEMLLVARIVLGVAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLGIVMAFLSDTAFSYSGN--WRAMLG 182          
The following BLAST results are available for this feature:
BLAST of FC899095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
STP10_ARATH9.097e-1233.61Sugar transport protein 10 OS=Arabidopsis thaliana... [more]
HXT7_YEAST9.097e-1230.69High-affinity hexose transporter HXT6 OS=Saccharom... [more]
HXT6_YEAST9.097e-1230.69High-affinity hexose transporter HXT6 OS=Saccharom... [more]
GHT6_SCHPO1.188e-1131.75High-affinity fructose transporter ght6 OS=Schizos... [more]
ARAE_ECOLI1.188e-1133.59Arabinose-proton symporter OS=Escherichia coli (st... [more]
ARAE_ECO571.188e-1133.59Arabinose-proton symporter OS=Escherichia coli O15... [more]
HXT3_YEAST1.552e-1128.80Low-affinity glucose transporter HXT3 OS=Saccharom... [more]
GHT7_SCHPO2.027e-1129.73Probable high-affinity hexose transporter ght7 OS=... [more]
GAL2_YEAST2.027e-1127.13Galactose transporter OS=Saccharomyces cerevisiae ... [more]
ARAE_KLEOX2.027e-1132.03Arabinose-proton symporter OS=Klebsiella oxytoca G... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA77BF06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA77BF06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC899095 ID=FC899095; Name=FC899095; organism=Citrus clementina; type=EST; length=917bp
CTTTTCTGCACCTCCTCAAGCACACCCACGAACTCGATCACTCGCCATGT
CGACTAGCATCGAGAAGCCCTCCGTCGCAAAGCGACACCAGAACTACGGG
AGTGATGAACACCTAGAAATCGCCGATGAACGAGGAGAGGACTTCGCCCA
GAACACCAACGCTCGACTCCAGAACCCTCTGCACGGTCTCTCGCGAGAGA
GCCTCAGCAAGAAGGTCGCACTGTTCACATCCCAGCACGGCATGGAGGAG
GAGCGAGACCTCTTTGAGAAGGCGGCGATCCTTGCTCAGCATCCCGAGCA
GTTTGAGGAACACCGAGAACTGGACGAGGACGACCGGTACCACCTTCGAC
GGGAGACGACCAACAAGTGGTCTCAGCCGTTCTCTCTCTACTTCACCGTC
GCCGTTTGCTCAATGAGTGCTTGCGTCCAGGGTTGGGATCAGACTGGATC
GAACGGCGCCAACCTCGGTTTCCCTGAGGCCCTCGGCATCTCCACTTCCA
CCTCGAACCCCAGCCACATCCGTAACGAATGGATCGTAGGAGTCGTCAAC
GCCGCTCCCTATCTCGCCTGCTTGTTCTTCTCGTGCTGGATCTCCGATCC
TCTCAACAACTGGCTCGGTCGACGAGGAACCATCTTCTTCTGCGGAATCT
TCTGCACCCTCTCGGTCATCGGTAGCGCCTTCGCCCAGACCTGGGAGCAG
CTTTTCGTCACTCGTCTCCTCCTCGGTGTTGGCATGGGCCCCAAGGCCTC
CACCACCCCCATCTACGCCGCCGAGAACGTTCCCGCCAACATCCGAGGAG
GCATGGTCATGAGCTGGCAGCTGTGGACTGCGTTCGGTATTTTTCTCGGG
TTCTGCGCCAACATGGGCATGGCGGACGTCGGTGACAACGCCTGGCGATA
CCAGCTCGGCTCTGCTT
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