FC899095

Overview
NameFC899095
Unique NameFC899095
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length917
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: GHT8_SCHPO (Probable high-affinity hexose transporter ght8, mitochondrial OS=Schizosaccharomyces pombe GN=ght8 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11
Identity = 44/141 (31.21%), Postives = 70/141 (49.65%), Query Frame = 2
Query:  494 TSTSNPSHIRNEWIVGVVNAAPYLACLFFSCWISDPLNNWLGRRGTIFFCGIFCTLSVIGSAFA-QTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGDNA-WRYQLG 910
            T T + S  R   I G+VN      C+     +S PL + +G+R +I F  I   + +I    A  +W Q+ V ++  G+ +G  +   P + +E  PA +RG +V ++QL    GIF+  C NMG   +   A WR  +G
Sbjct:   48 TDTYSYSSARQGLITGMVNVGSMTGCI-----LSSPLMDRIGKRVSIMFWTIVYLIGIILQVTAVPSWVQIMVAKIWTGLAIGALSVLAPGFQSEVAPATLRGTIVTTYQLAVTGGIFIAACINMGTHKLHKTAQWRVSMG 183          
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: HXT1_YEAST (Low-affinity glucose transporter HXT1 OS=Saccharomyces cerevisiae GN=HXT1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.457e-11
Identity = 51/185 (27.57%), Postives = 84/185 (45.41%), Query Frame = 2
Query:  386 LYFTVAVCSMSAC----VQGWDQTGSNG--ANLGFPEALGISTSTSNP--SHIRNEWIVGVVNAAPYLACLFFSCWISDPLNNWLGRR-GTIFFCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGDNA-WRYQLG 910
            +Y TV++C +       + GWD    +G  A   F    G+     +   S +R   IV + N    +  +  +      L +  GRR G I    I+    +I  A    W Q F+ R++ G+G+G     +P+  +E  P+ +RG +V  +Q+    GIFLG+C N G  +  ++  WR  LG
Sbjct:   61 VYVTVSICCVMVAFGGFIFGWDTGTISGFVAQTDFLRRFGMKHHDGSHYLSKVRTGLIVSIFNIGCAIGGIVLA-----KLGDMYGRRIGLIVVVVIYTIGIIIQIASINKWYQYFIGRIISGLGVGGITVLSPMLISEVAPSEMRGTLVSCYQVMITLGIFLGYCTNFGTKNYSNSVQWRVPLG 240          
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: PLT1_ARATH (Putative polyol transporter 1 OS=Arabidopsis thaliana GN=PLT1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.701e-11
Identity = 44/170 (25.88%), Postives = 83/170 (48.82%), Query Frame = 2
Query:  404 VCSMSACVQGWDQTGSNGANLGFPEALGISTSTSNPSHIRNEWIVGVVNAAPYLACLFFSCWISDPLNNWLGRRGTIFFCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGDN-AWRYQLG 910
            + SM++ + G+D    +GA++   + L +S        ++ E ++G++N    +         +   ++WLGRR TI   G F     +   FA  +  + V R + G+G+G      P+Y AE  PA+ RG +    +++   GI LG+ +N   + + ++  WR+ LG
Sbjct:   32 LASMTSIILGYDIGVMSGASIFIKDDLKLSD-------VQLEILMGILNIYSLVGS-----GAAGRTSDWLGRRYTIVLAGAFFFCGALLMGFATNYPFIMVGRFVAGIGVGYAMMIAPVYTAEVAPASSRGFLTSFPEIFINIGILLGYVSNYFFSKLPEHLGWRFMLG 189          
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: HXT9_YEAST (Hexose transporter HXT9 OS=Saccharomyces cerevisiae GN=HXT9 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.701e-11
Identity = 61/189 (32.28%), Postives = 85/189 (44.97%), Query Frame = 2
Query:  374 QPFSLYFTVAV-CSMSAC---VQGWDQ-TGSNGANLG-FPEALGISTS--TSNPSHIRNEWIVGVVNAAPYLACLFFSCWISDPLNNWLGRR-GTIFFCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGD-NAWRYQLG 910
            +P S Y TVA+ C M A    + GWD  T S   NL  F    G      T   S +R   IV + N    +  +  S      + +  GRR G I    I+    +I       W Q F+ R++ G+G+G  A  +P+  +E  P  IRG +V  +QL    GIFLG+C N G  +  +   WR  LG
Sbjct:   53 KPLSAYTTVAILCLMIAFGGFIFGWDTGTISGFVNLSDFIRRFGQKNDKGTYYLSKVRMGLIVSIFNIGCAIGGIVLS-----KVGDIYGRRIGLITVTAIYVVGILIQITSINKWYQYFIGRIISGLGVGGIAVLSPMLISEVAPKQIRGTLVQLYQLMCTMGIFLGYCTNYGTKNYHNATQWRVGLG 236          
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: HXT17_YEAST (Hexose transporter HXT17 OS=Saccharomyces cerevisiae GN=HXT17 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.701e-11
Identity = 49/181 (27.07%), Postives = 78/181 (43.09%), Query Frame = 2
Query:  386 LYFTVAVCSMSACVQGWDQTGSNGANLGFPEALGISTSTSNPSHIRNEWIVGVVNAAPYLACLFFSCWISD----PLNNWLGRR-GTIFFCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGDNA-WRYQLG 910
            +Y      S    + GWD    +G   GF        +  +  H   E+ +  V     +A     C I       L + LGRR   +    ++   ++I  +    W Q FV +++ G+G G  +   P+  +E  P ++RGG+V  +QL   FGIFLG+C+  G     + A WR  LG
Sbjct:   57 IYLLCYPISFGGFLPGWD----SGITAGFINMDNFKMNFGSYKHSTGEYYLSNVRMGLLVAMFSIGCAIGGLIFARLADTLGRRLAIVIVVLVYMVGAIIQISSNHKWYQYFVGKIIYGLGAGGCSVLCPMLLSEIAPTDLRGGLVSLYQLNMTFGIFLGYCSVYGTRKYDNTAQWRVPLG 233          
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: HXT13_YEAST (Hexose transporter HXT13 OS=Saccharomyces cerevisiae GN=HXT13 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.701e-11
Identity = 49/181 (27.07%), Postives = 78/181 (43.09%), Query Frame = 2
Query:  386 LYFTVAVCSMSACVQGWDQTGSNGANLGFPEALGISTSTSNPSHIRNEWIVGVVNAAPYLACLFFSCWISD----PLNNWLGRR-GTIFFCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGDNA-WRYQLG 910
            +Y      S    + GWD    +G   GF        +  +  H   E+ +  V     +A     C I       L + LGRR   +    ++   ++I  +    W Q FV +++ G+G G  +   P+  +E  P ++RGG+V  +QL   FGIFLG+C+  G     + A WR  LG
Sbjct:   57 IYLLCYPISFGGFLPGWD----SGITAGFINMDNFKMNFGSYKHSTGEYYLSNVRMGLLVAMFSIGCAIGGLIFARLADTLGRRLAIVIVVLVYMVGAIIQISSNHKWYQYFVGKIIYGLGAGGCSVLCPMLLSEIAPTDLRGGLVSLYQLNMTFGIFLGYCSVYGTRKYDNTAQWRVPLG 233          
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: HXT11_YEAST (Hexose transporter HXT11 OS=Saccharomyces cerevisiae GN=HXT11 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.701e-11
Identity = 61/189 (32.28%), Postives = 86/189 (45.50%), Query Frame = 2
Query:  374 QPFSLYFTVAV-CSMSAC---VQGWDQ-TGSNGANLG-FPEALGISTS--TSNPSHIRNEWIVGVVNAAPYLACLFFSCWISDPLNNWLGRR-GTIFFCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGD-NAWRYQLG 910
            +P S Y TVA+ C M A    + GWD  T S   NL  F    G      T   S +R   IV + N    +  +  S      + +  GRR G I    I+    +I       W Q F+ R++ G+G+G  A  +P+  +E  P +IRG +V  +QL    GIFLG+C N G  +  +   WR  LG
Sbjct:   53 KPLSAYTTVAILCLMIAFGGFIFGWDTGTISGFVNLSDFIRRFGQKNDKGTYYLSKVRMGLIVSIFNIGCAIGGIVLS-----KVGDIYGRRIGLITVTAIYVVGILIQITSINKWYQYFIGRIISGLGVGGIAVLSPMLISEVAPKHIRGTLVQLYQLMGTMGIFLGYCTNYGTKNYHNATQWRVGLG 236          
The following BLAST results are available for this feature:
BLAST of FC899095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
GHT8_SCHPO2.647e-1131.21Probable high-affinity hexose transporter ght8, mi... [more]
HXT1_YEAST3.457e-1127.57Low-affinity glucose transporter HXT1 OS=Saccharom... [more]
PLT1_ARATH7.701e-1125.88Putative polyol transporter 1 OS=Arabidopsis thali... [more]
HXT9_YEAST7.701e-1132.28Hexose transporter HXT9 OS=Saccharomyces cerevisia... [more]
HXT17_YEAST7.701e-1127.07Hexose transporter HXT17 OS=Saccharomyces cerevisi... [more]
HXT13_YEAST7.701e-1127.07Hexose transporter HXT13 OS=Saccharomyces cerevisi... [more]
HXT11_YEAST7.701e-1132.28Hexose transporter HXT11 OS=Saccharomyces cerevisi... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA77BF06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA77BF06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC899095 ID=FC899095; Name=FC899095; organism=Citrus clementina; type=EST; length=917bp
CTTTTCTGCACCTCCTCAAGCACACCCACGAACTCGATCACTCGCCATGT
CGACTAGCATCGAGAAGCCCTCCGTCGCAAAGCGACACCAGAACTACGGG
AGTGATGAACACCTAGAAATCGCCGATGAACGAGGAGAGGACTTCGCCCA
GAACACCAACGCTCGACTCCAGAACCCTCTGCACGGTCTCTCGCGAGAGA
GCCTCAGCAAGAAGGTCGCACTGTTCACATCCCAGCACGGCATGGAGGAG
GAGCGAGACCTCTTTGAGAAGGCGGCGATCCTTGCTCAGCATCCCGAGCA
GTTTGAGGAACACCGAGAACTGGACGAGGACGACCGGTACCACCTTCGAC
GGGAGACGACCAACAAGTGGTCTCAGCCGTTCTCTCTCTACTTCACCGTC
GCCGTTTGCTCAATGAGTGCTTGCGTCCAGGGTTGGGATCAGACTGGATC
GAACGGCGCCAACCTCGGTTTCCCTGAGGCCCTCGGCATCTCCACTTCCA
CCTCGAACCCCAGCCACATCCGTAACGAATGGATCGTAGGAGTCGTCAAC
GCCGCTCCCTATCTCGCCTGCTTGTTCTTCTCGTGCTGGATCTCCGATCC
TCTCAACAACTGGCTCGGTCGACGAGGAACCATCTTCTTCTGCGGAATCT
TCTGCACCCTCTCGGTCATCGGTAGCGCCTTCGCCCAGACCTGGGAGCAG
CTTTTCGTCACTCGTCTCCTCCTCGGTGTTGGCATGGGCCCCAAGGCCTC
CACCACCCCCATCTACGCCGCCGAGAACGTTCCCGCCAACATCCGAGGAG
GCATGGTCATGAGCTGGCAGCTGTGGACTGCGTTCGGTATTTTTCTCGGG
TTCTGCGCCAACATGGGCATGGCGGACGTCGGTGACAACGCCTGGCGATA
CCAGCTCGGCTCTGCTT
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