FC899927

Overview
NameFC899927
Unique NameFC899927
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length807
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_BACP2 (Phosphoglycerate kinase OS=Bacillus pumilus (strain SAFR-032) GN=pgk PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.810e-54
Identity = 113/188 (60.11%), Postives = 141/188 (75.00%), Query Frame = 3
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            M KKSV ++   D+KGK VF R D NVP+ D + +TDDTRIRAA+PTI++L   GAKV+L+SHLGRPKG VT +  L P+  RL ELLG +V KAD+  G  V+K ++ L +G VL+LENVRFY  EEKNDPE +K  A LAD+YVNDAFG AHRAHAST G+  YL P+V+GFL+QKEL+ L  A+S
Sbjct:    1 MNKKSVKDI---DVKGKVVFCRVDFNVPMKDGK-VTDDTRIRAALPTIEYLTGQGAKVLLASHLGRPKGQVTEELRLTPVAKRLQELLGQEVKKADEAYGDNVKKQISDLKDGDVLVLENVRFYPGEEKNDPELSKAFADLADVYVNDAFGAAHRAHASTAGIAAYL-PAVSGFLMQKELEVLGKAIS 183          
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_PROA2 (Phosphoglycerate kinase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=pgk PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.020e-53
Identity = 106/188 (56.38%), Postives = 144/188 (76.60%), Query Frame = 3
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            M KK++ ++S    KGK++ +R D NVPLD N  IT+D RI  A+P+I+ +++ G ++IL SHLGRPKG VTP+ SLAP+  RLSELL   VV A++CIG E  +   +L +G V++LEN+RF+ EEEKNDPEFA++LAS+ ++YVNDAFGTAHRAHASTEG+  Y+  SVAGFL++KEL YL  A++
Sbjct:    1 MQKKTLSDIS---CKGKRILMRVDFNVPLDLNGTITNDKRIIEALPSIRQVLETGGRLILMSHLGRPKGKVTPELSLAPVARRLSELLDTDVVMANNCIGTEAMQQALALQDGEVMMLENLRFHPEEEKNDPEFARELASMGEIYVNDAFGTAHRAHASTEGICHYVPISVAGFLIEKELRYLGNALA 185          
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_BACCZ (Phosphoglycerate kinase OS=Bacillus cereus (strain ZK / E33L) GN=pgk PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.020e-53
Identity = 111/188 (59.04%), Postives = 145/188 (77.13%), Query Frame = 3
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG V  +  L P+  RL ELLG  V KAD+  GP V+++VA++ EG VL+LENVRFY  EEKND E AK+ A+LAD++VNDAFG AHRAHAST G+  YL P+V+G L++KEL+ L  A+S
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQVVEEMRLTPVAARLGELLGKDVKKADEAFGPAVQEMVAAMNEGDVLVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELEVLGKALS 183          
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_BACSU (Phosphoglycerate kinase OS=Bacillus subtilis GN=pgk PE=1 SV=3)

HSP 1 Score: 209.92 bits (533), Expect = 1.332e-53
Identity = 112/188 (59.57%), Postives = 140/188 (74.47%), Query Frame = 3
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            M KK++ ++   D+KGK VF R D NVP+ D + +TDDTRIRAA+PTIKHL   GAKV+L+SHLGRPKG V  +  L P+  RL ELLG +V KAD+  G  V+  ++ + +G VL+LENVRFY  EEKNDPE AK  A LAD+YVNDAFG AHRAHAST G+ ++L P+VAGFL++KELD L  AVS
Sbjct:    1 MNKKTLKDI---DVKGKVVFCRVDFNVPMKDGE-VTDDTRIRAALPTIKHLADQGAKVLLASHLGRPKGEVVEELRLTPVAARLGELLGKEVKKADEAYGDAVKAQISEMKDGDVLVLENVRFYPGEEKNDPELAKAFAELADVYVNDAFGAAHRAHASTAGIAEHL-PAVAGFLMEKELDVLGKAVS 183          
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_BACCQ (Phosphoglycerate kinase OS=Bacillus cereus (strain Q1) GN=pgk PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.332e-53
Identity = 111/188 (59.04%), Postives = 144/188 (76.60%), Query Frame = 3
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG V  +  L P+  RL ELLG  V KAD+  GP  +++VA++ EG VL+LENVRFY  EEKND E AK+ A+LAD++VNDAFG AHRAHAST G+  YL P+V+G L++KELD L  A+S
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQVVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELDVLGKALS 183          
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_BACC7 (Phosphoglycerate kinase OS=Bacillus cereus (strain AH187) GN=pgk PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.332e-53
Identity = 111/188 (59.04%), Postives = 144/188 (76.60%), Query Frame = 3
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG V  +  L P+  RL ELLG  V KAD+  GP  +++VA++ EG VL+LENVRFY  EEKND E AK+ A+LAD++VNDAFG AHRAHAST G+  YL P+V+G L++KELD L  A+S
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQVVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELDVLGKALS 183          
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_BACC4 (Phosphoglycerate kinase OS=Bacillus cereus (strain B4264) GN=pgk PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.332e-53
Identity = 111/188 (59.04%), Postives = 144/188 (76.60%), Query Frame = 3
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG V  +  L P+  RL ELLG  V KAD+  GP  +++VA++ EG VL+LENVRFY  EEKND E AK+ A+LAD++VNDAFG AHRAHAST G+  YL P+V+G L++KELD L  A+S
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQVVEEMRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELDVLGKALS 183          
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_PELLD (Phosphoglycerate kinase OS=Pelodictyon luteolum (strain DSM 273) GN=pgk PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.740e-53
Identity = 104/183 (56.83%), Postives = 141/183 (77.05%), Query Frame = 3
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYL 791
            M KK++ +++   ++GK+V +R D NVPLD N  ITDD RI  A+P+I+ ++ NG ++IL SHLGRPKG V P FSL P+  RLSEL+   V+ A DCIG EV +   +L +G VLLLEN+RF+ EEE NDPEF+++LASL ++YVNDAFGTAHRAHASTEG+T +++ +VAG+L++KEL YL
Sbjct:    1 MQKKTLSDIT---IQGKRVLMRVDFNVPLDGNGEITDDKRIVEALPSIRKVLDNGGRLILMSHLGRPKGKVNPDFSLTPVALRLSELIDTPVIMAGDCIGTEVMQQALALQDGEVLLLENLRFHPEEEANDPEFSRELASLGEIYVNDAFGTAHRAHASTEGITHFVQTAVAGYLIEKELMYL 180          
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_GEOSW (Phosphoglycerate kinase OS=Geobacillus sp. (strain WCH70) GN=pgk PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.740e-53
Identity = 113/188 (60.11%), Postives = 142/188 (75.53%), Query Frame = 3
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            M KK+V ++   D+KGK+VF R D NVP++ N  ITDDTRIRAA+PTI++L++ GAKVIL+SHLGRPKG V  +  L  +  RLSELLG  V K D+  G  V++ ++ + EG VLLLENVRFY  EEKNDPE AK  A LAD+YVNDAFG AHRAHASTEG+  YL P+VAGFL++KE++ L  A+S
Sbjct:    1 MNKKTVRDV---DVKGKRVFCRVDFNVPME-NGAITDDTRIRAALPTIRYLMEQGAKVILASHLGRPKGKVVEELRLNAVARRLSELLGKHVTKTDEAYGDAVKEAISKMNEGDVLLLENVRFYPGEEKNDPELAKAFAELADIYVNDAFGAAHRAHASTEGIAHYL-PAVAGFLMEKEIEVLGKALS 183          
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_BACME (Phosphoglycerate kinase OS=Bacillus megaterium GN=pgk PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.740e-53
Identity = 110/188 (58.51%), Postives = 142/188 (75.53%), Query Frame = 3
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            M KK++ ++   D+KGK+VF R D NVP+ D + +TD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG V  +  L  +  RL  LLG  V KAD+  G EV+K +  + EG VL+LENVRFY  EEKNDPE AK  A LAD+YVNDAFG AHRAHASTEG+ +++ P+VAGFL++KELD L  A+S
Sbjct:    1 MNKKTLKDI---DVKGKRVFCRVDFNVPMKDGK-VTDETRIRAAIPTIQYLVEQGAKVILASHLGRPKGEVVEELRLNAVAERLQALLGKDVAKADEAFGEEVKKTIDGMSEGDVLVLENVRFYPGEEKNDPELAKAFAELADVYVNDAFGAAHRAHASTEGIAQHI-PAVAGFLMEKELDVLSKALS 183          
The following BLAST results are available for this feature:
BLAST of FC899927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_BACP27.810e-5460.11Phosphoglycerate kinase OS=Bacillus pumilus (strai... [more]
PGK_PROA21.020e-5356.38Phosphoglycerate kinase OS=Prosthecochloris aestua... [more]
PGK_BACCZ1.020e-5359.04Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACSU1.332e-5359.57Phosphoglycerate kinase OS=Bacillus subtilis GN=pg... [more]
PGK_BACCQ1.332e-5359.04Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC71.332e-5359.04Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC41.332e-5359.04Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_PELLD1.740e-5356.83Phosphoglycerate kinase OS=Pelodictyon luteolum (s... [more]
PGK_GEOSW1.740e-5360.11Phosphoglycerate kinase OS=Geobacillus sp. (strain... [more]
PGK_BACME1.740e-5358.51Phosphoglycerate kinase OS=Bacillus megaterium GN=... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA92AG12RM1 IVIA1 Citrus clementina cDNA clone IC0AAA92AG12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC899927 ID=FC899927; Name=FC899927; organism=Citrus clementina; type=EST; length=807bp
TTGCGCCTTTACTACGCCCCTCCACTCCCGCCATATCAATGGCTTCAGCC
ACCGCTCCCACTACTTTCTCTCTCGTCAAAACCGCCGCAAGTTCATCCCT
TTCTTCCCCACGCGCCTCCTTCCTGCGCATGCCCACTTCAGCATCCCGCA
GGCTGGGGTTCTCCGCAGCCGACCCGCTGCTGACCTGCCATGTGGCGTCG
AGGCTGAGCTCGATTAAGACGAAGGGCACTCGTGCGGTGGTGTCGATGGC
GAAGAAGAGCGTGGGGGAGTTGAGTGGAGCTGATTTGAAAGGGAAGAAGG
TGTTTGTAAGAGCTGACTTGAATGTGCCTTTGGATGATAATCAGAACATT
ACTGATGATACTAGAATCAGAGCTGCTGTTCCCACCATCAAGCATTTGAT
TCAAAATGGAGCTAAAGTCATTCTTTCTAGCCACTTGGGAAGACCAAAGG
GTGTTACTCCGAAATTCAGTTTGGCTCCTCTTGTGCCTCGTCTTTCTGAA
CTCCTGGGCATTCAGGTTGTGAAGGCTGATGACTGCATTGGTCCAGAGGT
AGAAAAGCTTGTAGCCTCACTTCCTGAAGGCGGTGTTCTTCTTCTTGAAA
ACGTGAGGTTCTACAAAGAGGAGGAAAAAAACGATCCTGAGTTTGCCAAG
AAGCTTGCCTCTTTGGCAGATCTCTATGTCAATGATGCTTTTGGGACCGC
TCACAGAGCCCATGCCTCAACTGAGGGAGTCACAAAATATTTGAAGCCTT
CTGTTGCTGGTTTCCTCTTGCAGAAGGAACTGGACTACCTTGTTGGGGCG
GTTTCAA
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