FC899927

Overview
NameFC899927
Unique NameFC899927
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length807
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_PROVI (Phosphoglycerate kinase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=pgk PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.272e-53
Identity = 102/183 (55.74%), Postives = 142/183 (77.60%), Query Frame = 3
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYL 791
            M KK++ +++   ++GK++ +R D NVPL+D + ITDD RI  A+P+I+ ++ NG ++IL SHLGRPKG V P FSLAP+  +LSEL+   V  A+DCIG EV +   +L +G V+LLEN+RF+ EEE NDPEFAK+LA+L ++YVNDAFGTAHRAHASTEG+T ++  +VAG+L++KEL YL
Sbjct:    1 MQKKTLSDIT---IQGKRILMRVDFNVPLNDEREITDDKRIVEALPSIRKILDNGGRLILMSHLGRPKGKVNPIFSLAPVAAKLSELIDTPVAMAEDCIGTEVMQSALALQDGEVMLLENLRFHPEEEANDPEFAKELAALGEMYVNDAFGTAHRAHASTEGITHFVPTAVAGYLIEKELMYL 180          
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_CHLPD (Phosphoglycerate kinase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=pgk PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.272e-53
Identity = 104/183 (56.83%), Postives = 142/183 (77.60%), Query Frame = 3
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYL 791
            M KK++ +++   ++GK+V +R D NVP+D+ +NITDD RI  A+P+IK +I  G ++IL SHLGRPKG V  +FSLAP+  RLSELL   V  A DCIG EV +   +L +G V+LLEN+RF+ EEE N+P+FAK+LASL +++VNDAFGTAHRAHASTEG+T Y+  +VAG+L++KEL+YL
Sbjct:    1 MQKKTLSDVA---IQGKRVLMRVDFNVPIDEEKNITDDKRIVEALPSIKKIIDGGGRLILMSHLGRPKGKVNAEFSLAPVAHRLSELLDTPVAMAKDCIGTEVMQAALALQDGEVMLLENLRFHAEEEANNPDFAKELASLGEIFVNDAFGTAHRAHASTEGITHYVPVAVAGYLIEKELNYL 180          
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_BACWK (Phosphoglycerate kinase OS=Bacillus weihenstephanensis (strain KBAB4) GN=pgk PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.968e-53
Identity = 111/188 (59.04%), Postives = 143/188 (76.06%), Query Frame = 3
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++LI+ GAKVIL+SHLGRPKG    +  L P+  RL ELLG  V KAD+  GP  +++VA++ EG VL+LENVRFY  EEKND E AK+ A+LAD++VNDAFG AHRAHAST G+  YL P+V+G L++KELD L  A+S
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLIEQGAKVILASHLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELDVLGKALS 183          
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_BACC2 (Phosphoglycerate kinase OS=Bacillus cereus (strain G9842) GN=pgk PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.876e-53
Identity = 110/188 (58.51%), Postives = 143/188 (76.06%), Query Frame = 3
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG    +  L P+  RL ELLG  V KAD+  GP  +++VA++ EG VL+LENVRFY  EEKND E AK+ A+LAD++VNDAFG AHRAHAST G+  YL P+V+G L++KELD L  A+S
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELDVLGKALS 183          
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_ANOFW (Phosphoglycerate kinase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=pgk PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.876e-53
Identity = 113/188 (60.11%), Postives = 142/188 (75.53%), Query Frame = 3
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            M KK+V ++   D+KGK+VF R D NVP+  N  +TDDTRIRAA+PTI++L++ GAKVIL+SHLGRPKG V  +  L  +  RLSELLG +VVK D+  G  V+  +A + EG VLLLENVRFY  EEKNDPE AK  A LAD+YVNDAFG AHRAHASTEG+  +L P+VAGFL++KE++ L  A+S
Sbjct:    1 MNKKTVRDI---DVKGKRVFCRVDFNVPMQ-NGVVTDDTRIRAALPTIQYLMEQGAKVILASHLGRPKGKVVEEMRLNAVAERLSELLGKRVVKTDEAYGDTVKAAIAEMNEGDVLLLENVRFYPGEEKNDPELAKAFAELADVYVNDAFGAAHRAHASTEGIAHHL-PAVAGFLMEKEIEVLGKALS 183          
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_PELPB (Phosphoglycerate kinase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.062e-53
Identity = 103/183 (56.28%), Postives = 142/183 (77.60%), Query Frame = 3
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYL 791
            M KKS+ +++   ++GK+V +R D NVPLD N+ ITDD RI  ++P+IK +++NG ++IL SHLGRPKG V   +SLAP+  RL+ELL   V  A +CIG E  + V +L +G V+LLEN+RF+ EEE NDP+FA++LASL ++YVNDAFGTAHRAHASTEG+T Y++ +VAGFL+++EL YL
Sbjct:    1 MQKKSLSDIA---IQGKRVLMRVDFNVPLDSNKKITDDKRIIESLPSIKKVLENGGRLILMSHLGRPKGKVNADYSLAPVATRLAELLDCPVTMAKECIGTETMQQVLALQDGEVILLENLRFHPEEEANDPDFARELASLGEVYVNDAFGTAHRAHASTEGITHYVQTAVAGFLIERELLYL 180          
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_GEOSF (Phosphoglycerate kinase OS=Geobacter sp. (strain FRC-32) GN=pgk PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.062e-53
Identity = 104/176 (59.09%), Postives = 133/176 (75.57%), Query Frame = 3
Query:  282 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVT-PKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            DL+ K VF+R D NVP DDN NIT+DTRI  AVPTIK+ I+NGAKVIL+SHLGRPKG   PK+++AP   RLSELLG +V +A DC GP+V+ +VA+L  G VL+LENVRFY  EEKNDP+FA KLA+  ++YVNDAF  +HRAHAS   +TK +    AGFL++ E+ +   A++
Sbjct:   11 DLREKLVFIRVDFNVPQDDNGNITEDTRIVGAVPTIKYAIENGAKVILASHLGRPKGEKKPKYTMAPAARRLSELLGKEVKQATDCFGPDVDAMVAALQPGDVLMLENVRFYPGEEKNDPDFACKLANGCEIYVNDAFAVSHRAHASVHAITKCIPVIAAGFLMKNEMTFFEKAMT 186          
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_ACIBL (Phosphoglycerate kinase OS=Acidobacteria bacterium (strain Ellin345) GN=pgk PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.062e-53
Identity = 110/194 (56.70%), Postives = 140/194 (72.16%), Query Frame = 3
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGV-TPKFSLAPLVPRLSELL------GIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            M+K S+ +L    L  K+VF+R D NVPLD+N  +TDDTRIR  +PTI++ +++GAK+IL SHLGRPKG   PK SL P+  RL  +L      G  V  + DCIG + +++   L +G  LLLENVRF+ EEEKNDP FAK+LASL +LYVNDAFG+AHRAHASTEG+T Y++ S AG L+QKELDYL  A S
Sbjct:    1 MSKLSIKDLQ---LSNKRVFMRVDFNVPLDENGRVTDDTRIRETLPTIEYALRHGAKLILCSHLGRPKGKPNPKMSLKPVAERLRVMLDHAISPGQNVGFSPDCIGMQAQEMAKQLEKGQALLLENVRFHAEEEKNDPAFAKELASLCELYVNDAFGSAHRAHASTEGITHYVEKSAAGLLMQKELDYLGKATS 191          
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_MOOTA (Phosphoglycerate kinase OS=Moorella thermoacetica (strain ATCC 39073) GN=pgk PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 6.612e-53
Identity = 113/188 (60.11%), Postives = 143/188 (76.06%), Query Frame = 3
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            MAK ++ +L   +L  K+V VR D NVPL+  + +TD+TRIRAA+PTI++L+ +GA+VIL SHLGRPKG V  +  L P+   L  LLG QV K +DC+GPEVE   A+L  G VLLLEN+RF+ EEEKNDP FA++LASLAD+YVNDAFG AHRAHASTEGV  YL P+ AGFLLQKE++ L  A++
Sbjct:    1 MAKLTLKDL---ELNNKRVLVRVDFNVPLEAGR-VTDNTRIRAALPTIEYLLDHGARVILMSHLGRPKGKVKEELRLDPVARELESLLGRQVHKVNDCVGPEVEAAAAALKPGEVLLLENLRFHPEEEKNDPGFARQLASLADVYVNDAFGAAHRAHASTEGVAHYL-PAAAGFLLQKEIETLGKALA 183          
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_EXISA (Phosphoglycerate kinase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=pgk PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 8.635e-53
Identity = 109/188 (57.98%), Postives = 141/188 (75.00%), Query Frame = 3
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVT-PKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            M K+S+ ++   D+KGK+VF R D NVPL D   I D+TRI+AA+PTIKHL+  GAK++L+SHLGRPKG   P+FSLAP+  RL+ELLG  V   ++  GP  E+ VA+L EG V++LENVRFY  E KNDPE AK  A+LAD+YVNDAFG AHRAHASTEG+  ++  +VAG L++KEL+ L  A+S
Sbjct:    1 MNKQSIRDI---DVKGKRVFCRVDFNVPLKDGV-IQDETRIQAALPTIKHLLDGGAKLVLASHLGRPKGEKKPEFSLAPVAKRLAELLGKDVPLVEEAYGPVAEEAVANLSEGDVVVLENVRFYPGETKNDPELAKGFAALADVYVNDAFGAAHRAHASTEGIAHHVDTAVAGLLMEKELEVLGKALS 184          
The following BLAST results are available for this feature:
BLAST of FC899927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_PROVI2.272e-5355.74Phosphoglycerate kinase OS=Prosthecochloris vibrio... [more]
PGK_CHLPD2.272e-5356.83Phosphoglycerate kinase OS=Chlorobium phaeobactero... [more]
PGK_BACWK2.968e-5359.04Phosphoglycerate kinase OS=Bacillus weihenstephane... [more]
PGK_BACC23.876e-5358.51Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_ANOFW3.876e-5360.11Phosphoglycerate kinase OS=Anoxybacillus flavither... [more]
PGK_PELPB5.062e-5356.28Phosphoglycerate kinase OS=Pelodictyon phaeoclathr... [more]
PGK_GEOSF5.062e-5359.09Phosphoglycerate kinase OS=Geobacter sp. (strain F... [more]
PGK_ACIBL5.062e-5356.70Phosphoglycerate kinase OS=Acidobacteria bacterium... [more]
PGK_MOOTA6.612e-5360.11Phosphoglycerate kinase OS=Moorella thermoacetica ... [more]
PGK_EXISA8.635e-5357.98Phosphoglycerate kinase OS=Exiguobacterium sp. (st... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA92AG12RM1 IVIA1 Citrus clementina cDNA clone IC0AAA92AG12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC899927 ID=FC899927; Name=FC899927; organism=Citrus clementina; type=EST; length=807bp
TTGCGCCTTTACTACGCCCCTCCACTCCCGCCATATCAATGGCTTCAGCC
ACCGCTCCCACTACTTTCTCTCTCGTCAAAACCGCCGCAAGTTCATCCCT
TTCTTCCCCACGCGCCTCCTTCCTGCGCATGCCCACTTCAGCATCCCGCA
GGCTGGGGTTCTCCGCAGCCGACCCGCTGCTGACCTGCCATGTGGCGTCG
AGGCTGAGCTCGATTAAGACGAAGGGCACTCGTGCGGTGGTGTCGATGGC
GAAGAAGAGCGTGGGGGAGTTGAGTGGAGCTGATTTGAAAGGGAAGAAGG
TGTTTGTAAGAGCTGACTTGAATGTGCCTTTGGATGATAATCAGAACATT
ACTGATGATACTAGAATCAGAGCTGCTGTTCCCACCATCAAGCATTTGAT
TCAAAATGGAGCTAAAGTCATTCTTTCTAGCCACTTGGGAAGACCAAAGG
GTGTTACTCCGAAATTCAGTTTGGCTCCTCTTGTGCCTCGTCTTTCTGAA
CTCCTGGGCATTCAGGTTGTGAAGGCTGATGACTGCATTGGTCCAGAGGT
AGAAAAGCTTGTAGCCTCACTTCCTGAAGGCGGTGTTCTTCTTCTTGAAA
ACGTGAGGTTCTACAAAGAGGAGGAAAAAAACGATCCTGAGTTTGCCAAG
AAGCTTGCCTCTTTGGCAGATCTCTATGTCAATGATGCTTTTGGGACCGC
TCACAGAGCCCATGCCTCAACTGAGGGAGTCACAAAATATTTGAAGCCTT
CTGTTGCTGGTTTCCTCTTGCAGAAGGAACTGGACTACCTTGTTGGGGCG
GTTTCAA
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