FC899927

Overview
NameFC899927
Unique NameFC899927
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length807
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_BACHK (Phosphoglycerate kinase OS=Bacillus thuringiensis subsp. konkukian GN=pgk PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.128e-52
Identity = 109/188 (57.98%), Postives = 143/188 (76.06%), Query Frame = 3 
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG    +  L P+  RL ELLG  V KAD+  GP  +++VA++ EG VL+LENVRFY  EEKND E AK+ A+LAD++VNDAFG AHRAHAST G+  YL P+V+G L++KEL+ L  A+S
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELEVLGKALS 183
[Close]
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_BACC3 (Phosphoglycerate kinase OS=Bacillus cereus (strain 03BB102) GN=pgk PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.128e-52
Identity = 109/188 (57.98%), Postives = 143/188 (76.06%), Query Frame = 3 
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG    +  L P+  RL ELLG  V KAD+  GP  +++VA++ EG VL+LENVRFY  EEKND E AK+ A+LAD++VNDAFG AHRAHAST G+  YL P+V+G L++KEL+ L  A+S
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELEVLGKALS 183
[Close]
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_BACC0 (Phosphoglycerate kinase OS=Bacillus cereus (strain AH820) GN=pgk PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.128e-52
Identity = 109/188 (57.98%), Postives = 143/188 (76.06%), Query Frame = 3 
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG    +  L P+  RL ELLG  V KAD+  GP  +++VA++ EG VL+LENVRFY  EEKND E AK+ A+LAD++VNDAFG AHRAHAST G+  YL P+V+G L++KEL+ L  A+S
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELEVLGKALS 183
[Close]
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_BACAN (Phosphoglycerate kinase OS=Bacillus anthracis GN=pgk PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.128e-52
Identity = 109/188 (57.98%), Postives = 143/188 (76.06%), Query Frame = 3 
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG    +  L P+  RL ELLG  V KAD+  GP  +++VA++ EG VL+LENVRFY  EEKND E AK+ A+LAD++VNDAFG AHRAHAST G+  YL P+V+G L++KEL+ L  A+S
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELEVLGKALS 183
[Close]
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_BACAH (Phosphoglycerate kinase OS=Bacillus thuringiensis (strain Al Hakam) GN=pgk PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.128e-52
Identity = 109/188 (57.98%), Postives = 143/188 (76.06%), Query Frame = 3 
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG    +  L P+  RL ELLG  V KAD+  GP  +++VA++ EG VL+LENVRFY  EEKND E AK+ A+LAD++VNDAFG AHRAHAST G+  YL P+V+G L++KEL+ L  A+S
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELEVLGKALS 183
[Close]
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_BACAC (Phosphoglycerate kinase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=pgk PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.128e-52
Identity = 109/188 (57.98%), Postives = 143/188 (76.06%), Query Frame = 3 
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG    +  L P+  RL ELLG  V KAD+  GP  +++VA++ EG VL+LENVRFY  EEKND E AK+ A+LAD++VNDAFG AHRAHAST G+  YL P+V+G L++KEL+ L  A+S
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELEVLGKALS 183
[Close]
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_BACAA (Phosphoglycerate kinase OS=Bacillus anthracis (strain A0248) GN=pgk PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.128e-52
Identity = 109/188 (57.98%), Postives = 143/188 (76.06%), Query Frame = 3 
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG    +  L P+  RL ELLG  V KAD+  GP  +++VA++ EG VL+LENVRFY  EEKND E AK+ A+LAD++VNDAFG AHRAHAST G+  YL P+V+G L++KEL+ L  A+S
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLMEKELEVLGKALS 183
[Close]
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_GEOMG (Phosphoglycerate kinase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=pgk PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.473e-52
Identity = 105/187 (56.15%), Postives = 136/187 (72.73%), Query Frame = 3 
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVT-PKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAV 803
            MA + + E+    LKGKKVF+R D NVPLD++QNIT+DTRIRA +PTI   +  GAKVIL+SHLGRPKG   PK+S+AP   RLS LL  +V  A DCIG EV+K++ ++  G VLLLENVRFY+ EEKND +FAK LA+  ++Y+NDAF  +HRAHAS E +TK+     AGFL+  E++Y   A+
Sbjct:    1 MAIRYIDEIES--LKGKKVFIRVDFNVPLDEHQNITEDTRIRAVLPTINFALDAGAKVILASHLGRPKGERKPKYSMAPAAKRLSRLLNKEVQLAPDCIGDEVKKMIDAMKPGEVLLLENVRFYEGEEKNDADFAKALANDCEIYINDAFAVSHRAHASVEAITKFFPVVAAGFLMNNEINYFEKAM 185
[Close]
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_GEOLS (Phosphoglycerate kinase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=pgk PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.473e-52
Identity = 99/176 (56.25%), Postives = 133/176 (75.57%), Query Frame = 3 
Query:  282 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTP-KFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            DLKGKKVF+R D NVP D+  NIT+DTRI  AVPTIK+ ++ GAKV+L+SHLGRPKG    K+++AP   RLS+LLG +V++A DC GP+V K++ S+  G V++LENVRFY  EEKNDPEFA++L +  ++YVNDAF  +HRAHAS E +TK +    AGFL++ E+ +   A+S
Sbjct:   11 DLKGKKVFIRVDFNVPQDEKGNITEDTRIAGAVPTIKYAVEQGAKVVLASHLGRPKGEKKSKYTMAPAAKRLSQLLGKKVMQAPDCFGPDVSKIIDSMKPGDVVMLENVRFYPGEEKNDPEFAQQLVNGCEIYVNDAFAVSHRAHASVEAITKLVPTIAAGFLMKNEMTFFDKAMS 186
[Close]
BLAST of FC899927 vs. ExPASy Swiss-Prot
Match: PGK_BACST (Phosphoglycerate kinase OS=Bacillus stearothermophilus GN=pgk PE=1 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 1.924e-52
Identity = 113/188 (60.11%), Postives = 140/188 (74.47%), Query Frame = 3 
Query:  246 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVS 806
            M KK++ ++   D++GK+VF R D NVP++    ITDDTRIRAA+PTI++LI++GAKVIL+SHLGRPKG V  +  L  +  RL ELL   V K ++ +G EV+  V  L EG VLLLENVRFY  EEKNDPE AK  A LADLYVNDAFG AHRAHASTEG+  YL P+VAGFL++KEL+ L  A+S
Sbjct:    1 MNKKTIRDV---DVRGKRVFCRVDFNVPMEQGA-ITDDTRIRAALPTIRYLIEHGAKVILASHLGRPKGKVVEELRLDAVAKRLGELLERPVAKTNEAVGDEVKAAVDRLNEGDVLLLENVRFYPGEEKNDPELAKAFAELADLYVNDAFGAAHRAHASTEGIAHYL-PAVAGFLMEKELEVLGKALS 183
The following BLAST results are available for this feature:
BLAST of FC899927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_BACHK1.128e-5257.98Phosphoglycerate kinase OS=Bacillus thuringiensis ... [more]
PGK_BACC31.128e-5257.98Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC01.128e-5257.98Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACAN1.128e-5257.98Phosphoglycerate kinase OS=Bacillus anthracis GN=p... [more]
PGK_BACAH1.128e-5257.98Phosphoglycerate kinase OS=Bacillus thuringiensis ... [more]
PGK_BACAC1.128e-5257.98Phosphoglycerate kinase OS=Bacillus anthracis (str... [more]
PGK_BACAA1.128e-5257.98Phosphoglycerate kinase OS=Bacillus anthracis (str... [more]
PGK_GEOMG1.473e-5256.15Phosphoglycerate kinase OS=Geobacter metallireduce... [more]
PGK_GEOLS1.473e-5256.25Phosphoglycerate kinase OS=Geobacter lovleyi (stra... [more]
PGK_BACST1.924e-5260.11Phosphoglycerate kinase OS=Bacillus stearothermoph... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA92AG12RM1 IVIA1 Citrus clementina cDNA clone IC0AAA92AG12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC899927 ID=FC899927; Name=FC899927; organism=Citrus clementina; type=EST; length=807bp
TTGCGCCTTTACTACGCCCCTCCACTCCCGCCATATCAATGGCTTCAGCC
ACCGCTCCCACTACTTTCTCTCTCGTCAAAACCGCCGCAAGTTCATCCCT
TTCTTCCCCACGCGCCTCCTTCCTGCGCATGCCCACTTCAGCATCCCGCA
GGCTGGGGTTCTCCGCAGCCGACCCGCTGCTGACCTGCCATGTGGCGTCG
AGGCTGAGCTCGATTAAGACGAAGGGCACTCGTGCGGTGGTGTCGATGGC
GAAGAAGAGCGTGGGGGAGTTGAGTGGAGCTGATTTGAAAGGGAAGAAGG
TGTTTGTAAGAGCTGACTTGAATGTGCCTTTGGATGATAATCAGAACATT
ACTGATGATACTAGAATCAGAGCTGCTGTTCCCACCATCAAGCATTTGAT
TCAAAATGGAGCTAAAGTCATTCTTTCTAGCCACTTGGGAAGACCAAAGG
GTGTTACTCCGAAATTCAGTTTGGCTCCTCTTGTGCCTCGTCTTTCTGAA
CTCCTGGGCATTCAGGTTGTGAAGGCTGATGACTGCATTGGTCCAGAGGT
AGAAAAGCTTGTAGCCTCACTTCCTGAAGGCGGTGTTCTTCTTCTTGAAA
ACGTGAGGTTCTACAAAGAGGAGGAAAAAAACGATCCTGAGTTTGCCAAG
AAGCTTGCCTCTTTGGCAGATCTCTATGTCAATGATGCTTTTGGGACCGC
TCACAGAGCCCATGCCTCAACTGAGGGAGTCACAAAATATTTGAAGCCTT
CTGTTGCTGGTTTCCTCTTGCAGAAGGAACTGGACTACCTTGTTGGGGCG
GTTTCAA
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