FC899928
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_SERP5 (Probable ubiquinone biosynthesis protein ubiB OS=Serratia proteamaculans (strain 568) GN=ubiB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.406e-14 Identity = 43/126 (34.13%), Postives = 67/126 (53.17%), Query Frame = 3 Query: 456 PLILLRRVFQVGTTFGWWFGSRFVDELMERSDQMFPVRAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQAR 833 P + L +VG +W +R D+ + LR L ELGP ++K Q +S+R DL PP D+L+LLQD++ PF +A IE +G P++ F + + +A+AS+ QV+ AR Sbjct: 26 PQMRLTLPLRVGRRLLFWMPNRHADKPL----------GERLRLALQELGPVWIKFGQMMSTRRDLFPPQIADQLTLLQDRVAPFDGALARKHIELAMGGPLETWFDDFDQQALASASIAQVHTAR 141
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_VIBC3 (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=ubiB PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.366e-14 Identity = 37/85 (43.53%), Postives = 55/85 (64.71%), Query Frame = 3 Query: 579 LRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQAR 833 LR L ELGP ++K Q +S+R DL PP D L++LQD++ PF A IE+ELG P++ F + +P+A+AS+ QV+ A+ Sbjct: 57 LRLALQELGPVWIKFGQMMSTRRDLFPPYIADPLAMLQDKVAPFDGLQAKQLIEEELGAPLETWFDDFDIKPLASASIAQVHTAK 141
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_ENT38 (Probable ubiquinone biosynthesis protein ubiB OS=Enterobacter sp. (strain 638) GN=ubiB PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.366e-14 Identity = 45/127 (35.43%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 456 PLILLRRVFQVGTTFGWWFGSRFVDELMERSDQMFPVRAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELG-LPIDELFSEISPEPVAAASLGQVYQAR 833 PL + RR+ +W +R D+L+ LR L ELGP ++K Q +S+R DL PP D+L+LLQD++ PF A IE+ +G +P++ F + +P+A+AS+ QV+ AR Sbjct: 33 PLRIWRRML-------FWMPNRHKDKLL----------GERLRLALQELGPVWIKFGQMLSTRRDLFPPQIADQLALLQDRVAPFDGARAKQQIEEAMGNIPVETWFDDFDIKPLASASIAQVHTAR 142
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_PHOPR (Probable ubiquinone biosynthesis protein ubiB OS=Photobacterium profundum GN=ubiB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.093e-13 Identity = 38/84 (45.24%), Postives = 53/84 (63.10%), Query Frame = 3 Query: 579 LRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQA 830 LR L ELGP ++K Q +S+R DL PP D+L+LLQDQ+ PF +A +E LG PI+ F + P+A+AS+ QV+ A Sbjct: 58 LRLALQELGPVWIKFGQMMSTRRDLFPPHIADQLALLQDQVEPFDGNLAKEHMELSLGGPIETWFDDFDETPLASASIAQVHTA 141
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_ENTS8 (Probable ubiquinone biosynthesis protein ubiB OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=ubiB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.093e-13 Identity = 49/141 (34.75%), Postives = 75/141 (53.19%), Query Frame = 3 Query: 468 LRRVFQVGTTFGWWFGSRFVDELMERSDQMFPVR------------------AAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELG-LPIDELFSEISPEPVAAASLGQVYQAR 833 +RR++ + TF S +DEL+ R P+R LR L ELGP ++K Q +S+R DL PP D+L+LLQD++ PF ++A IE+ +G P++E F + P+A+AS+ QV+ AR Sbjct: 6 IRRLYFIIKTFL----SYGLDELIPRMRLTLPLRIWRRGLFWMPNRHKDLELGTRLRLALQELGPVWIKFGQMLSTRRDLFPPVIADQLALLQDRVAPFDGKLAKQQIEKAMGDRPVEEWFDDFDITPLASASIAQVHTAR 142
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_ECOUT (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli (strain UTI89 / UPEC) GN=ubiB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.093e-13 Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 3 Query: 579 LRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQEL-GLPIDELFSEISPEPVAAASLGQVYQAR 833 LR L ELGP ++K Q +S+R DL PP D+L+LLQD++ PF ++A IE + GLP++ F + +P+A+AS+ QV+ AR Sbjct: 57 LRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTAR 142
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_ECOSM (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=ubiB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.093e-13 Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 3 Query: 579 LRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQEL-GLPIDELFSEISPEPVAAASLGQVYQAR 833 LR L ELGP ++K Q +S+R DL PP D+L+LLQD++ PF ++A IE + GLP++ F + +P+A+AS+ QV+ AR Sbjct: 57 LRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTAR 142
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_ECOLU (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=ubiB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.093e-13 Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 3 Query: 579 LRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQEL-GLPIDELFSEISPEPVAAASLGQVYQAR 833 LR L ELGP ++K Q +S+R DL PP D+L+LLQD++ PF ++A IE + GLP++ F + +P+A+AS+ QV+ AR Sbjct: 57 LRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTAR 142
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_ECOL6 (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli O6 GN=ubiB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.093e-13 Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 3 Query: 579 LRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQEL-GLPIDELFSEISPEPVAAASLGQVYQAR 833 LR L ELGP ++K Q +S+R DL PP D+L+LLQD++ PF ++A IE + GLP++ F + +P+A+AS+ QV+ AR Sbjct: 57 LRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTAR 142
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_ECOL5 (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=ubiB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.093e-13 Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 3 Query: 579 LRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQEL-GLPIDELFSEISPEPVAAASLGQVYQAR 833 LR L ELGP ++K Q +S+R DL PP D+L+LLQD++ PF ++A IE + GLP++ F + +P+A+AS+ QV+ AR Sbjct: 57 LRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTAR 142 The following BLAST results are available for this feature:
BLAST of FC899928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 167
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Sequences
The
following sequences are available for this feature:
EST sequence >FC899928 ID=FC899928; Name=FC899928; organism=Citrus clementina; type=EST; length=835bpback to top |