FC899928
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_PHOLL (Probable ubiquinone biosynthesis protein ubiB OS=Photorhabdus luminescens subsp. laumondii GN=ubiB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.691e-12 Identity = 43/126 (34.13%), Postives = 65/126 (51.59%), Query Frame = 3 Query: 456 PLILLRRVFQVGTTFGWWFGSRFVDELMERSDQMFPVRAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQAR 833 P I L + G +W +R D+ + LR L ELGP ++K Q +S+R DL PP+ D+L+LLQD++ F +A IE LG ++ F + P +A+AS+ QV+ AR Sbjct: 26 PRIRLTWPLRFGRYLLFWIPNRHKDKSL----------GERLRLALQELGPVWIKFGQMLSTRRDLFPPAIADQLALLQDRVASFDGALARQYIETALGGALETWFDDFEPIALASASIAQVHTAR 141
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_SHEON (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella oneidensis GN=ubiB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.515e-12 Identity = 34/84 (40.48%), Postives = 54/84 (64.29%), Query Frame = 3 Query: 579 LRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQA 830 L+ + ELGP Y+K+ Q +S+R DL+ + EL++LQD++ PF +A IE EL PI+ F + + P+A+AS+ QV+ A Sbjct: 57 LKLAMQELGPVYIKLGQMLSTRRDLLSDEWATELAMLQDKVPPFDGALARLAIEAELKAPIETFFDDFNETPLASASISQVHTA 140
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_SHESW (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella sp. (strain W3-18-1) GN=ubiB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.023e-11 Identity = 34/84 (40.48%), Postives = 53/84 (63.10%), Query Frame = 3 Query: 579 LRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQA 830 L+ + ELGP Y+K+ Q +S+R DL+ + EL++LQD++ PF +A IE EL I+ LF + P+A+AS+ QV+ A Sbjct: 57 LKLAMQELGPVYIKLGQMLSTRRDLLSDEWAIELAMLQDKVPPFDGVLARKAIEAELKASIESLFDDFDETPLASASISQVHTA 140
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_SHEPC (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=ubiB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.023e-11 Identity = 34/84 (40.48%), Postives = 53/84 (63.10%), Query Frame = 3 Query: 579 LRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQA 830 L+ + ELGP Y+K+ Q +S+R DL+ + EL++LQD++ PF +A IE EL I+ LF + P+A+AS+ QV+ A Sbjct: 57 LKLAMQELGPVYIKLGQMLSTRRDLLSDEWAIELAMLQDKVPPFDGVLARKAIEAELKASIESLFDDFDETPLASASISQVHTA 140
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: Y5520_ARATH (Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic OS=Arabidopsis thaliana GN=At5g05200 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.278e-11 Identity = 31/85 (36.47%), Postives = 50/85 (58.82%), Query Frame = 3 Query: 579 LRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQAR 833 LRK+ +G Y+K+ Q ++S P L PP Y+ E D+ P E +++ELG PI+ ++ + P P+A+AS+ QV+ AR Sbjct: 129 LRKLFERMGATYIKLGQFIASAPTLFPPEYVKEFQNCFDKAPPVPFEEIRKILQEELGRPIESVYEYVDPTPIASASIAQVHGAR 213
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_HAEPS (Probable ubiquinone biosynthesis protein ubiB OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=ubiB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.886e-11 Identity = 43/126 (34.13%), Postives = 69/126 (54.76%), Query Frame = 3 Query: 456 PLILLRRVFQVGTTFGWWFGSRFVDELMERSDQMFPVRAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQAR 833 P I L R + G +W +++ +E F VR LR L ELGP ++K+ Q +S+R DL P D+L+LLQD + F ++A IE+ LG +++ F + +A+AS+ QV+ A+ Sbjct: 26 PDIPLTRGIRCGRKSLFWVKNQYPNE-------PFGVR---LRLALQELGPVWIKLGQMLSTRRDLFEPELADQLALLQDSVEAFDGKLARRLIEEALGDKLEKWFDDFDETALASASIAQVHIAK 141
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: YHG1_CLOPA (Uncharacterized protein in hydrogenase 1 5'region (Fragment) OS=Clostridium pasteurianum PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.076e-11 Identity = 43/131 (32.82%), Postives = 66/131 (50.38%), Query Frame = 3 Query: 438 SVYRRKPLILLRRVFQVGTTFGWWFGSRFVDELMERSDQMFPVRAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQA 830 SVYR K ++ + ++G F+ + ++ P LRK ELGP ++KI Q +S+RPDL+P Y+ ELS LQ+ + P + N +EL ID F P+ +AS+ QV+ A Sbjct: 2 SVYRLKEIVKVLA----------YYGFGFIVDSKLNGNKKSP---ENLRKAFEELGPTFIKIGQILSTRPDLLPLPYIKELSKLQNNVPPENFIDIENLFFEELSSTIDNTFLYFDKTPIGSASIAQVHDA 119 The following BLAST results are available for this feature:
BLAST of FC899928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 167
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Sequences
The
following sequences are available for this feature:
EST sequence >FC899928 ID=FC899928; Name=FC899928; organism=Citrus clementina; type=EST; length=835bpback to top |