FC899928
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_PSEPG (Probable ubiquinone biosynthesis protein ubiB OS=Pseudomonas putida (strain GB-1) GN=ubiB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.167e-15 Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 3 Query: 567 RAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQAR 833 R A LR L +LGP ++K Q +S+R DL+P DEL LLQD++ PF + A IE++LG + E+FS EP+A+AS+ QV+ AR Sbjct: 56 RGARLRLALQDLGPIFIKFGQLLSTRRDLLPTDIADELMLLQDRVPPFDPQKAVALIEEQLGAKVGEVFSRFDVEPLASASVAQVHAAR 144
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_HAHCH (Probable ubiquinone biosynthesis protein ubiB OS=Hahella chejuensis (strain KCTC 2396) GN=ubiB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.167e-15 Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 3 Query: 567 RAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQA 830 R LR+ L ELGP +VK Q +S+R DL+P DEL LQD++ PF+S++A IE+ L P+ ELF++ P+A+AS+ QV+ A Sbjct: 51 RGERLRRALEELGPIFVKFGQILSTRKDLLPEDLADELKRLQDKVPPFASDMAVRIIEESLKSPVSELFADFQTYPMASASIAQVHAA 138
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_DIAST (Probable ubiquinone biosynthesis protein ubiB OS=Diaphorobacter sp. (strain TPSY) GN=ubiB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.167e-15 Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 3 Query: 567 RAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQA 830 R LR+ L LGP +VK Q +S+R DL+PP DEL+LLQD++ PF +VA TIE+ PI E+F +PVA+AS+ QV+ A Sbjct: 49 RGQRLREALESLGPIFVKFGQVLSTRRDLMPPDIADELALLQDRVPPFDPDVAIATIERAFRRPIGEVFVSFDRQPVASASIAQVHFA 136
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_ACISJ (Probable ubiquinone biosynthesis protein ubiB OS=Acidovorax sp. (strain JS42) GN=ubiB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.167e-15 Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 3 Query: 567 RAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQA 830 R LR+ L LGP +VK Q +S+R DL+PP DEL+LLQD++ PF +VA TIE+ PI E+F +PVA+AS+ QV+ A Sbjct: 49 RGQRLREALESLGPIFVKFGQVLSTRRDLMPPDIADELALLQDRVPPFDPDVAIATIERAFRRPIGEVFVSFDRQPVASASIAQVHFA 136
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_PSEFS (Probable ubiquinone biosynthesis protein ubiB OS=Pseudomonas fluorescens (strain SBW25) GN=ubiB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.525e-15 Identity = 40/89 (44.94%), Postives = 59/89 (66.29%), Query Frame = 3 Query: 567 RAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQAR 833 R A LR L +LGP ++K Q +S+R DL+P DEL LLQD++ PF S+ + IE++LG I E+FS +P+A+AS+ QV+ A+ Sbjct: 55 RGARLRLALQDLGPIFIKFGQILSTRRDLLPEDIADELMLLQDRVPPFDSQQSMKLIEEQLGKKISEVFSRFDVDPLASASVAQVHAAQ 143
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_PSEE4 (Probable ubiquinone biosynthesis protein ubiB OS=Pseudomonas entomophila (strain L48) GN=ubiB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.525e-15 Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 3 Query: 567 RAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQAR 833 R A LR L +LGP ++K Q +S+R DL+P DEL LLQD++ PF + A IE++LG + E+FS EP+A+AS+ QV+ AR Sbjct: 56 RGARLRLALQDLGPIFIKFGQLLSTRRDLLPTDIADELMLLQDRVPPFDPQHAVALIEEQLGAKVGEVFSRFDVEPLASASVAQVHAAR 144
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_PASMU (Probable ubiquinone biosynthesis protein ubiB OS=Pasteurella multocida GN=ubiB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.525e-15 Identity = 42/98 (42.86%), Postives = 63/98 (64.29%), Query Frame = 3 Query: 540 ERSDQMFPVRAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQAR 833 + D+ F +R LR L ELGP ++K+ Q +S+R DL PP DEL+LLQDQ+ PF ++A IE+ LG P++ F E + +A+AS+ QV+ A+ Sbjct: 47 QHKDKTFGLR---LRLALQELGPVWIKLGQMLSTRRDLFPPDIADELALLQDQVDPFDGKIARAQIEKALGAPLETWFDEFNETALASASIAQVHTAK 141
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_KLEP3 (Probable ubiquinone biosynthesis protein ubiB OS=Klebsiella pneumoniae (strain 342) GN=ubiB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.525e-15 Identity = 47/127 (37.01%), Postives = 71/127 (55.91%), Query Frame = 3 Query: 456 PLILLRRVFQVGTTFGWWFGSRFVDELMERSDQMFPVRAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQEL-GLPIDELFSEISPEPVAAASLGQVYQAR 833 P I L ++ +W +R D+ + LR L ELGP ++K Q +S+R DL PP D+L+LLQD++ PF ++A IE+ + GLP+D F + S EP+A+AS+ QV+ AR Sbjct: 26 PKIRLTLPLRIWRRMLFWMPNRHQDQPL----------GTRLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDRVAPFEGKLAQQQIEKAMGGLPVDAWFDDFSVEPLASASIAQVHTAR 142
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: Y095_SYNY3 (Uncharacterized protein sll0095 OS=Synechocystis sp. (strain PCC 6803) GN=sll0095 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.991e-15 Identity = 44/96 (45.83%), Postives = 63/96 (65.62%), Query Frame = 3 Query: 543 RSDQMFPVRAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQA 830 RS Q RA L + L+ LGP ++KI Q++S+R D+IP Y++ + LQD++ PF S A IEQEL IDE+F + P+A+ASLGQV++A Sbjct: 49 RSAQRRYRRAQWLVQQLLYLGPTFIKIGQSLSTRADIIPAEYIEAFTQLQDRVPPFDSRQAIAVIEQELHGAIDEIFQQFEVTPLASASLGQVHRA 144
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_PSEPF (Probable ubiquinone biosynthesis protein ubiB OS=Pseudomonas fluorescens (strain Pf0-1) GN=ubiB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.991e-15 Identity = 40/89 (44.94%), Postives = 59/89 (66.29%), Query Frame = 3 Query: 567 RAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQAR 833 R A LR L +LGP ++K Q +S+R DL+P DEL LQD++ PF S+++ IE++LG I E+FS EP+A+AS+ QV+ A+ Sbjct: 55 RGARLRLALQDLGPIFIKFGQILSTRRDLLPEDIADELMRLQDRVPPFDSQLSVKLIEEQLGKKISEVFSRFDVEPLASASVAQVHAAQ 143 The following BLAST results are available for this feature:
BLAST of FC899928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 167
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Sequences
The
following sequences are available for this feature:
EST sequence >FC899928 ID=FC899928; Name=FC899928; organism=Citrus clementina; type=EST; length=835bpback to top |