FC899928
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_SHEPW (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=ubiB PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.875e-14 Identity = 37/89 (41.57%), Postives = 57/89 (64.04%), Query Frame = 3 Query: 564 VRAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQA 830 V L+ + ELGP Y+K Q +S+R DL+ + +EL++LQD++ PF S +A +IEQEL PI+ F + P+A+AS+ QV+ A Sbjct: 52 VGGERLKLAMQELGPVYIKFGQMLSTRRDLLSDEWAEELAMLQDRVPPFDSAIARESIEQELNAPIETYFDDFEDTPLASASISQVHTA 140
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_VIBVY (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio vulnificus (strain YJ016) GN=ubiB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.755e-14 Identity = 39/85 (45.88%), Postives = 56/85 (65.88%), Query Frame = 3 Query: 579 LRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQAR 833 LR L ELGP ++K Q +S+R DL PP D L+LLQDQ++PF +A +EQ LG P++ FS+ P+A+AS+ QV+ A+ Sbjct: 57 LRLALQELGPVWIKFGQMLSTRRDLFPPHIADPLALLQDQVSPFDGALAKAQMEQALGGPLETWFSDFDLVPLASASIAQVHTAK 141
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_VIBVU (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio vulnificus GN=ubiB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.755e-14 Identity = 39/85 (45.88%), Postives = 56/85 (65.88%), Query Frame = 3 Query: 579 LRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQAR 833 LR L ELGP ++K Q +S+R DL PP D L+LLQDQ++PF +A +EQ LG P++ FS+ P+A+AS+ QV+ A+ Sbjct: 57 LRLALQELGPVWIKFGQMLSTRRDLFPPHIADPLALLQDQVSPFDGALAKAQMEQALGGPLETWFSDFDLVPLASASIAQVHTAK 141
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_SHISS (Probable ubiquinone biosynthesis protein ubiB OS=Shigella sonnei (strain Ss046) GN=ubiB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.755e-14 Identity = 42/111 (37.84%), Postives = 65/111 (58.56%), Query Frame = 3 Query: 504 WWFGSRFVDELMERSDQMFPVRAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQEL-GLPIDELFSEISPEPVAAASLGQVYQAR 833 +W +R D+L+ LR L ELGP ++K Q +S+R DL PP D+L+LLQD++ PF ++A IE + GLP++ F + +P+A+AS+ QV+ AR Sbjct: 42 FWMPNRHKDKLL----------GERLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTAR 142
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_SHIFL (Probable ubiquinone biosynthesis protein ubiB OS=Shigella flexneri GN=ubiB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.755e-14 Identity = 42/111 (37.84%), Postives = 65/111 (58.56%), Query Frame = 3 Query: 504 WWFGSRFVDELMERSDQMFPVRAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQEL-GLPIDELFSEISPEPVAAASLGQVYQAR 833 +W +R D+L+ LR L ELGP ++K Q +S+R DL PP D+L+LLQD++ PF ++A IE + GLP++ F + +P+A+AS+ QV+ AR Sbjct: 42 FWMPNRHKDKLL----------GERLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTAR 142
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_SHIF8 (Probable ubiquinone biosynthesis protein ubiB OS=Shigella flexneri serotype 5b (strain 8401) GN=ubiB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.755e-14 Identity = 42/111 (37.84%), Postives = 65/111 (58.56%), Query Frame = 3 Query: 504 WWFGSRFVDELMERSDQMFPVRAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQEL-GLPIDELFSEISPEPVAAASLGQVYQAR 833 +W +R D+L+ LR L ELGP ++K Q +S+R DL PP D+L+LLQD++ PF ++A IE + GLP++ F + +P+A+AS+ QV+ AR Sbjct: 42 FWMPNRHKDKLL----------GERLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTAR 142
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_SHIDS (Probable ubiquinone biosynthesis protein ubiB OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=ubiB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.755e-14 Identity = 42/111 (37.84%), Postives = 65/111 (58.56%), Query Frame = 3 Query: 504 WWFGSRFVDELMERSDQMFPVRAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQEL-GLPIDELFSEISPEPVAAASLGQVYQAR 833 +W +R D+L+ LR L ELGP ++K Q +S+R DL PP D+L+LLQD++ PF ++A IE + GLP++ F + +P+A+AS+ QV+ AR Sbjct: 42 FWMPNRHKDKLL----------GERLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTAR 142
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_SHIBS (Probable ubiquinone biosynthesis protein ubiB OS=Shigella boydii serotype 4 (strain Sb227) GN=ubiB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.755e-14 Identity = 42/111 (37.84%), Postives = 65/111 (58.56%), Query Frame = 3 Query: 504 WWFGSRFVDELMERSDQMFPVRAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQEL-GLPIDELFSEISPEPVAAASLGQVYQAR 833 +W +R D+L+ LR L ELGP ++K Q +S+R DL PP D+L+LLQD++ PF ++A IE + GLP++ F + +P+A+AS+ QV+ AR Sbjct: 42 FWMPNRHKDKLL----------GERLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTAR 142
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_SHIB3 (Probable ubiquinone biosynthesis protein ubiB OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=ubiB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.755e-14 Identity = 42/111 (37.84%), Postives = 65/111 (58.56%), Query Frame = 3 Query: 504 WWFGSRFVDELMERSDQMFPVRAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQEL-GLPIDELFSEISPEPVAAASLGQVYQAR 833 +W +R D+L+ LR L ELGP ++K Q +S+R DL PP D+L+LLQD++ PF ++A IE + GLP++ F + +P+A+AS+ QV+ AR Sbjct: 42 FWMPNRHKDKLL----------GERLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTAR 142
BLAST of FC899928 vs. ExPASy Swiss-Prot
Match: UBIB_SHEWM (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=ubiB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.755e-14 Identity = 40/109 (36.70%), Postives = 61/109 (55.96%), Query Frame = 3 Query: 504 WWFGSRFVDELMERSDQMFPVRAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQA 830 W+F R+ V L+ ++ ELGP Y+K Q +S+R DL+ + +EL++LQD++ PF S +A IE ELG ID F + P+A+AS+ QV+ A Sbjct: 32 WYFRLLRCTFFWLRNQHKDKVGGERLKLVMQELGPVYIKFGQMLSTRRDLLDDEWAEELAMLQDRVPPFDSSIAREMIELELGTSIDTYFDDFDNTPLASASISQVHTA 140 The following BLAST results are available for this feature:
BLAST of FC899928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 167
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Sequences
The
following sequences are available for this feature:
EST sequence >FC899928 ID=FC899928; Name=FC899928; organism=Citrus clementina; type=EST; length=835bpback to top |