FC900542
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC900542 vs. ExPASy Swiss-Prot
Match: EF1G_MOUSE (Elongation factor 1-gamma OS=Mus musculus GN=Eef1g PE=1 SV=3) HSP 1 Score: 231.491 bits (589), Expect = 3.213e-60 Identity = 105/163 (64.42%), Postives = 131/163 (80.37%), Query Frame = 3 Query: 174 ESKDPFDSMPKGTFNMDDFKRCYSNEDE-EKSIPYFWEKFDPENYSIWYGEYKYPEELSKVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSSISGVWVWRGKDLAFPLSPDWTIDYESYDWTKLDPASPDTKKMVKDYFSWSGQ-DKKGRKFNQGKIFK 656 ++KDPF +PK TF +D+FKR YSNED ++PYFWE FD + +S+WY EY++PEEL++ FMSCNLITGMFQRLDK+RK AFASV LFG +N SSISGVWV+RG++LAFPLSPDW +DYESY W KLDP S +T+ +V++YFSW G G+ NQGKIFK Sbjct: 275 KAKDPFAHLPKSTFVLDEFKRKYSNEDTLSVALPYFWEHFDKDGWSLWYAEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWEGTFQHVGKAVNQGKIFK 437
BLAST of FC900542 vs. ExPASy Swiss-Prot
Match: EF1GA_XENLA (Elongation factor 1-gamma-A OS=Xenopus laevis GN=eef1g-A PE=1 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.480e-60 Identity = 108/163 (66.26%), Postives = 131/163 (80.37%), Query Frame = 3 Query: 174 ESKDPFDSMPKGTFNMDDFKRCYSNEDE-EKSIPYFWEKFDPENYSIWYGEYKYPEELSKVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSSISGVWVWRGKDLAFPLSPDWTIDYESYDWTKLDPASPDTKKMVKDYFSWSGQDKK-GRKFNQGKIFK 656 +SKDP+ +PK +F MD+FKR YSNED ++PYFWE FD E +SIWY EYK+PEEL++ FMSCNLITGMFQRLDK+RK FASV LFG +N+SSISGVWV+RG+DLAF LS DW IDYESY+W KLD S + K +VK+YF+W G+ K G+ FNQGKIFK Sbjct: 274 KSKDPYAHLPKSSFIMDEFKRKYSNEDTLTVALPYFWEHFDKEGWSIWYAEYKFPEELTQAFMSCNLITGMFQRLDKLRKTGFASVILFGTNNNSSISGVWVFRGQDLAFTLSEDWQIDYESYNWRKLDSGSEECKTLVKEYFAWEGEFKNVGKPFNQGKIFK 436
BLAST of FC900542 vs. ExPASy Swiss-Prot
Match: EF1G_BOVIN (Elongation factor 1-gamma OS=Bos taurus GN=EEF1G PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.720e-59 Identity = 103/163 (63.19%), Postives = 130/163 (79.75%), Query Frame = 3 Query: 174 ESKDPFDSMPKGTFNMDDFKRCYSNEDE-EKSIPYFWEKFDPENYSIWYGEYKYPEELSKVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSSISGVWVWRGKDLAFPLSPDWTIDYESYDWTKLDPASPDTKKMVKDYFSWSGQ-DKKGRKFNQGKIFK 656 ++KDPF +PK TF +D+FKR YSNED ++PYFW+ FD + +S+WY EY++PEEL++ FMSCNLITGMFQRLDK+RK AFASV LFG +N SSISGVW +RG++LAFPLSPDW +DYESY W KLDP S +T+ +V++YF W G G+ FNQGKIFK Sbjct: 278 KAKDPFAHLPKSTFVLDEFKRKYSNEDTLSVALPYFWDHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWDFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFCWEGAFQHVGKAFNQGKIFK 440
BLAST of FC900542 vs. ExPASy Swiss-Prot
Match: EF1G_CARAU (Elongation factor 1-gamma OS=Carassius auratus GN=eef1g PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.763e-58 Identity = 105/163 (64.42%), Postives = 129/163 (79.14%), Query Frame = 3 Query: 174 ESKDPFDSMPKGTFNMDDFKRCYSNEDE-EKSIPYFWEKFDPENYSIWYGEYKYPEELSKVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSSISGVWVWRGKDLAFPLSPDWTIDYESYDWTKLDPASPDTKKMVKDYFSWSGQDKK-GRKFNQGKIFK 656 ++KDP+ +PK +F MD+FKR YSNED ++PYFW+ FD E +SIWY EY++PEEL+ FMSCNLITGMFQRLDK+RK AFASV LFG +NDS ISG+WV+RG++LAF LS DW IDYESY W KLD S + K MVK+YF+W G+ K G+ FNQGKIFK Sbjct: 280 KAKDPYAHLPKSSFVMDEFKRKYSNEDTLTVALPYFWDHFDREGFSIWYAEYRFPEELTMSFMSCNLITGMFQRLDKLRKNAFASVILFGANNDSCISGIWVFRGQELAFTLSEDWQIDYESYTWRKLDVDSEECKTMVKEYFAWEGEFKHVGKSFNQGKIFK 442
BLAST of FC900542 vs. ExPASy Swiss-Prot
Match: EF1GB_XENLA (Elongation factor 1-gamma-B OS=Xenopus laevis GN=eef1g-B PE=2 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.302e-58 Identity = 106/163 (65.03%), Postives = 130/163 (79.75%), Query Frame = 3 Query: 174 ESKDPFDSMPKGTFNMDDFKRCYSNEDE-EKSIPYFWEKFDPENYSIWYGEYKYPEELSKVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSSISGVWVWRGKDLAFPLSPDWTIDYESYDWTKLDPASPDTKKMVKDYFSWSGQDKK-GRKFNQGKIFK 656 +SKDP+ +PK +F MD+FKR YSNED ++PYFWE F+ E +SIWY EYK+PEEL++ FMSCNLITGMFQRLDK+RK AFASV LFG +N+S+ISGVWV+RG DLAF LS DW IDYESY W KL+ S + + MVK+YF+W G+ K G+ FNQGKIFK Sbjct: 275 KSKDPYAHLPKSSFIMDEFKRKYSNEDTLTVALPYFWEHFEKEGWSIWYAEYKFPEELTQTFMSCNLITGMFQRLDKLRKTAFASVILFGTNNNSTISGVWVFRGHDLAFTLSEDWQIDYESYTWRKLESDSEECRTMVKEYFAWEGEFKHVGKAFNQGKIFK 437
BLAST of FC900542 vs. ExPASy Swiss-Prot
Match: EF1G_SCHPO (Elongation factor 1-gamma OS=Schizosaccharomyces pombe GN=tef3 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.399e-31 Identity = 72/170 (42.35%), Postives = 109/170 (64.12%), Query Frame = 3 Query: 162 EKP-KESKDPFDSMPKGTFNMDDFKRCYSNEDEEK-SIPYFWEKFDPENYSIWYGEYKYPEELSK-VFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSSISGVWVWRGKDL--AFPLSPDWTIDYESYDWTKLDPASPDTKKMVKDYFSWSGQDKKGRKFNQGKIFK 656 E+P K K P S P G+F+++++KR YSN+D ++P+F+E FDPENYS+W +Y YPE+L + VFM+ NLI G FQRL+ RK F + G + D++I+G +V +G D AF ++PDW SY +TKLD P+ K ++D ++W + +GR+ GK+ K Sbjct: 245 ERPAKPPKHPLASAPNGSFDIEEYKRVYSNQDTRSGALPWFFEHFDPENYSVWKVDYSYPEDLKQPVFMTNNLIGGFFQRLEASRKYIFGCCVVIGENGDNTITGAFVIKGHDYVPAFDVAPDW----GSYTFTKLDINKPEDKAFIEDAWAWD-KPIEGREVADGKVCK 409
BLAST of FC900542 vs. ExPASy Swiss-Prot
Match: EF1G2_YEAST (Elongation factor 1-gamma 2 OS=Saccharomyces cerevisiae GN=TEF4 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.464e-30 Identity = 69/171 (40.35%), Postives = 105/171 (61.40%), Query Frame = 3 Query: 171 KESKDPFDSMPKGTFNMDDFKRCYSNEDEEK-SIPYFWEKFDPENYSIWYGEYKYPEELSKVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSSISGVWVWRGKDL--AFPLSPDWTIDYESYDWTKLDPASPDTKKMVKDYFSW------SGQDKKGRKFNQGKIFK 656 K+ K P +++ K TF +DD+KR YSN+D ++P+FWE ++PE YSIW YKY +EL+ FMS NL+ G F RL K F + ++G +N++ I G + RG+D AF ++PDW ESY++TKLDP + K+ V + ++W +G+DK + GK+ K Sbjct: 249 KKPKHPLEALGKSTFVLDDWKRKYSNDDTRPVALPWFWEHYNPEEYSIWKVGYKYNDELTLTFMSNNLVGGFFNRLSASTKYMFGCLVVYGENNNNGIVGAVMVRGQDFAPAFDVAPDW----ESYEYTKLDPTKEEDKEFVNNMWAWDKPVVVNGEDK---EIVDGKVLK 412
BLAST of FC900542 vs. ExPASy Swiss-Prot
Match: EF1G1_YEAST (Elongation factor 1-gamma 1 OS=Saccharomyces cerevisiae GN=CAM1 PE=1 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.008e-29 Identity = 66/168 (39.29%), Postives = 102/168 (60.71%), Query Frame = 3 Query: 171 KESKDPFDSMPKGTFNMDDFKRCYSNEDEEK-SIPYFWEKFDPENYSIWYGEYKYPEELSKVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSSISGVWVWRGKDL--AFPLSPDWTIDYESYDWTKLDPASPDTKKMVKDYFSWS---GQDKKGRKFNQGKIFK 656 K+ K P + + K TF +DD+KR YSNED ++P+FWE ++PE YS+W YKY +EL+ FMS NL+ G F RL K F + ++G +N++ I G + RG+D AF ++PDW ESYD+ KLDP + D K+ + + ++W + + ++ GK+ K Sbjct: 252 KKPKHPLELLGKSTFVLDDWKRKYSNEDTRPVALPWFWEHYNPEEYSLWKVTYKYNDELTLTFMSNNLVGGFFNRLSASTKYMFGCLVVYGENNNNGIVGAVMVRGQDYVPAFDVAPDW----ESYDYAKLDPTNDDDKEFINNMWAWDKPVSVNGEPKEIVDGKVLK 415
BLAST of FC900542 vs. ExPASy Swiss-Prot
Match: EF1G_PRUAV (Elongation factor 1-gamma OS=Prunus avium PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.841e-24 Identity = 58/171 (33.92%), Postives = 94/171 (54.97%), Query Frame = 3 Query: 156 IDEKPK-ESKDPFDSMPKGTFNMDDFKRCYSNED---EEKSIPYFWEKFDPENYSIWYGEYKYPEELSKVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSSISGVWVWRGKDLAFPLSPDWTIDYESYDWTKLDPASPDTKKMVKDYFSWSGQDKKGRKFNQGKIFK 656 ++E PK + K+P D +P +DD+KR YSN E +I FW+ +DPE YS+W+ EYKY +E + F++ N + G QR+D RK AF + + G + + G+W++RG+++ P + D E Y+WTK+D + + K+ V + +G K FK Sbjct: 254 VEEAPKPKPKNPLDLLPPSNMVLDDWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCEYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIP-PFVMEECYDMELYNWTKVDLSDENQKERVNQVIE-DQEPFEGEALLDAKCFK 422
BLAST of FC900542 vs. ExPASy Swiss-Prot
Match: EF1G3_ORYSJ (Elongation factor 1-gamma 3 OS=Oryza sativa subsp. japonica GN=Os06g0571400 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.102e-23 Identity = 56/161 (34.78%), Postives = 91/161 (56.52%), Query Frame = 3 Query: 159 DEKPK-ESKDPFDSMPKGTFNMDDFKRCYSNED---EEKSIPYFWEKFDPENYSIWYGEYKYPEELSKVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSSISGVWVWRGKDLAFPLSPDWTIDYESYDWTKLDPASPDTKK----MVKDYFSWSGQD 617 +E PK + K+P D +P +D++KR YSN E +I FW+ +DPE YS+W+ +YKY +E + F++ N + G QR+D RK AF + + G + G+W++RG+D+ D D E Y+WTK+D + K+ M++D + G+D Sbjct: 249 EEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREIAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKMLVIGSTPPFKVKGLWLFRGQDIP-KFVMDEVYDMELYEWTKVDLSDEAQKERVNAMIEDQEPFEGED 408 The following BLAST results are available for this feature:
BLAST of FC900542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >FC900542 ID=FC900542; Name=FC900542; organism=Citrus clementina; type=EST; length=683bpback to top |