FC900544

Overview
NameFC900544
Unique NameFC900544
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length799
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13309 contig Ccv1_Contig13309:63..861. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC900544 vs. ExPASy Swiss-Prot
Match: FBXW7_DROME (F-box/WD repeat-containing protein 7 OS=Drosophila melanogaster GN=ago PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.531e-22
Identity = 56/163 (34.36%), Postives = 95/163 (58.28%), Query Frame = 3
Query:  309 LQKFTGHEQGVSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 797
            L+   GH  GV     S +   ++S S D+T+++WD+ +  C+ TL GHT+ V C++ +   + +VSG+ D T+R+WD++ G CL VL  H   V  V +  DG +IV+ +YD + +IW      C+ TL    N   S ++F  +G  ++ G+LD ++R+W+
Sbjct: 1028 LRTLVGHTGGVWSSQMSGN--IIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLH--GSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQY--DGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYS-LQF--DGLHVVSGSLDTSIRVWD 1181          

HSP 2 Score: 98.9821 bits (245), Expect = 3.247e-20
Identity = 63/181 (34.81%), Postives = 90/181 (49.72%), Query Frame = 3
Query:  168 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPA---HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI 701
            L GHL A+  V++  DG+L+ S + D                     L    GH   V  L F  D   +VS S D +IR+WDV T  C  TL+GH +    +    + N++VSG  D TV++WD+ TG+CL+ L     H   VT + FN     +VTSS DG  ++WD  TG  ++ L+
Sbjct: 1111 LVGHLAAVRCVQY--DGKLIVSGAYD--------YMVKIWHPERQECLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMEL--RQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFN--SRFVVTSSDDGTVKLWDVKTGDFIRNLV 1275          

HSP 3 Score: 96.6709 bits (239), Expect = 1.611e-19
Identity = 51/158 (32.28%), Postives = 87/158 (55.06%), Query Frame = 3
Query:  324 GHEQGVSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 797
            GH+  V      S +R +VS SDD T+++W      CL+TL+GHT  V+    +   N+I+SG+ D T+++WD+ +G C+  L  H+  V  +  +  G+ +V+ S D   R+WD   G C+  L+      V  V++  +GK I+ G  D  +++W+
Sbjct:  992 GHDDHVITCLQFSGNR-IVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMS--GNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLH--GSKVVSGSRDATLRVWDIEQGSCLHVLV-GHLAAVRCVQY--DGKLIVSGAYDYMVKIWH 1141          

HSP 4 Score: 96.6709 bits (239), Expect = 1.611e-19
Identity = 63/212 (29.72%), Postives = 104/212 (49.06%), Query Frame = 3
Query:  162 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 797
            +TL GH   + S + S  G ++ S S D+                    +    GH   V  +        +VS S D T+R+WD+   +CL  L+GH   V CV ++    +IVSGA+D  V+IW  +  +CL  L  H++ V ++ F  DG  +V+ S D   R+WD  TG+C  TL+  ++   S ++   N   ++ G  D+T+++W+
Sbjct: 1029 RTLVGHTGGVWSSQMS--GNIIISGSTDRTLKVWDMDSGAC--------VHTLQGHTSTVRCMHLHGSK--VVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYD--GKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQS-LTSGMELRQN--ILVSGNADSTVKVWD 1221          
BLAST of FC900544 vs. ExPASy Swiss-Prot
Match: WDR38_MOUSE (WD repeat-containing protein 38 OS=Mus musculus GN=Wdr38 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.917e-22
Identity = 63/208 (30.29%), Postives = 99/208 (47.60%), Query Frame = 3
Query:  177 HLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD--ASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 794
            H   ++   FS DGR L ++S D                     L +  GH   V    FS D R + S+S D +IRLWDV  + CL  L GH   V  V+F+P S  + SG +D+   +W+V++G+ + +L  H D + + DF+     + T S+D    IWD  AST       ++     +S + +S +G  +  G+ D T+ +W
Sbjct:   25 HHGEVNCSAFSPDGRTLLTASDD--------GCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASG-LLASGSWDKTICVW 223          

HSP 2 Score: 86.6557 bits (213), Expect = 1.668e-16
Identity = 56/206 (27.18%), Postives = 98/206 (47.57%), Query Frame = 3
Query:  168 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKT---LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL---IDDENPPVSFVKFSPNGKFILVG 767
            L GH R++ +V FS D + LAS   DK                    +    GH   +    FS  S  L + S D T+ +WD+  +T + +   L GHT  + C+ ++  S ++ SG++D+T+ +W   T      L  H+  V ++ F+ D   + ++ Y    ++WD  TG C++TL   +D  +  +    F+P+GK ++ G
Sbjct:  106 LKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRR--------VHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSA-SGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACI----FTPDGKLLVSG 298          

HSP 3 Score: 85.5001 bits (210), Expect = 3.715e-16
Identity = 55/213 (25.82%), Postives = 102/213 (47.89%), Query Frame = 3
Query:  168 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGK---CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 797
            L GH   + S  FS DGRL+ASSS+D                     L    GH++ V  ++FS DS+ L S   DK   +W+V +   +  L+GH + +   +F+P S+ + +G++D TV IWD++          L  H+  ++ + ++  G ++ + S+D    +W  +T + +   +      V+ + FSP+   +       T+++W+
Sbjct:   64 LAGHRGPVKSCCFSPDGRLIASSSSD--------HSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASG-LLASGSWDKTICVWKPTTNN-LPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWD 266          

HSP 4 Score: 70.4774 bits (171), Expect = 1.237e-11
Identity = 50/158 (31.65%), Postives = 68/158 (43.04%), Query Frame = 3
Query:  168 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSS 641
            L GH  +I S  FS     LA+ S D                          GH   +S L +S+ S  L S S DKTI +W   T      L GHT +V  + F+P    + S  +  TV++WD  TGKCL+ L    D   A  F  DG ++V+ +
Sbjct:  148 LVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSY-----HNLEGHTGNISCLCYSA-SGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVSGA 299          
BLAST of FC900544 vs. ExPASy Swiss-Prot
Match: TAF5_SCHPO (Transcription initiation factor TFIID subunit 5 OS=Schizosaccharomyces pombe GN=taf5 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.917e-22
Identity = 64/210 (30.48%), Postives = 96/210 (45.71%), Query Frame = 3
Query:  168 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 797
            L  H   +    FS D + L S S D                     L  + GH   V D+AF     +  +AS D+T +LW       L+   GH + V CV F+P S  +++G+ D+T R+WDV  G  ++V   H+ PVTAV    DG  + ++  +GL  +WD  TG  +KT+        S + FS     ++ G  D T+R W+
Sbjct:  375 LLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTA--------LVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYS-LSFSRESTVLVSGGSDCTVRAWD 575          

HSP 2 Score: 94.7449 bits (234), Expect = 6.124e-19
Identity = 48/161 (29.81%), Postives = 79/161 (49.07%), Query Frame = 3
Query:  315 KFTGHEQGVSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 797
            +   H   V    FS D+++L+S S+D + RLW V T T L    GHT  V+ V F P  +   + + D+T ++W       L+V   H   V  V F+ +   ++T S D  CR+WD   GH ++ + +    PV+ V  +P+G  +     +  + LW+
Sbjct:  374 RLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVR-VFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWD 533          

HSP 3 Score: 73.559 bits (179), Expect = 1.461e-12
Identity = 44/161 (27.33%), Postives = 73/161 (45.34%), Query Frame = 3
Query:  354 FSSDSRFLVSASDDKTIRLWDV-------PTATCLK------TLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 797
            FS DS  +     +  IRLW +       P +T ++       L+ H+  V+   F+P +  ++S + D + R+W V T   L     H+ PV  V F   G    T+S+D   ++W     + ++      +  V  V F PN  ++L G+ D T RLW+
Sbjct:  332 FSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLS-DVDCVTFHPNSAYVLTGSSDKTCRLWD 491          

HSP 4 Score: 69.707 bits (169), Expect = 2.110e-11
Identity = 38/124 (30.65%), Postives = 61/124 (49.19%), Query Frame = 3
Query:  174 GHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDV 545
            GHL  +  V F  +   + + S+DK                    ++ F GH Q V+ +A + D   + SA  +  I LWD+ T   +KT+ GH   ++ ++F+ +S ++VSG  D TVR WDV
Sbjct:  461 GHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHS--------VRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDV 576          
BLAST of FC900544 vs. ExPASy Swiss-Prot
Match: WSB2_MOUSE (WD repeat and SOCS box-containing protein 2 OS=Mus musculus GN=Wsb2 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.009e-21
Identity = 58/175 (33.14%), Postives = 99/175 (56.57%), Query Frame = 3
Query:  309 LQKFTGHEQGVSDLAFS-SDSRFLVSASDDKTIRLWDVPT-ATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL--------IDDENPPVSFVK---FSPNGKFILVGTLDNTLRLW 794
            L   +GH+  V DL+F+ S S  LVSAS DKT+R+WD+      ++ L GH  +V+C + +P  +M+ S A +++V +W +++   ++ L  H   V + DF+ D  ++VT+SYD    +WD  TG  +++L        +DD +  +S ++   FSP G ++     D  LR+W
Sbjct:  146 LLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTSVIMWDPYTGARLRSLHHTQLEPTMDDSDVHMSSLRSVCFSPEGLYLATVADDRLLRIW 320          
BLAST of FC900544 vs. ExPASy Swiss-Prot
Match: TUP11_SCHPO (Transcriptional repressor tup11 OS=Schizosaccharomyces pombe GN=tup11 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.009e-21
Identity = 66/221 (29.86%), Postives = 108/221 (48.87%), Query Frame = 3
Query:  156 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQG--------VSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 794
            L  TL  H   +  VKFS++G+ LA+                          + FT HE+         V  +AFS D ++LV+ ++D+ I+LWD+ T        GH   ++ ++F+     IVSG+ D T R+WDV+TG+C+  L   +  VTA+  + +   I   S D + R+W  S G  ++ L +     V  + FSP+   +L G+LD T+++W
Sbjct:  306 LVHTLE-HPSVVCCVKFSNNGKYLATGCNQAANVFDVQTGK-----------KLFTLHEESPDPSRDLYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENG-VTAIAISPNDQFIAVGSLDQIIRVWSVS-GTLVERL-EGHKESVYSIAFSPDSSILLSGSLDKTIKVW 511          

HSP 2 Score: 97.4413 bits (241), Expect = 9.447e-20
Identity = 62/221 (28.05%), Postives = 106/221 (47.96%), Query Frame = 3
Query:  171 NGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKT------------GKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 797
            +GH + I S+ FSH+GR + S S D+                           E GV+ +A S + +F+   S D+ IR+W V + T ++ L GH   V+ + F+P S++++SG+ D+T+++W+++             G C      H+D V +V  + D    ++ S D   + WD  TG    T    +N  +S V FSP+G+    G+ D   R+W+
Sbjct:  399 SGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEI---------ENGVTAIAISPNDQFIAVGSLDQIIRVWSV-SGTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVIS-VCFSPDGRQFASGSGDLRARIWS 608          
BLAST of FC900544 vs. ExPASy Swiss-Prot
Match: TAF5L_MOUSE (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.009e-21
Identity = 60/215 (27.91%), Postives = 99/215 (46.05%), Query Frame = 3
Query:  153 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 797
            T  + L GH   + S +F  D   L S S D                        + GH   V D+  S  S +  S S D+T RLW       L+   GH   V CV F+P SN + +G+ D+TVR+W  + G  +++   H  PV ++ F+ +G  + ++  D   ++WD ++G   K L       ++ + FSP+   I   ++DN++R+W+
Sbjct:  333 TEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVL--------YQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKEL-RGHTDSITSLAFSPDSGLIASASMDNSVRVWD 538          

HSP 2 Score: 88.1965 bits (217), Expect = 5.732e-17
Identity = 48/179 (26.82%), Postives = 80/179 (44.69%), Query Frame = 3
Query:  150 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 686
            +T T    GH   +  V  S      AS S D+                    L+ + GH   V  + F  +S +L + S DKT+RLW       ++   GH   V  ++F+P    + S   D+ +++WD+ +G   K L  H+D +T++ F+ D  +I ++S D   R+WD  +  C
Sbjct:  374 FTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYP--------LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCC 544          
BLAST of FC900544 vs. ExPASy Swiss-Prot
Match: GBLP_LEIIN (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania infantum PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.009e-21
Identity = 67/223 (30.04%), Postives = 110/223 (49.33%), Query Frame = 3
Query:  114 MSSDQSLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI--GHTNYVFCVNFNP--QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT 770
            + SD  L S R       L GH   +S V  +H      ++S D+                     +KF  H + V  +AFS D R +VSA  D  IR+W+V    C+   +  GH ++V  + F+P  +  ++VSG++D T+++W+V  GKC + L  HS+ V+ V  + DG++  +   DG   +WD STG  +  +  +   P++ + FSPN  ++ V T
Sbjct:   50 VDSDYGLPSHR-------LEGHTGFVSCVSLAHATDYALTASWDRSIRMWDLRNGQCQ--------RKFLKHTKDVLAVAFSPDDRLIVSAGRDNVIRVWNV-AGECMHEFLRDGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGEQLFKI--NVESPINQIAFSPNRFWMCVAT 254          

HSP 2 Score: 90.1225 bits (222), Expect = 1.508e-17
Identity = 50/165 (30.30%), Postives = 88/165 (53.33%), Query Frame = 3
Query:  315 KFTGHEQGVSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLK--VLPAHSDPVTAVDFNR--DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 797
            +  GH   VS ++ +  + + ++AS D++IR+WD+    C +  + HT  V  V F+P   +IVS   D  +R+W+V  G+C+   +   H D V+++ F+   +  ++V+ S+D   ++W+ + G C +TL    N  VS V  SP+G     G  D    LW+
Sbjct:   60 RLEGHTGFVSCVSLAHATDYALTASWDRSIRMWDLRNGQCQRKFLKHTKDVLAVAFSPDDRLIVSAGRDNVIRVWNV-AGECMHEFLRDGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNY-VSTVTVSPDGSLCASGGKDGAALLWD 222          

HSP 3 Score: 80.8777 bits (198), Expect = 9.151e-15
Identity = 51/173 (29.48%), Postives = 88/173 (50.87%), Query Frame = 3
Query:  324 GHEQGVSDLAFSSDSRF---LVSASDDKTIRLW---------DVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPP-VSFVKFSPN--GKFILVGTLDNTLRLWN 797
            GH   V+ LA    +     +VS S D T   W         D         L GHT +V CV+    ++  ++ ++D ++R+WD++ G+C +    H+  V AV F+ D  +IV++  D + R+W+ + G CM   + D +   VS + FSP+     ++ G+ DNT+++WN
Sbjct:    9 GHRGWVTSLACPQQAGSYIKVVSTSRDGTAISWKANPDRHSVDSDYGLPSHRLEGHTGFVSCVSLAHATDYALTASWDRSIRMWDLRNGQCQRKFLKHTKDVLAVAFSPDDRLIVSAGRDNVIRVWNVA-GECMHEFLRDGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWN 180          
BLAST of FC900544 vs. ExPASy Swiss-Prot
Match: GBLP_LEICH (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania chagasi PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.009e-21
Identity = 67/223 (30.04%), Postives = 110/223 (49.33%), Query Frame = 3
Query:  114 MSSDQSLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI--GHTNYVFCVNFNP--QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT 770
            + SD  L S R       L GH   +S V  +H      ++S D+                     +KF  H + V  +AFS D R +VSA  D  IR+W+V    C+   +  GH ++V  + F+P  +  ++VSG++D T+++W+V  GKC + L  HS+ V+ V  + DG++  +   DG   +WD STG  +  +  +   P++ + FSPN  ++ V T
Sbjct:   50 VDSDYGLPSHR-------LEGHTGFVSCVSLAHATDYALTASWDRSIRMWDLRNGQCQ--------RKFLKHTKDVLAVAFSPDDRLIVSAGRDNVIRVWNV-AGECMHEFLRDGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGEQLFKI--NVESPINQIAFSPNRFWMCVAT 254          

HSP 2 Score: 90.1225 bits (222), Expect = 1.508e-17
Identity = 50/165 (30.30%), Postives = 88/165 (53.33%), Query Frame = 3
Query:  315 KFTGHEQGVSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLK--VLPAHSDPVTAVDFNR--DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 797
            +  GH   VS ++ +  + + ++AS D++IR+WD+    C +  + HT  V  V F+P   +IVS   D  +R+W+V  G+C+   +   H D V+++ F+   +  ++V+ S+D   ++W+ + G C +TL    N  VS V  SP+G     G  D    LW+
Sbjct:   60 RLEGHTGFVSCVSLAHATDYALTASWDRSIRMWDLRNGQCQRKFLKHTKDVLAVAFSPDDRLIVSAGRDNVIRVWNV-AGECMHEFLRDGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNY-VSTVTVSPDGSLCASGGKDGAALLWD 222          

HSP 3 Score: 80.8777 bits (198), Expect = 9.151e-15
Identity = 51/173 (29.48%), Postives = 88/173 (50.87%), Query Frame = 3
Query:  324 GHEQGVSDLAFSSDSRF---LVSASDDKTIRLW---------DVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPP-VSFVKFSPN--GKFILVGTLDNTLRLWN 797
            GH   V+ LA    +     +VS S D T   W         D         L GHT +V CV+    ++  ++ ++D ++R+WD++ G+C +    H+  V AV F+ D  +IV++  D + R+W+ + G CM   + D +   VS + FSP+     ++ G+ DNT+++WN
Sbjct:    9 GHRGWVTSLACPQQAGSYIKVVSTSRDGTAISWKANPDRHSVDSDYGLPSHRLEGHTGFVSCVSLAHATDYALTASWDRSIRMWDLRNGQCQRKFLKHTKDVLAVAFSPDDRLIVSAGRDNVIRVWNVA-GECMHEFLRDGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWN 180          
BLAST of FC900544 vs. ExPASy Swiss-Prot
Match: TAF5L_HUMAN (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.318e-21
Identity = 61/215 (28.37%), Postives = 99/215 (46.05%), Query Frame = 3
Query:  153 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 797
            T  + L GH   + S +F  D   L S S D                        + GH   V DL  S  S +  S S D+T RLW       L+   GH   V CV F+P SN + +G+ D+TVR+W  + G  +++   H  PV ++ F+ +G  + ++  D   ++WD ++G   K L       ++ + FSP+   I   ++DN++R+W+
Sbjct:  333 TEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVL--------YQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKEL-RGHTDNITSLTFSPDSGLIASASMDNSVRVWD 538          

HSP 2 Score: 87.4261 bits (215), Expect = 9.777e-17
Identity = 38/126 (30.16%), Postives = 66/126 (52.38%), Query Frame = 3
Query:  309 LQKFTGHEQGVSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 686
            L+ + GH   V  + F  +S +L + S DKT+RLW       ++   GH   V  + F+P    + S   D+ +++WD+ +G   K L  H+D +T++ F+ D  +I ++S D   R+WD    +C
Sbjct:  419 LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYC 544          
BLAST of FC900544 vs. ExPASy Swiss-Prot
Match: RCO1_NEUCR (Transcriptional repressor rco-1 OS=Neurospora crassa GN=rco-1 PE=4 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.318e-21
Identity = 68/233 (29.18%), Postives = 108/233 (46.35%), Query Frame = 3
Query:  153 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLAFSSDSRFLVSASDDKTIRLWDVP--TATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDV------------KTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVK---FSPNG-KFILVGTLDNTLRLWN 797
            T+  T +GH + I S+ FS DGR +AS S D+                           E GV+ +A S D +F+ + S DK++R+WD+    A  L+   GH + V+ V F+P    +VSG+ D+T+++W++            K G+C+K    H D V +V    D   +++ S D   + WD  TGH    L   +N  +S        PNG  +   G+ D   R+W+
Sbjct:  377 TIRNTFHGHEQDIYSLDFSRDGRTIASGSGDRTVRLWDIETGQNTSVLSI---------EDGVTTVAISPDKQFVAAGSLDKSVRVWDMRGYLAERLEGPDGHKDSVYSVAFSPDGRNLVSGSLDKTIKMWELSAPRGIPSSAPPKGGRCIKTFEGHRDFVLSVALTPDSQWVLSGSKDRGVQFWDPRTGHTQLMLQGHKNSVISVAPSPVTGPNGVGYFATGSGDMRARIWS 600          

HSP 2 Score: 100.908 bits (250), Expect = 8.545e-21
Identity = 52/154 (33.77%), Postives = 86/154 (55.84%), Query Frame = 3
Query:  339 VSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL--IDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 794
            +  + FS D ++L + ++DK IR+WD+ + T   T  GH   ++ ++F+     I SG+ D TVR+WD++TG+   VL +  D VT V  + D   +   S D   R+WD   G+  + L   D     V  V FSP+G+ ++ G+LD T+++W
Sbjct:  347 IRSVCFSPDGKYLATGAEDKLIRVWDIQSRTIRNTFHGHEQDIYSLDFSRDGRTIASGSGDRTVRLWDIETGQNTSVL-SIEDGVTTVAISPDKQFVAAGSLDKSVRVWD-MRGYLAERLEGPDGHKDSVYSVAFSPDGRNLVSGSLDKTIKMW 498          

HSP 3 Score: 96.6709 bits (239), Expect = 1.611e-19
Identity = 63/217 (29.03%), Postives = 104/217 (47.93%), Query Frame = 3
Query:  189 ISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK--TGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST------------GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 797
            I SV FS DG+ LA+ + DK                       F GHEQ +  L FS D R + S S D+T+RLWD+ T     +++   + V  V  +P    + +G+ D++VR+WD++    + L+    H D V +V F+ DG  +V+ S D   ++W+ S             G C+KT  +     V  V  +P+ +++L G+ D  ++ W+
Sbjct:  347 IRSVCFSPDGKYLATGAEDKLIRVWDIQSRTIR--------NTFHGHEQDIYSLDFSRDGRTIASGSGDRTVRLWDIETGQ-NTSVLSIEDGVTTVAISPDKQFVAAGSLDKSVRVWDMRGYLAERLEGPDGHKDSVYSVAFSPDGRNLVSGSLDKTIKMWELSAPRGIPSSAPPKGGRCIKT-FEGHRDFVLSVALTPDSQWVLSGSKDRGVQFWD 553          

HSP 4 Score: 84.7297 bits (208), Expect = 6.337e-16
Identity = 47/163 (28.83%), Postives = 85/163 (52.15%), Query Frame = 3
Query:  327 HEQGVSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKTL------IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 797
            HE  V  + FS D ++ V+   +++ +++DV T   L  L      +    Y+  V F+P    + +GA D+ +R+WD+++         H   + ++DF+RDG  I + S D   R+WD  TG     L  ++   V+ V  SP+ +F+  G+LD ++R+W+
Sbjct:  296 HESVVCCVRFSMDGKY-VATGCNRSAQIYDVETGEKLCILQDENIDLTGDLYIRSVCFSPDGKYLATGAEDKLIRVWDIQSRTIRNTFHGHEQDIYSLDFSRDGRTIASGSGDRTVRLWDIETGQNTSVLSIEDG--VTTVAISPDKQFVAAGSLDKSVRVWD 455          

HSP 5 Score: 75.485 bits (184), Expect = 3.845e-13
Identity = 55/179 (30.73%), Postives = 82/179 (45.81%), Query Frame = 3
Query:  189 ISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLAFSSDSRFLVSASDDKTIRLWD------VPTAT------CLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVD----FNRDGT-MIVTSSYDGLCRIWDAS 674
            +++V  S D + +A+ S DK                    L+   GH+  V  +AFS D R LVS S DKTI++W+      +P++       C+KT  GH ++V  V   P S  ++SG+ D  V+ WD +TG    +L  H + V +V        +G     T S D   RIW  S
Sbjct:  430 VTTVAISPDKQFVAAGSLDKSVRVWDMRGYLAER------LEGPDGHKDSVYSVAFSPDGRNLVSGSLDKTIKMWELSAPRGIPSSAPPKGGRCIKTFEGHRDFVLSVALTPDSQWVLSGSKDRGVQFWDPRTGHTQLMLQGHKNSVISVAPSPVTGPNGVGYFATGSGDMRARIWSYS 602          
The following BLAST results are available for this feature:
BLAST of FC900544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FBXW7_DROME4.531e-2234.36F-box/WD repeat-containing protein 7 OS=Drosophila... [more]
WDR38_MOUSE5.917e-2230.29WD repeat-containing protein 38 OS=Mus musculus GN... [more]
TAF5_SCHPO5.917e-2230.48Transcription initiation factor TFIID subunit 5 OS... [more]
WSB2_MOUSE1.009e-2133.14WD repeat and SOCS box-containing protein 2 OS=Mus... [more]
TUP11_SCHPO1.009e-2129.86Transcriptional repressor tup11 OS=Schizosaccharom... [more]
TAF5L_MOUSE1.009e-2127.91TAF5-like RNA polymerase II p300/CBP-associated fa... [more]
GBLP_LEIIN1.009e-2130.04Guanine nucleotide-binding protein subunit beta-li... [more]
GBLP_LEICH1.009e-2130.04Guanine nucleotide-binding protein subunit beta-li... [more]
TAF5L_HUMAN1.318e-2128.37TAF5-like RNA polymerase II p300/CBP-associated fa... [more]
RCO1_NEUCR1.318e-2129.18Transcriptional repressor rco-1 OS=Neurospora cras... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA28DE04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA28DE04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC900544 ID=FC900544; Name=FC900544; organism=Citrus clementina; type=EST; length=799bp
ACATAATGCAATCTGCCGCTGCCGCGTGCTTTCTCAGCCATTGTCATTAT
TGTCTCTGGAGAATCCTTTCAGCCCCAAAACCCCCCGTTAAATTAAATTG
AAAAAAAAAAAAAATGTCATCAGACCAATCGTTAGAATCCTTCAGGCCTT
ACACCTTAACCCAAACCCTAAACGGCCACCTACGCGCCATCTCCTCTGTC
AAATTCTCCCACGATGGCCGCCTCCTTGCCTCTTCCTCCGCCGACAAAAC
CCTCCTCACCTATTCGCTCTCCAGTATTTCTAATTCCGATTCTACCCCTC
CCTCTCCTCTCCAAAAATTCACCGGCCACGAACAAGGCGTCTCCGACCTC
GCCTTCTCCTCCGACTCCCGCTTCCTCGTCTCAGCCTCCGACGACAAAAC
CATCCGTCTATGGGACGTCCCCACCGCCACCTGTCTCAAAACCCTAATCG
GCCACACAAATTACGTCTTCTGTGTCAACTTCAACCCTCAATCCAATATG
ATCGTCTCTGGCGCTTTTGACGAGACTGTCAGGATTTGGGACGTTAAGAC
CGGAAAATGTCTCAAGGTTTTGCCTGCCCACTCAGATCCTGTCACCGCCG
TTGACTTTAATCGCGACGGCACCATGATTGTCACTAGCAGTTATGATGGA
CTCTGTAGGATTTGGGATGCCAGCACCGGACATTGTATGAAAACGCTTAT
TGATGATGAAAATCCTCCAGTTTCCTTTGTTAAGTTTTCGCCAAATGGAA
AGTTTATTCTTGTTGGAACTCTCGATAATACTTTGAGACTTTGGAACTA
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