FC910031
|
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC910031 vs. ExPASy Swiss-Prot
Match: NDUS7_PONAB (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Pongo abelii GN=NDUFS7 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.470e-50 Identity = 56/77 (72.73%), Postives = 68/77 (88.31%), Query Frame = 3
Query: 291 SKTAEFVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPA 521
S E+V++KLDD++N+ RR S+WPM+FGLACCAVEMMH A RYD+DRFG++FR SPRQSDVM+VAGTLTNKMAPA
Sbjct: 57 SSRGEYVVAKLDDLINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQSDVMIVAGTLTNKMAPA 133 HSP 2 Score: 92.0485 bits (227), Expect = 1.470e-50 Identity = 44/67 (65.67%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 523 LRKVYDQMPNPRWVIXXXXXXXXXXXXXXXXXVVRGCDRIVPVDIYVPGCPPTAEAPLYGILQLQKK 723
LRKVYDQMP PR+V+ VVRGCDRIVPVDIY+PGCPPTAEA LYGILQLQ+K
Sbjct: 134 LRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRK 200
BLAST of FC910031 vs. ExPASy Swiss-Prot
Match: NDUS7_MOUSE (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Mus musculus GN=Ndufs7 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.915e-50 Identity = 55/74 (74.32%), Postives = 68/74 (91.89%), Query Frame = 3
Query: 300 AEFVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPA 521
AE+V++KLDD++N+ RR S+WPM+FGLACCAVEMMH A RYD+DRFG++FR SPRQ+DVM+VAGTLTNKMAPA
Sbjct: 71 AEYVVTKLDDLINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQADVMIVAGTLTNKMAPA 144 HSP 2 Score: 92.4337 bits (228), Expect = 1.915e-50 Identity = 45/67 (67.16%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 523 LRKVYDQMPNPRWVIXXXXXXXXXXXXXXXXXVVRGCDRIVPVDIYVPGCPPTAEAPLYGILQLQKK 723
LRKVYDQMP PR+V+ VVRGCDRIVPVDIYVPGCPPTAEA LYGILQLQ+K
Sbjct: 145 LRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRK 211
BLAST of FC910031 vs. ExPASy Swiss-Prot
Match: NUOB2_ACIF5 (NADH-quinone oxidoreductase subunit B 2 OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=nuoB2 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.512e-50 Identity = 58/72 (80.56%), Postives = 65/72 (90.28%), Query Frame = 3
Query: 306 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPA 521
FV + +D VVN+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFGI+FRPSPRQSDVM+VAGTL NKMAPA
Sbjct: 11 FVTTTIDTVVNWGRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGIVFRPSPRQSDVMIVAGTLVNKMAPA 82 HSP 2 Score: 93.2041 bits (230), Expect = 2.512e-50 Identity = 43/67 (64.18%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 523 LRKVYDQMPNPRWVIXXXXXXXXXXXXXXXXXVVRGCDRIVPVDIYVPGCPPTAEAPLYGILQLQKK 723
LRKVYDQMP PRWV+ +VRGCDRIVPVDIYVPGCPPTAEA L+G++QLQKK
Sbjct: 83 LRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSIVRGCDRIVPVDIYVPGCPPTAEALLFGLVQLQKK 149
BLAST of FC910031 vs. ExPASy Swiss-Prot
Match: NUOB_ACIF2 (NADH-quinone oxidoreductase subunit B OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=nuoB PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 5.564e-50 Identity = 56/72 (77.78%), Postives = 65/72 (90.28%), Query Frame = 3
Query: 306 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPA 521
FV + +D VVN+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSD+M+VAGTL NKMAPA
Sbjct: 11 FVTTSIDTVVNWSRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGLLFRPSPRQSDLMIVAGTLVNKMAPA 82 HSP 2 Score: 93.2041 bits (230), Expect = 5.564e-50 Identity = 43/67 (64.18%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 523 LRKVYDQMPNPRWVIXXXXXXXXXXXXXXXXXVVRGCDRIVPVDIYVPGCPPTAEAPLYGILQLQKK 723
LRKVYDQMP PRWV+ VVRGCDRIVPVDIYVPGCPPTAEA ++G++QLQKK
Sbjct: 83 LRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIFGLIQLQKK 149
BLAST of FC910031 vs. ExPASy Swiss-Prot
Match: NUOB1_ACIF5 (NADH-quinone oxidoreductase subunit B 1 OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=nuoB1 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 5.564e-50 Identity = 56/72 (77.78%), Postives = 65/72 (90.28%), Query Frame = 3
Query: 306 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPA 521
FV + +D VVN+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSD+M+VAGTL NKMAPA
Sbjct: 11 FVTTSIDTVVNWSRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGLLFRPSPRQSDLMIVAGTLVNKMAPA 82 HSP 2 Score: 93.2041 bits (230), Expect = 5.564e-50 Identity = 43/67 (64.18%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 523 LRKVYDQMPNPRWVIXXXXXXXXXXXXXXXXXVVRGCDRIVPVDIYVPGCPPTAEAPLYGILQLQKK 723
LRKVYDQMP PRWV+ VVRGCDRIVPVDIYVPGCPPTAEA ++G++QLQKK
Sbjct: 83 LRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIFGLIQLQKK 149
BLAST of FC910031 vs. ExPASy Swiss-Prot
Match: NUOB_THIDA (NADH-quinone oxidoreductase subunit B OS=Thiobacillus denitrificans (strain ATCC 25259) GN=nuoB PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.094e-49 Identity = 56/72 (77.78%), Postives = 65/72 (90.28%), Query Frame = 3
Query: 306 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPA 521
FV +K D ++NY+R GS+WPM+FGLACCAVEMM GA+RYDLDRFGI+FRPSPRQSDVM+VAGTL NKMAPA
Sbjct: 11 FVTTKADQLINYMRTGSMWPMTFGLACCAVEMMQAGASRYDLDRFGIVFRPSPRQSDVMIVAGTLCNKMAPA 82 HSP 2 Score: 91.2781 bits (225), Expect = 2.094e-49 Identity = 44/67 (65.67%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 523 LRKVYDQMPNPRWVIXXXXXXXXXXXXXXXXXVVRGCDRIVPVDIYVPGCPPTAEAPLYGILQLQKK 723
LRKVYDQM PRWVI VVRGCDRIVPVDIYVPGCPPTAEA ++GI+QLQKK
Sbjct: 83 LRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIFGIIQLQKK 149
BLAST of FC910031 vs. ExPASy Swiss-Prot
Match: NUOB_POLSQ (NADH-quinone oxidoreductase subunit B OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=nuoB PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.094e-49 Identity = 53/72 (73.61%), Postives = 64/72 (88.89%), Query Frame = 3
Query: 306 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPA 521
FV + D ++N+ R GS+WPM+FGLACCAVEMMH GA+RYDLDRFG++FRPSPRQSD+M+VAGTL NKMAPA
Sbjct: 11 FVTTTADQLINWTRNGSLWPMTFGLACCAVEMMHAGASRYDLDRFGVVFRPSPRQSDLMIVAGTLCNKMAPA 82 HSP 2 Score: 93.9745 bits (232), Expect = 2.094e-49 Identity = 45/67 (67.16%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 523 LRKVYDQMPNPRWVIXXXXXXXXXXXXXXXXXVVRGCDRIVPVDIYVPGCPPTAEAPLYGILQLQKK 723
LRKVYDQMP PRWVI VVRGCDRIVPVDIYVPGCPPTAEA +YGI+QLQ K
Sbjct: 83 LRKVYDQMPEPRWVISMGSCANGGGYYHNSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGIIQLQSK 149
BLAST of FC910031 vs. ExPASy Swiss-Prot
Match: NUOB_POLNS (NADH-quinone oxidoreductase subunit B OS=Polynucleobacter necessarius (strain STIR1) GN=nuoB PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.094e-49 Identity = 53/72 (73.61%), Postives = 64/72 (88.89%), Query Frame = 3
Query: 306 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPA 521
FV + D ++N+ R GS+WPM+FGLACCAVEMMH GA+RYDLDRFG++FRPSPRQSD+M+VAGTL NKMAPA
Sbjct: 11 FVTTTADQLINWTRNGSLWPMTFGLACCAVEMMHAGASRYDLDRFGVVFRPSPRQSDLMIVAGTLCNKMAPA 82 HSP 2 Score: 93.9745 bits (232), Expect = 2.094e-49 Identity = 45/67 (67.16%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 523 LRKVYDQMPNPRWVIXXXXXXXXXXXXXXXXXVVRGCDRIVPVDIYVPGCPPTAEAPLYGILQLQKK 723
LRKVYDQMP PRWVI VVRGCDRIVPVDIYVPGCPPTAEA +YGI+QLQ K
Sbjct: 83 LRKVYDQMPEPRWVISMGSCANGGGYYHNSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGIIQLQSK 149
BLAST of FC910031 vs. ExPASy Swiss-Prot
Match: NUOB_MAGSA (NADH-quinone oxidoreductase subunit B OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=nuoB PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.719e-49 Identity = 54/72 (75.00%), Postives = 66/72 (91.67%), Query Frame = 3
Query: 306 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPA 521
FV++ +D VVN+ R GS+WPM+FGLACCAVEMMH G +RYD+DRFG++FRPSPRQSD+M+VAGTLTNKMAPA
Sbjct: 39 FVLASVDAVVNWARTGSLWPMTFGLACCAVEMMHAGCSRYDMDRFGVVFRPSPRQSDLMIVAGTLTNKMAPA 110 HSP 2 Score: 90.8929 bits (224), Expect = 2.719e-49 Identity = 44/67 (65.67%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 523 LRKVYDQMPNPRWVIXXXXXXXXXXXXXXXXXVVRGCDRIVPVDIYVPGCPPTAEAPLYGILQLQKK 723
LR+VYDQM PRWVI VVRGCDRIVPVDIYVPGCPP+AEA +YGILQLQKK
Sbjct: 111 LRRVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPSAEALMYGILQLQKK 177
BLAST of FC910031 vs. ExPASy Swiss-Prot
Match: NUOB1_CHRVO (NADH-quinone oxidoreductase subunit B 1 OS=Chromobacterium violaceum GN=nuoB1 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.729e-49 Identity = 55/72 (76.39%), Postives = 64/72 (88.89%), Query Frame = 3
Query: 306 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPA 521
FV + D ++NY R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSD+M+VAGTL NKMAPA
Sbjct: 11 FVTTTADKLINYTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDLMIVAGTLCNKMAPA 82 HSP 2 Score: 91.2781 bits (225), Expect = 2.729e-49 Identity = 44/67 (65.67%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 523 LRKVYDQMPNPRWVIXXXXXXXXXXXXXXXXXVVRGCDRIVPVDIYVPGCPPTAEAPLYGILQLQKK 723
LRKVYDQM PRWVI VVRGCDRIVPVD+YVPGCPPTAEA LYGI+QLQ K
Sbjct: 83 LRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNK 149 The following BLAST results are available for this feature:
BLAST of FC910031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC910031 ID=FC910031; Name=FC910031; organism=Citrus clementina; type=EST; length=724bpback to top |