FC910032

Overview
NameFC910032
Unique NameFC910032
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length857
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_SCHJY (Elongation factor G, mitochondrial OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) GN=mef1 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 3.242e-77
Identity = 139/201 (69.15%), Postives = 166/201 (82.59%), Query Frame = 3
Query:  273 ESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWK---------DYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGEK 848
            +++ RLRNIGISAHIDSGKTT TER+LFYTGRI +IHEVRG+D VGAKMDSM+LEREKGITIQSAAT C WK         DY INIIDTPGH+DFT+EVERALRVLDGA+L+LC+V GVQSQ+ITVDRQMRRY VPR+ FINK+DRMGA+PW+ ++Q  +KLR   AAVQ+P+G ED  +G+VDL+ + + Y  G  GEK
Sbjct:   57 DALSRLRNIGISAHIDSGKTTFTERVLFYTGRIKDIHEVRGKDNVGAKMDSMELEREKGITIQSAATYCNWKRKQKDGDEQDYIINIIDTPGHIDFTIEVERALRVLDGAVLILCAVSGVQSQTITVDRQMRRYNVPRITFINKMDRMGANPWRAIEQLNAKLRIAAAAVQIPIGSEDNLEGVVDLIHMQSIYNRGKKGEK 257          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_DROSI (Elongation factor G, mitochondrial OS=Drosophila simulans GN=GD22506 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 3.242e-77
Identity = 147/221 (66.52%), Postives = 177/221 (80.09%), Query Frame = 3
Query:  180 LLQGNFHLQSRQFSAGGNLARAKDDKEPWWKESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            LL GN  L+ R   + G    +   K    K  +ER+RNIGISAHIDSGKTTLTERILFYTGRI E+HEVRG+D VGA MDSM+LER++GITIQSAAT   WKD  INIIDTPGHVDFTVEVERALRVLDGA+LVLC+VGGVQSQ++TV+RQM+RY VP LAFINKLDR+G++P++VL Q RSK+ H+ A +Q+P+G+E   +G+VDLV+  A YF G HG
Sbjct:    7 LLTGNNTLRLRALESLGKAGYSSHAKFSEHKP-IERIRNIGISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGATMDSMELERQRGITIQSAATYTLWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGSNPYRVLSQMRSKMNHNAAFIQLPIGVESNCKGIVDLVREKAIYFEGEHG 226          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_DROSE (Elongation factor G, mitochondrial OS=Drosophila sechellia GN=GM13604 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 3.242e-77
Identity = 147/221 (66.52%), Postives = 177/221 (80.09%), Query Frame = 3
Query:  180 LLQGNFHLQSRQFSAGGNLARAKDDKEPWWKESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            LL GN  L+ R   + G    +   K    K  +ER+RNIGISAHIDSGKTTLTERILFYTGRI E+HEVRG+D VGA MDSM+LER++GITIQSAAT   WKD  INIIDTPGHVDFTVEVERALRVLDGA+LVLC+VGGVQSQ++TV+RQM+RY VP LAFINKLDR+G++P++VL Q RSK+ H+ A +Q+P+G+E   +G+VDLV+  A YF G HG
Sbjct:    7 LLTGNNTLRLRALESLGKAGYSSHAKFSEHKP-IERIRNIGISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGATMDSMELERQRGITIQSAATYTLWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGSNPYRVLSQMRSKMNHNAAFIQLPIGVESNCKGIVDLVREKAIYFEGEHG 226          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_DROME (Elongation factor G, mitochondrial OS=Drosophila melanogaster GN=CG4567 PE=2 SV=2)

HSP 1 Score: 288.5 bits (737), Expect = 3.242e-77
Identity = 147/221 (66.52%), Postives = 177/221 (80.09%), Query Frame = 3
Query:  180 LLQGNFHLQSRQFSAGGNLARAKDDKEPWWKESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            LL GN  L+ R   + G    +   K    K  +ER+RNIGISAHIDSGKTTLTERILFYTGRI E+HEVRG+D VGA MDSM+LER++GITIQSAAT   WKD  INIIDTPGHVDFTVEVERALRVLDGA+LVLC+VGGVQSQ++TV+RQM+RY VP LAFINKLDR+G++P++VL Q RSK+ H+ A +Q+P+G+E   +G+VDLV+  A YF G HG
Sbjct:    7 LLTGNNTLRLRALKSLGKAGYSSHAKFSEHKP-IERIRNIGISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGATMDSMELERQRGITIQSAATYTLWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGSNPYRVLSQMRSKMNHNAAFIQLPIGVESNCKGIVDLVREKAIYFEGEHG 226          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_ASPCL (Elongation factor G, mitochondrial OS=Aspergillus clavatus GN=mef1 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 3.242e-77
Identity = 141/209 (67.46%), Postives = 171/209 (81.82%), Query Frame = 3
Query:  249 DDKEPWWKESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW---------KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGEK 848
            D+ +P     + R+RNIGI+AHIDSGKTT TERILFYTGRI  IHEVRGRD VGAKMDSMDLEREKGITIQSAAT C W         + Y IN+IDTPGH+DFT+EVERALRVLDGA+++LC+V GVQSQ+ITVDRQMRRY VPR++FINK+DRMGA+P+K +DQ  SKL+   AAVQVP+G ED+F+G+VDL+++ + Y HG  GE+
Sbjct:   88 DNLDPVEATRLSRIRNIGIAAHIDSGKTTCTERILFYTGRIKAIHEVRGRDNVGAKMDSMDLEREKGITIQSAATFCDWVKKEDDGREEKYHINLIDTPGHIDFTIEVERALRVLDGAVMILCAVSGVQSQTITVDRQMRRYNVPRISFINKMDRMGANPFKAVDQINSKLKIPAAAVQVPIGAEDEFEGVVDLIRMKSIYNHGPSGEE 296          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_DROVI (Elongation factor G, mitochondrial OS=Drosophila virilis GN=GJ17621 PE=3 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 4.234e-77
Identity = 140/188 (74.47%), Postives = 165/188 (87.77%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            +ER+RNIGISAHIDSGKTTLTERILFYTGRI E+HEVRG+D VGA MDSM+LER++GITIQSAAT   WKD  INIIDTPGHVDFTVEVERALRVLDGA+LVLC+VGGVQSQ++TV+RQM+RY VP LAFINKLDR+G++P++VL Q RSKL H+ A +Q+P+G+E   +G+VDLVQ  A YF G HG
Sbjct:   41 IERIRNIGISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGATMDSMELERQRGITIQSAATYTLWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGSNPYRVLSQMRSKLNHNAAFIQLPIGVESNCKGIVDLVQERAIYFEGEHG 228          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG1_MYXXD (Elongation factor G 1 OS=Myxococcus xanthus (strain DK 1622) GN=fusA1 PE=3 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 9.432e-77
Identity = 137/189 (72.49%), Postives = 164/189 (86.77%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            +E++RNIGISAHIDSGKTTL+ERILFYTGRIHEIHEVRG+DGVGA MD+MDLEREKGITIQSAAT   W +Y IN+IDTPGHVDFT+EVER+LRVLDGAILVLCSV GVQSQSITVDRQM+RY VPR+AF+NK+DR GA+  +V  Q + KL HH   +Q+P+G ED+ +GL++L+++ AYYF G  GE
Sbjct:    7 IEKIRNIGISAHIDSGKTTLSERILFYTGRIHEIHEVRGKDGVGAIMDNMDLEREKGITIQSAATFAMWGEYNINLIDTPGHVDFTIEVERSLRVLDGAILVLCSVAGVQSQSITVDRQMKRYRVPRIAFVNKMDRSGANYDRVAAQLKEKLNHHPVQMQMPIGAEDRLKGLINLIEMKAYYFDGESGE 195          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_PENMQ (Elongation factor G, mitochondrial OS=Penicillium marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333) GN=mef1 PE=3 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.609e-76
Identity = 139/206 (67.48%), Postives = 169/206 (82.04%), Query Frame = 3
Query:  252 DKEPWWKESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW--------KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            D E W  + + ++RNIGI+AHIDSGKTT TER+LFYTGRI+ IHEVRGRD VGAKMDSMDLEREKGITIQSAAT C W        + Y  N+IDTPGH+DFT+EVERALRVLDGA+++LC+V GVQSQ+ITVDRQM+RY VPR++F+NK+DRMGA+P+K +DQ  SKLR   AAVQVP+G ED+FQG+VDL+++ A Y  G  GE
Sbjct:   94 DAEEW--KRISKVRNIGIAAHIDSGKTTATERVLFYTGRINSIHEVRGRDSVGAKMDSMDLEREKGITIQSAATFCDWVKKEDGKEEKYHFNLIDTPGHIDFTIEVERALRVLDGAVMILCAVSGVQSQTITVDRQMKRYNVPRISFVNKMDRMGANPFKAIDQINSKLRLPAAAVQVPIGAEDEFQGVVDLIRMKAIYNEGPRGE 297          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_DROWI (Elongation factor G, mitochondrial OS=Drosophila willistoni GN=GK24732 PE=3 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.609e-76
Identity = 138/188 (73.40%), Postives = 165/188 (87.77%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            +E++RNIGISAHIDSGKTTLTERILFYTGRI E+HEVRG+D VGA MDSM+LER++GITIQSAAT   WKD  INIIDTPGHVDFTVEVERALRVLDGA+LVLC+VGGVQSQ++TV+RQM+RY VP LAFINKLDR+G++P++VL Q RSK+ H+ A +Q+P+G+E   +G+VDLVQ  A YF G HG
Sbjct:   39 IEKIRNIGISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGATMDSMELERQRGITIQSAATYTLWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGSNPYRVLSQMRSKMNHNAAFIQLPIGVESNCKGIVDLVQEKAIYFEGDHG 226          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG2_ANADE (Elongation factor G 2 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=fusA2 PE=3 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.609e-76
Identity = 139/187 (74.33%), Postives = 162/187 (86.63%), Query Frame = 3
Query:  285 RLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            +LRNIGISAHIDSGKTTLTERILFYT RIH IHEV+G+DGVGA MDSM+LERE+GITI SAAT C WK   +NIIDTPGHVDFT+EVER+LRVLDGAILVLCSV GVQSQS+TVDRQMRRY VPRLAF+NK DR GA+P +V DQ R KL+H+   +Q+P+GLED+F+G+VDLV++ A+ F G  GE
Sbjct:    7 KLRNIGISAHIDSGKTTLTERILFYTKRIHAIHEVKGKDGVGATMDSMELERERGITIASAATHCEWKGLHLNIIDTPGHVDFTIEVERSLRVLDGAILVLCSVAGVQSQSLTVDRQMRRYNVPRLAFVNKCDRSGANPIRVKDQLREKLQHNPVLMQLPIGLEDKFEGVVDLVKMKAFRFSGDDGE 193          
The following BLAST results are available for this feature:
BLAST of FC910032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFGM_SCHJY3.242e-7769.15Elongation factor G, mitochondrial OS=Schizosaccha... [more]
EFGM_DROSI3.242e-7766.52Elongation factor G, mitochondrial OS=Drosophila s... [more]
EFGM_DROSE3.242e-7766.52Elongation factor G, mitochondrial OS=Drosophila s... [more]
EFGM_DROME3.242e-7766.52Elongation factor G, mitochondrial OS=Drosophila m... [more]
EFGM_ASPCL3.242e-7767.46Elongation factor G, mitochondrial OS=Aspergillus ... [more]
EFGM_DROVI4.234e-7774.47Elongation factor G, mitochondrial OS=Drosophila v... [more]
EFG1_MYXXD9.432e-7772.49Elongation factor G 1 OS=Myxococcus xanthus (strai... [more]
EFGM_PENMQ1.609e-7667.48Elongation factor G, mitochondrial OS=Penicillium ... [more]
EFGM_DROWI1.609e-7673.40Elongation factor G, mitochondrial OS=Drosophila w... [more]
EFG2_ANADE1.609e-7674.33Elongation factor G 2 OS=Anaeromyxobacter dehaloge... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA27CC11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA27CC11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910032 ID=FC910032; Name=FC910032; organism=Citrus clementina; type=EST; length=857bp
AACAGTACAACAAACCCTCGAACCCCAAACCCTTAAAAAATCTCAGGGTT
TAGGGTTTTAGATAAAAAAAAGCGATGGCTAGATTCCCACGATCTCCAGC
ACCACGTCTCCTCTACACTCTCTTCTCCTCTTCGAGAACGACACCGACCA
AATCCTCACCCCAATCTCCGTCTGCAGCCCTCCTCCAAGGAAACTTCCAC
CTCCAGTCGCGGCAGTTCTCGGCGGGAGGAAACCTCGCACGTGCGAAGGA
TGATAAGGAGCCATGGTGGAAGGAATCAATGGAGCGGCTCCGAAATATCG
GAATCTCGGCGCATATCGATTCCGGAAAAACTACACTAACCGAGCGAATT
CTGTTTTACACTGGACGGATTCACGAGATTCACGAGGTTCGAGGGCGAGA
CGGCGTCGGCGCCAAAATGGATTCTATGGATTTGGAGCGTGAGAAAGGTA
TCACAATTCAGTCAGCCGCCACTAGCTGTGCTTGGAAGGATTACCAGATT
AATATAATTGACACTCCTGGACACGTAGACTTCACAGTTGAAGTAGAAAG
GGCTTTGCGAGTTCTTGATGGCGCAATTCTTGTGCTTTGTAGTGTTGGTG
GCGTGCAAAGTCAATCAATTACCGTTGACCGGCAAATGAGGAGATACGAG
GTGCCAAGGCTGGCTTTCATTAACAAACTTGATAGAATGGGAGCTGATCC
ATGGAAAGTTTTGGATCAGGCAAGGTCTAAGCTGCGGCACCACTGTGCTG
CTGTGCAAGTTCCAATGGGATTGGAAGATCAGTTTCAGGGTCTTGTGGAC
CTTGTGCAGTTAACAGCTTATTATTTTCATGGTTCCCATGGTGAAAAAAA
TTGTCAC
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