FC910032

Overview
NameFC910032
Unique NameFC910032
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length857
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_EMENI (Elongation factor G, mitochondrial OS=Emericella nidulans GN=mef1 PE=3 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 2.101e-76
Identity = 139/208 (66.83%), Postives = 172/208 (82.69%), Query Frame = 3
Query:  249 DDKEPWWKESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW---------KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            ++ +P   E + R+RNIGI+AHIDSGKTT TER+LFYTGRI  IHEVRGRD VGAKMDSMDLEREKGITIQSAAT C W         + Y +N+IDTPGH+DFT+EVERALRVLDGA+++LC+V GVQSQ+ITVDRQMRRY VPR++F+NK+DRMGA+P+K +DQ  +KL+   AAVQVP+G ED+F+G+VDLV++ A Y  GS+GE
Sbjct:   86 ENLDPVEAERLSRVRNIGIAAHIDSGKTTCTERVLFYTGRIKAIHEVRGRDSVGAKMDSMDLEREKGITIQSAATFCDWVKKDEDGKEQKYHMNLIDTPGHIDFTIEVERALRVLDGAVMILCAVSGVQSQTITVDRQMRRYNVPRISFVNKMDRMGANPFKSVDQINTKLKLPAAAVQVPIGAEDEFEGVVDLVRMKAIYNQGSNGE 293          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_DROGR (Elongation factor G, mitochondrial OS=Drosophila grimshawi GN=GH13155 PE=3 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.584e-76
Identity = 140/190 (73.68%), Postives = 166/190 (87.37%), Query Frame = 3
Query:  273 ESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            +S+ER+RNIGISAHIDSGKTTLTERILFYTGRI E+HEVRG+D VGA MDSM+LER++GITIQSAAT   WKD  INIIDTPGHVDFTVEVERALRVLDGA+LVLC+VGGVQSQ++TV+RQM+RY VP LAFINKLDR+G++P +VL Q RSK+ H+ A +Q+P+G+E   +GLVDLVQ  A YF G +G
Sbjct:   39 KSIERIRNIGISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGATMDSMELERQRGITIQSAATYTMWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGSNPNRVLSQLRSKMNHNAAFIQLPIGVESHCKGLVDLVQERAVYFEGENG 228          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_DROAN (Elongation factor G, mitochondrial OS=Drosophila ananassae GN=GF14034 PE=3 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 6.114e-76
Identity = 137/188 (72.87%), Postives = 165/188 (87.77%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            ++++RNIGISAHIDSGKTTLTERILFYTGRI E+HEVRG+D VGA MDSM+LER++GITIQSAAT   WKD  INIIDTPGHVDFTVEVERALRVLDGA+LVLC+VGGVQSQ++TV+RQM+RY VP LAFINKLDRMG++P++VL Q RSK+ H+ A +Q+P+G+E   +G+VDLV+  A YF G HG
Sbjct:   39 IDKIRNIGISAHIDSGKTTLTERILFYTGRIVEMHEVRGKDNVGATMDSMELERQRGITIQSAATYTLWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRMGSNPYRVLSQMRSKMNHNAAFIQLPIGVESNCKGIVDLVRERAIYFEGEHG 226          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_COCIM (Elongation factor G, mitochondrial OS=Coccidioides immitis GN=MEF1 PE=3 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 7.985e-76
Identity = 136/207 (65.70%), Postives = 169/207 (81.64%), Query Frame = 3
Query:  249 DDKEPWWKESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW--------KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            +  +P     + ++RNIGI+AHIDSGKTT TER+LFYTGRI  IHEVRGRD VGAKMDSMDLEREKGITIQSAAT C W        + Y IN+IDTPGH+DFT+EVERALRVLDGA+L+LC+V GVQSQ+ITVDRQMRRY VPR++FINK+DRMG++P++ ++Q   KL+ H AAVQVP+GLED+F+G+VD++++ A Y  G  GE
Sbjct:   88 ESMDPAEAARISKVRNIGIAAHIDSGKTTSTERVLFYTGRIQAIHEVRGRDSVGAKMDSMDLEREKGITIQSAATFCDWVKKENGKDEKYHINLIDTPGHIDFTIEVERALRVLDGAVLILCAVSGVQSQTITVDRQMRRYNVPRISFINKMDRMGSNPFRAIEQINQKLKMHAAAVQVPIGLEDEFKGVVDIIRMKAIYNEGPRGE 294          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_TALSN (Elongation factor G, mitochondrial OS=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) GN=mef1 PE=3 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 1.043e-75
Identity = 137/206 (66.50%), Postives = 169/206 (82.04%), Query Frame = 3
Query:  252 DKEPWWKESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW--------KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            D E W  + + ++RNIGI+AHIDSGKTT TER+LFYTGRI+ IHEVRGRD VGAKMDSMDLEREKGITIQSAAT C W        + Y  N+IDTPGH+DFT+EVERALRVLDGA+++LC+V GVQSQ+ITVDRQM+RY VPR++F+NK+DRMGA+P+K +DQ  +KL+   AAVQVP+G ED+FQG+VDL+++ A Y  G  GE
Sbjct:   95 DAEEW--KRISKVRNIGIAAHIDSGKTTATERVLFYTGRINAIHEVRGRDSVGAKMDSMDLEREKGITIQSAATFCDWVKKENGKEEKYHFNLIDTPGHIDFTIEVERALRVLDGAVMILCAVSGVQSQTITVDRQMKRYNVPRISFVNKMDRMGANPFKAIDQINNKLKLPAAAVQVPIGAEDEFQGVVDLIRMKAIYNEGPRGE 298          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_MALGO (Elongation factor G, mitochondrial OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=MEF1 PE=3 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 1.043e-75
Identity = 145/216 (67.13%), Postives = 167/216 (77.31%), Query Frame = 3
Query:  273 ESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWK--------------------------DYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            E + R RN+GISAHIDSGKTTLTER+L+YTGRI +IHEVRGRD VGAKMDSM+LEREKGITIQSAAT C WK                          DY INIIDTPGHVDFT+EVERALRVLDGA+LVLC+V GVQSQ++TVDRQMRRY VPRL+FINK+DR GA+PW+V++Q R+KLR   AA+QVP+G ED FQGLVDLV+  A Y  G+ G
Sbjct:   31 ERLLRQRNVGISAHIDSGKTTLTERVLYYTGRIKDIHEVRGRDEVGAKMDSMELEREKGITIQSAATYCNWKATPPTERSNMTGDAADESTVTTQKKHDYHINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVSGVQSQTMTVDRQMRRYSVPRLSFINKMDRAGANPWRVVEQIRTKLRMPAAAMQVPIGAEDNFQGLVDLVRWKAVYNEGTKG 246          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_PYRTR (Elongation factor G, mitochondrial OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=mef1 PE=3 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.362e-75
Identity = 144/232 (62.07%), Postives = 175/232 (75.43%), Query Frame = 3
Query:  213 QFSAGGNLARAKDDK------------EPWWKESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW---------KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            Q +A   L +AKDD             +P   E + R+RNIGI+AHIDSGKTT TER+LFYTGRI+ IHEVRG+D VGAKMDSMDLEREKGITIQSAAT C W         + Y IN+IDTPGH+DFT+EVERALRVLDGA+++LC+V GVQSQ+ITVDRQMRRY +PR++F+NK+DRMGA+PWK ++Q   KLR   AA+QVP+G ED F G+VDLV++ A Y  G  GE
Sbjct:   65 QTTAAKVLEQAKDDPSTLTQEKIVENLDPVEWERLSRVRNIGIAAHIDSGKTTATERVLFYTGRINAIHEVRGKDAVGAKMDSMDLEREKGITIQSAATFCDWVKKNDEGKEEKYHINLIDTPGHIDFTIEVERALRVLDGAVMILCAVSGVQSQTITVDRQMRRYNIPRISFVNKMDRMGANPWKAVEQINQKLRIPAAALQVPIGREDGFLGVVDLVRMKAIYNEGPKGE 296          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_CULQU (Elongation factor G, mitochondrial OS=Culex quinquefasciatus GN=CPIJ005834 PE=3 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.362e-75
Identity = 138/188 (73.40%), Postives = 164/188 (87.23%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            +ER+RNIGISAHIDSGKTTLTERILFYTGRI E+HEV+G+D VGA MDSM+LER++GITIQSAAT   WKD+ INIIDTPGHVDFTVEVERALRVLDGA+LVLCSVGGVQSQ++TV+RQM+RY VP LAFINKLDRMGA+P++VL Q +SKL H+ A +Q+P+G+E   +G+VDLV+  A YF    G
Sbjct:   37 LERIRNIGISAHIDSGKTTLTERILFYTGRIKEMHEVKGKDNVGATMDSMELERQRGITIQSAATYTVWKDHNINIIDTPGHVDFTVEVERALRVLDGAVLVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRMGANPYRVLGQMKSKLNHNAAFIQLPIGVESNCKGIVDLVKQKALYFDDQLG 224          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_LACBS (Elongation factor G, mitochondrial OS=Laccaria bicolor (strain S238N-H82) GN=MEF1 PE=3 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.779e-75
Identity = 141/196 (71.94%), Postives = 164/196 (83.67%), Query Frame = 3
Query:  291 RNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWK----------DYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGEK 848
            RNIG+SAHIDSGKTTLTERIL+YTGRI +IHEVRGRD VGAKMDSMDLEREKGITIQSAAT C W+          +Y INIIDTPGHVDFT+EVERALRVLDGAILVLC+V GVQSQ+ TVDRQMRRY VPR++FINK+DR GA+PW++++Q RSKLR   AAVQVP+G+ED+F+G+VDLV   + Y  G  G +
Sbjct:   35 RNIGVSAHIDSGKTTLTERILYYTGRISQIHEVRGRDAVGAKMDSMDLEREKGITIQSAATFCDWETTDVATGNKQNYAINIIDTPGHVDFTIEVERALRVLDGAILVLCAVAGVQSQTTTVDRQMRRYGVPRISFINKMDRPGANPWRIVNQIRSKLRIPAAAVQVPIGIEDEFKGVVDLVHWRSIYNEGQKGNE 230          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_ANOGA (Elongation factor G, mitochondrial OS=Anopheles gambiae GN=AGAP009737 PE=3 SV=4)

HSP 1 Score: 282.722 bits (722), Expect = 1.779e-75
Identity = 138/192 (71.88%), Postives = 166/192 (86.46%), Query Frame = 3
Query:  273 ESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGEK 848
            + +E++RNIGISAHIDSGKTTLTERILFYTGRI E+HEV+G+D VGA MDSM+LER++GITIQSAAT   WKD+ INIIDTPGHVDFTVEVERALRVLDGA+LVLCSVGGVQSQ++TV+RQM+RY VP LAFINKLDR GA+P++VL Q RSKL H+ A VQ+P+G+E   +G++DLV+  A YF   +G K
Sbjct:   36 KQLEKIRNIGISAHIDSGKTTLTERILFYTGRIKEMHEVKGKDNVGATMDSMELERQRGITIQSAATYTIWKDHNINIIDTPGHVDFTVEVERALRVLDGAVLVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRSGANPYRVLGQMRSKLNHNAAFVQLPIGVESNCKGVIDLVKQRALYFEEPYGLK 227          
The following BLAST results are available for this feature:
BLAST of FC910032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFGM_EMENI2.101e-7666.83Elongation factor G, mitochondrial OS=Emericella n... [more]
EFGM_DROGR3.584e-7673.68Elongation factor G, mitochondrial OS=Drosophila g... [more]
EFGM_DROAN6.114e-7672.87Elongation factor G, mitochondrial OS=Drosophila a... [more]
EFGM_COCIM7.985e-7665.70Elongation factor G, mitochondrial OS=Coccidioides... [more]
EFGM_TALSN1.043e-7566.50Elongation factor G, mitochondrial OS=Talaromyces ... [more]
EFGM_MALGO1.043e-7567.13Elongation factor G, mitochondrial OS=Malassezia g... [more]
EFGM_PYRTR1.362e-7562.07Elongation factor G, mitochondrial OS=Pyrenophora ... [more]
EFGM_CULQU1.362e-7573.40Elongation factor G, mitochondrial OS=Culex quinqu... [more]
EFGM_LACBS1.779e-7571.94Elongation factor G, mitochondrial OS=Laccaria bic... [more]
EFGM_ANOGA1.779e-7571.88Elongation factor G, mitochondrial OS=Anopheles ga... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA27CC11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA27CC11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910032 ID=FC910032; Name=FC910032; organism=Citrus clementina; type=EST; length=857bp
AACAGTACAACAAACCCTCGAACCCCAAACCCTTAAAAAATCTCAGGGTT
TAGGGTTTTAGATAAAAAAAAGCGATGGCTAGATTCCCACGATCTCCAGC
ACCACGTCTCCTCTACACTCTCTTCTCCTCTTCGAGAACGACACCGACCA
AATCCTCACCCCAATCTCCGTCTGCAGCCCTCCTCCAAGGAAACTTCCAC
CTCCAGTCGCGGCAGTTCTCGGCGGGAGGAAACCTCGCACGTGCGAAGGA
TGATAAGGAGCCATGGTGGAAGGAATCAATGGAGCGGCTCCGAAATATCG
GAATCTCGGCGCATATCGATTCCGGAAAAACTACACTAACCGAGCGAATT
CTGTTTTACACTGGACGGATTCACGAGATTCACGAGGTTCGAGGGCGAGA
CGGCGTCGGCGCCAAAATGGATTCTATGGATTTGGAGCGTGAGAAAGGTA
TCACAATTCAGTCAGCCGCCACTAGCTGTGCTTGGAAGGATTACCAGATT
AATATAATTGACACTCCTGGACACGTAGACTTCACAGTTGAAGTAGAAAG
GGCTTTGCGAGTTCTTGATGGCGCAATTCTTGTGCTTTGTAGTGTTGGTG
GCGTGCAAAGTCAATCAATTACCGTTGACCGGCAAATGAGGAGATACGAG
GTGCCAAGGCTGGCTTTCATTAACAAACTTGATAGAATGGGAGCTGATCC
ATGGAAAGTTTTGGATCAGGCAAGGTCTAAGCTGCGGCACCACTGTGCTG
CTGTGCAAGTTCCAATGGGATTGGAAGATCAGTTTCAGGGTCTTGTGGAC
CTTGTGCAGTTAACAGCTTATTATTTTCATGGTTCCCATGGTGAAAAAAA
TTGTCAC
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