FC910032

Overview
NameFC910032
Unique NameFC910032
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length857
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3433 contig Ccv1_Contig3433:1..856. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_YARLI (Elongation factor G, mitochondrial OS=Yarrowia lipolytica GN=MEF1 PE=3 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 2.323e-75
Identity = 136/193 (70.47%), Postives = 160/193 (82.90%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW----KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            + R+RNIGISAHIDSGKTT +ERILFYTGR  EIHEVRG+DGVGAKMD MDLEREKGITIQSAAT   W    +DY  N+IDTPGH+DFT+EVERALRVLDGA+LV+C+V GVQSQ++TVDRQMRRY VPR+ FINK+DRMGADPWK +DQ  +KL+   AA+QVP+G E    G+VD+V+  AYY  G+ GE
Sbjct:   55 LARMRNIGISAHIDSGKTTFSERILFYTGRTKEIHEVRGKDGVGAKMDHMDLEREKGITIQSAATYATWIKENQDYHFNVIDTPGHIDFTIEVERALRVLDGAVLVVCAVSGVQSQTMTVDRQMRRYNVPRVTFINKMDRMGADPWKAIDQINAKLKTRAAAIQVPIGSEGDLAGVVDIVKEVAYYNDGASGE 247          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_DROPS (Elongation factor G, mitochondrial OS=Drosophila pseudoobscura pseudoobscura GN=GA18263 PE=3 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 2.323e-75
Identity = 136/188 (72.34%), Postives = 165/188 (87.77%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            +E++RNIGISAHIDSGKTTLTERILFYTGRI E+HEVRG+D VGA MDSM+LER++GITIQSAAT   WKD  +NIIDTPGHVDFTVEVERALRVLDGA+LVLC+VGGVQSQ++TV+RQM+RY VP LAFINKLDR+G++P++VL Q RSK+ H+ A +Q+P+G+E   +GLVDLV+  A YF G +G
Sbjct:   38 IEKIRNIGISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGATMDSMELERQRGITIQSAATYTMWKDTNVNIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGSNPYRVLSQMRSKMNHNAAFIQLPIGVESNCKGLVDLVREQAIYFEGENG 225          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_PENCW (Elongation factor G, mitochondrial OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=mef1 PE=3 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 3.034e-75
Identity = 136/209 (65.07%), Postives = 170/209 (81.34%), Query Frame = 3
Query:  249 DDKEPWWKESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW---------KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGEK 848
            D+ +P     +++ RNIGI+AHIDSGKTT TER+LFYTGRI  IHEVRGRD VGAKMDSMDLEREKGITIQSAAT C W         + Y +N+IDTPGH+DFT+EVERALRVLDGA+++LC+V GVQSQ+ITVDRQMRRY VPR++F+NK+DRMGA+P+K +DQ  +KL+   AAVQVP+G ED+F+G+VDL+++ A Y  G  GE+
Sbjct:   86 DNLDPVEAARLDKCRNIGIAAHIDSGKTTCTERVLFYTGRIKAIHEVRGRDSVGAKMDSMDLEREKGITIQSAATFCDWVKKDKEGVEQKYHLNLIDTPGHIDFTIEVERALRVLDGAVMILCAVSGVQSQTITVDRQMRRYNVPRISFVNKMDRMGANPFKAVDQINNKLKMPAAAVQVPIGAEDEFEGVVDLIRMKALYNVGGSGEE 294          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_ASPFU (Elongation factor G, mitochondrial OS=Aspergillus fumigatus GN=mef1 PE=3 SV=2)

HSP 1 Score: 281.952 bits (720), Expect = 3.034e-75
Identity = 137/208 (65.87%), Postives = 170/208 (81.73%), Query Frame = 3
Query:  249 DDKEPWWKESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW---------KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            D+ +P     + RLRNIGI+AHIDSGKTT TER+LFYTGRI  IHEVRGRD VGAKMDSMDLEREKGITIQSAAT C W         + Y IN+IDTPGH+DFT+EVERALRVLDGA+++LC+V GVQSQ+ITVDRQMRRY VPR++F+NK+DRMGA+P+K ++Q  +KL+   AAVQVP+G ED+F+G+VDL+++ + Y  G +GE
Sbjct:   89 DNLDPAEAIRLSRLRNIGIAAHIDSGKTTCTERVLFYTGRIKAIHEVRGRDNVGAKMDSMDLEREKGITIQSAATFCDWIKKGDDGKEEKYHINLIDTPGHIDFTIEVERALRVLDGAVMILCAVSGVQSQTITVDRQMRRYNVPRISFVNKMDRMGANPFKAVEQINTKLKIPAAAVQVPIGAEDEFEGVVDLIRMKSIYNDGPNGE 296          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_ASPFC (Elongation factor G, mitochondrial OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=mef1 PE=3 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 3.034e-75
Identity = 137/208 (65.87%), Postives = 170/208 (81.73%), Query Frame = 3
Query:  249 DDKEPWWKESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW---------KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            D+ +P     + RLRNIGI+AHIDSGKTT TER+LFYTGRI  IHEVRGRD VGAKMDSMDLEREKGITIQSAAT C W         + Y IN+IDTPGH+DFT+EVERALRVLDGA+++LC+V GVQSQ+ITVDRQMRRY VPR++F+NK+DRMGA+P+K ++Q  +KL+   AAVQVP+G ED+F+G+VDL+++ + Y  G +GE
Sbjct:   89 DNLDPAEAIRLSRLRNIGIAAHIDSGKTTCTERVLFYTGRIKAIHEVRGRDNVGAKMDSMDLEREKGITIQSAATFCDWIKKGDDGKEEKYHINLIDTPGHIDFTIEVERALRVLDGAVMILCAVSGVQSQTITVDRQMRRYNVPRISFVNKMDRMGANPFKAVEQINTKLKIPAAAVQVPIGAEDEFEGVVDLIRMKSIYNDGPNGE 296          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_NEOFI (Elongation factor G, mitochondrial OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=mef1 PE=3 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 3.963e-75
Identity = 137/208 (65.87%), Postives = 169/208 (81.25%), Query Frame = 3
Query:  249 DDKEPWWKESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW---------KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            D+ +P     + RLRNIGI+AHIDSGKTT TER+LFYTGRI  IHEVRGRD VGAKMDSMDLEREKGITIQSAAT C W         + Y IN+IDTPGH+DFT+EVERALRVLDGA+++LC+V GVQSQ+ITVDRQMRRY VPR++F+NK+DRMGA+P+K ++Q  +KL+   AAVQVP+G ED+F+G+VDL+++ + Y  G  GE
Sbjct:   89 DNLDPAEAIRLSRLRNIGIAAHIDSGKTTCTERVLFYTGRIKAIHEVRGRDNVGAKMDSMDLEREKGITIQSAATFCDWVKKGDDGKEEKYHINLIDTPGHIDFTIEVERALRVLDGAVMILCAVSGVQSQTITVDRQMRRYNVPRISFVNKMDRMGANPFKAVEQINTKLKIPAAAVQVPIGAEDEFEGVVDLIRMKSLYNEGPSGE 296          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG2_BDEBA (Elongation factor G 2 OS=Bdellovibrio bacteriovorus GN=fusA2 PE=3 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 3.963e-75
Identity = 139/192 (72.40%), Postives = 159/192 (82.81%), Query Frame = 3
Query:  270 KESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            K +++ +RNIGISAHIDSGKTT +ERILFY GRIH IHEVRG+DGVGA MDSMDLEREKGITIQSAAT   WKDY IN+IDTPGHVDFTVEVER+LRVLDGAIL+LC V GVQSQSITVDRQM+RY VPRLAF+NKLDR GA+P++V D    KLR +   +Q+P+GLEDQ +G VDL  + AY   G  GE
Sbjct:    4 KWNIDMVRNIGISAHIDSGKTTTSERILFYGGRIHAIHEVRGKDGVGATMDSMDLEREKGITIQSAATQVQWKDYTINLIDTPGHVDFTVEVERSLRVLDGAILLLCGVAGVQSQSITVDRQMKRYNVPRLAFVNKLDRQGANPYRVTDALIEKLRLNAVMIQIPIGLEDQHRGHVDLTDMKAYINQGESGE 195          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_ASPTN (Elongation factor G, mitochondrial OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=mef1 PE=3 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 6.760e-75
Identity = 140/209 (66.99%), Postives = 171/209 (81.82%), Query Frame = 3
Query:  249 DDKEPWWKESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW--KD-------YQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGEK 848
            D+ +P   E + R+RNIGI+AHIDSGKTT TER+LFYTGRI  IHEVRG D VGAKMDSMDLEREKGITIQSAAT C W  KD       Y IN+IDTPGH+DFT+EVERALRVLDGA+++LC+V GVQSQ++TVDRQMRRY VPR++FINK+DRMGA+P+K +DQ  +KL+   AAVQVP+G ED+F+G+VDL+++ A Y  G  GE+
Sbjct:   89 DNLDPVEAERLSRVRNIGIAAHIDSGKTTCTERVLFYTGRIKAIHEVRGGDKVGAKMDSMDLEREKGITIQSAATFCDWVKKDKEGKEHKYHINLIDTPGHIDFTIEVERALRVLDGAVMILCAVSGVQSQTMTVDRQMRRYNVPRISFINKMDRMGANPFKAIDQINTKLKIPAAAVQVPIGAEDEFEGVVDLLRMKAIYNVGPSGEE 297          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_ASPNC (Elongation factor G, mitochondrial OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=mef1 PE=3 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 6.760e-75
Identity = 136/209 (65.07%), Postives = 169/209 (80.86%), Query Frame = 3
Query:  249 DDKEPWWKESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW---------KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGEK 848
            ++ +P     + R+RNIGI+AHIDSGKTT TER+LFYTGRI  IHEVRGRD VGAKMDSMDLEREKGITIQSAAT C W         + Y +N+IDTPGH+DFT+EVERALRVLDGA+++LC+V GVQSQ+ITVDRQMRRY VPR++F+NK+DRMGA+P+K +DQ   KL+   AAVQVP+G ED+F+G+VDL+++ A Y  G  GE+
Sbjct:   88 ENLDPVEAARLSRVRNIGIAAHIDSGKTTCTERVLFYTGRIKAIHEVRGRDAVGAKMDSMDLEREKGITIQSAATFCDWVKKDAEGKEQKYHLNLIDTPGHIDFTIEVERALRVLDGAVMILCAVSGVQSQTITVDRQMRRYNVPRISFVNKMDRMGANPFKAVDQINKKLKIPAAAVQVPIGAEDEFEGVVDLLRMKAIYNRGPSGEE 296          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_AEDAE (Elongation factor G, mitochondrial OS=Aedes aegypti GN=AAEL010742 PE=3 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 6.760e-75
Identity = 138/188 (73.40%), Postives = 163/188 (86.70%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            +ER+RNIGISAHIDSGKTTLTERILFYTGRI ++HEV+G+D VGA MDSM+LER++GITIQSAAT   WKD+ INIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQ++TV+RQM+RY VP LAFINKLDR GA+P++VL Q RSKL H+ A +Q+P+G+E   +G+VDLV+  A YF    G
Sbjct:   39 LERIRNIGISAHIDSGKTTLTERILFYTGRIKQMHEVKGKDNVGATMDSMELERQRGITIQSAATYTMWKDHNINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRTGANPYRVLGQMRSKLNHNAAFIQLPIGVESNCKGIVDLVKQRALYFEDHLG 226          
The following BLAST results are available for this feature:
BLAST of FC910032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFGM_YARLI2.323e-7570.47Elongation factor G, mitochondrial OS=Yarrowia lip... [more]
EFGM_DROPS2.323e-7572.34Elongation factor G, mitochondrial OS=Drosophila p... [more]
EFGM_PENCW3.034e-7565.07Elongation factor G, mitochondrial OS=Penicillium ... [more]
EFGM_ASPFU3.034e-7565.87Elongation factor G, mitochondrial OS=Aspergillus ... [more]
EFGM_ASPFC3.034e-7565.87Elongation factor G, mitochondrial OS=Aspergillus ... [more]
EFGM_NEOFI3.963e-7565.87Elongation factor G, mitochondrial OS=Neosartorya ... [more]
EFG2_BDEBA3.963e-7572.40Elongation factor G 2 OS=Bdellovibrio bacteriovoru... [more]
EFGM_ASPTN6.760e-7566.99Elongation factor G, mitochondrial OS=Aspergillus ... [more]
EFGM_ASPNC6.760e-7565.07Elongation factor G, mitochondrial OS=Aspergillus ... [more]
EFGM_AEDAE6.760e-7573.40Elongation factor G, mitochondrial OS=Aedes aegypt... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA27CC11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA27CC11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910032 ID=FC910032; Name=FC910032; organism=Citrus clementina; type=EST; length=857bp
AACAGTACAACAAACCCTCGAACCCCAAACCCTTAAAAAATCTCAGGGTT
TAGGGTTTTAGATAAAAAAAAGCGATGGCTAGATTCCCACGATCTCCAGC
ACCACGTCTCCTCTACACTCTCTTCTCCTCTTCGAGAACGACACCGACCA
AATCCTCACCCCAATCTCCGTCTGCAGCCCTCCTCCAAGGAAACTTCCAC
CTCCAGTCGCGGCAGTTCTCGGCGGGAGGAAACCTCGCACGTGCGAAGGA
TGATAAGGAGCCATGGTGGAAGGAATCAATGGAGCGGCTCCGAAATATCG
GAATCTCGGCGCATATCGATTCCGGAAAAACTACACTAACCGAGCGAATT
CTGTTTTACACTGGACGGATTCACGAGATTCACGAGGTTCGAGGGCGAGA
CGGCGTCGGCGCCAAAATGGATTCTATGGATTTGGAGCGTGAGAAAGGTA
TCACAATTCAGTCAGCCGCCACTAGCTGTGCTTGGAAGGATTACCAGATT
AATATAATTGACACTCCTGGACACGTAGACTTCACAGTTGAAGTAGAAAG
GGCTTTGCGAGTTCTTGATGGCGCAATTCTTGTGCTTTGTAGTGTTGGTG
GCGTGCAAAGTCAATCAATTACCGTTGACCGGCAAATGAGGAGATACGAG
GTGCCAAGGCTGGCTTTCATTAACAAACTTGATAGAATGGGAGCTGATCC
ATGGAAAGTTTTGGATCAGGCAAGGTCTAAGCTGCGGCACCACTGTGCTG
CTGTGCAAGTTCCAATGGGATTGGAAGATCAGTTTCAGGGTCTTGTGGAC
CTTGTGCAGTTAACAGCTTATTATTTTCATGGTTCCCATGGTGAAAAAAA
TTGTCAC
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