FC910032

Overview
NameFC910032
Unique NameFC910032
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length857
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG1_SYNAS (Elongation factor G 1 OS=Syntrophus aciditrophicus (strain SB) GN=fusA1 PE=3 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 8.828e-75
Identity = 132/192 (68.75%), Postives = 166/192 (86.46%), Query Frame = 3
Query:  270 KESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            K  ++++RNIGISAHIDSGKTTLTERILFYT RIH +H+V+G+DGVGA MDSM+LERE+GITI SAAT C W D+++NIIDTPGHVDFT+EVERALRVLDGAILVLC+VGGVQSQSITVD QM+RY+VP +AF+NK DR GA+P +V++Q +++L H+   +Q+P+GLE  FQG+VDL+ + A YF G+ GE
Sbjct:    2 KNDIKKVRNIGISAHIDSGKTTLTERILFYTKRIHAMHDVKGKDGVGATMDSMELERERGITISSAATFCTWGDHEVNIIDTPGHVDFTIEVERALRVLDGAILVLCAVGGVQSQSITVDAQMKRYKVPCVAFVNKCDRSGANPARVVEQLKTRLGHNALLMQLPIGLEADFQGIVDLISMKAVYFDGAGGE 193          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_VANPO (Elongation factor G, mitochondrial OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=MEF1 PE=3 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.153e-74
Identity = 133/195 (68.21%), Postives = 162/195 (83.08%), Query Frame = 3
Query:  273 ESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW----KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            ++  +LRNIGISAHIDSGKTT TER+L+YTGRI  IHEVRGRD VGAKMDSMDLEREKGITIQSAAT C+W    KDY  N+IDTPGH+DFT+EVERALRVLDGA+L++C+V GVQSQ++TVDRQMRRY VPR+ FINK+DRMG++P+K ++Q  SKL+   AA+QVP+G E   +G+VD++   AYY  G  GE
Sbjct:   81 QAASKLRNIGISAHIDSGKTTFTERVLYYTGRIKAIHEVRGRDNVGAKMDSMDLEREKGITIQSAATYCSWNKDQKDYHFNLIDTPGHIDFTIEVERALRVLDGAVLIVCAVSGVQSQTVTVDRQMRRYNVPRITFINKMDRMGSNPFKAIEQINSKLQISAAALQVPIGSESNLRGVVDIINRVAYYNKGDQGE 275          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_CANDC (Elongation factor G, mitochondrial OS=Candida dubliniensis (strain CD36 / CBS 7987 / NCPF 3949 / NRRL Y-17841) GN=MEF1 PE=3 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.506e-74
Identity = 133/195 (68.21%), Postives = 161/195 (82.56%), Query Frame = 3
Query:  273 ESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW----KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            ++  RLRNIGISAHIDSGKTT TER+LFYTGRI  IHEVRG+D VGAKMD MDLEREKGITIQSAAT C+W    K Y  N+IDTPGH+DFT+EVERALRVLDGA+LV+C+V GVQSQ++TVDRQMRRY VPR+ FINK+DRMGA+PW+ ++Q  +KL+   AA+QVP+G E+  QG+V+++   A Y  GS GE
Sbjct:   63 QASTRLRNIGISAHIDSGKTTFTERVLFYTGRIKAIHEVRGKDSVGAKMDHMDLEREKGITIQSAATYCSWDKDDKSYHFNLIDTPGHIDFTIEVERALRVLDGAVLVVCAVAGVQSQTVTVDRQMRRYNVPRVTFINKMDRMGANPWRAIEQINAKLKIPAAAIQVPIGAEENLQGVVNIIDRVALYNEGSQGE 257          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_ASPOR (Elongation factor G, mitochondrial OS=Aspergillus oryzae GN=mef1 PE=3 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.967e-74
Identity = 145/241 (60.17%), Postives = 182/241 (75.52%), Query Frame = 3
Query:  192 NFHLQSRQFSAG-----------GNLARAK--DDKEPWWKESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW--KD-------YQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGEK 848
            N HLQ R+ ++G            NL++    ++ +P     + R+RNIGI+AHIDSGKTT TER+LFYTGRI  IHEVRG D VGAKMDSMDLEREKGITIQSAAT C W  KD       Y  N+IDTPGH+DFT+EVERALRVLDGA+++LC+V GVQSQ+ITVDRQMRRY VPR++F+NK+DRMGA+P+K +DQ  +KL+   AAVQVP+G ED+F+G+VDL+++ A Y  G  GE+
Sbjct:   54 NKHLQQRRNASGTAAAVLEAAASDNLSQEAIIENLDPVEAGRLSRVRNIGIAAHIDSGKTTCTERVLFYTGRIKAIHEVRGGDKVGAKMDSMDLEREKGITIQSAATFCDWVKKDEDGKENKYHFNLIDTPGHIDFTIEVERALRVLDGAVMILCAVSGVQSQTITVDRQMRRYNVPRISFVNKMDRMGANPFKAVDQINNKLKLPAAAVQVPIGAEDEFEGVVDLIRMKAIYNRGPSGEE 294          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_ASPFN (Elongation factor G, mitochondrial OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=mef1 PE=3 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.967e-74
Identity = 145/241 (60.17%), Postives = 182/241 (75.52%), Query Frame = 3
Query:  192 NFHLQSRQFSAG-----------GNLARAK--DDKEPWWKESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW--KD-------YQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGEK 848
            N HLQ R+ ++G            NL++    ++ +P     + R+RNIGI+AHIDSGKTT TER+LFYTGRI  IHEVRG D VGAKMDSMDLEREKGITIQSAAT C W  KD       Y  N+IDTPGH+DFT+EVERALRVLDGA+++LC+V GVQSQ+ITVDRQMRRY VPR++F+NK+DRMGA+P+K +DQ  +KL+   AAVQVP+G ED+F+G+VDL+++ A Y  G  GE+
Sbjct:   54 NKHLQQRRNASGTAAAVLEAAASDNLSQEAIIENLDPVEAGRLSRVRNIGIAAHIDSGKTTCTERVLFYTGRIKAIHEVRGGDKVGAKMDSMDLEREKGITIQSAATFCDWVKKDEDGKENKYHFNLIDTPGHIDFTIEVERALRVLDGAVMILCAVSGVQSQTITVDRQMRRYNVPRISFVNKMDRMGANPFKAVDQINNKLKLPAAAVQVPIGAEDEFEGVVDLIRMKAIYNRGPSGEE 294          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_HUMAN (Elongation factor G, mitochondrial OS=Homo sapiens GN=GFM1 PE=1 SV=2)

HSP 1 Score: 278.87 bits (712), Expect = 2.569e-74
Identity = 133/188 (70.74%), Postives = 162/188 (86.17%), Query Frame = 3
Query:  282 ERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            E++RNIGISAHIDSGKTTLTER+L+YTGRI ++HEV+G+DGVGA MDSM+LER++GITIQSAAT   WKD  INIIDTPGHVDFT+EVERALRVLDGA+LVLC+VGGVQ Q++TV+RQM+RY VP L FINKLDRMG++P + L Q RSKL H+ A +Q+PMGLE  F+G+VDL++  A YF G  G+
Sbjct:   44 EKIRNIGISAHIDSGKTTLTERVLYYTGRIAKMHEVKGKDGVGAVMDSMELERQRGITIQSAATYTMWKDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTVNRQMKRYNVPFLTFINKLDRMGSNPARALQQMRSKLNHNAAFMQIPMGLEGNFKGIVDLIEERAIYFDGDFGQ 231          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_DICDI (Elongation factor G, mitochondrial OS=Dictyostelium discoideum GN=gfm1 PE=3 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 2.569e-74
Identity = 140/191 (73.30%), Postives = 158/191 (82.72%), Query Frame = 3
Query:  276 SMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGEK 848
            S+  LRNIGISAHIDSGKTTLTERIL+YTGRI EIHEVRG+DGVGAKMDSMDLEREKGITIQSAAT C W +  INIIDTPGHVDFT+EVERALRVLDGA+LV+C V GVQSQ+ITVDRQMRRY VPR+ FINKLDR GA+PW V++Q R KL  +  A+QVP+G E   +G++DLV   A  F    GEK
Sbjct:   36 SVSGLRNIGISAHIDSGKTTLTERILYYTGRIKEIHEVRGKDGVGAKMDSMDLEREKGITIQSAATYCKWGENHINIIDTPGHVDFTIEVERALRVLDGAVLVMCGVSGVQSQTITVDRQMRRYNVPRVVFINKLDRTGANPWNVIEQLRKKLNLNAIALQVPIGKESNLEGVIDLVTEKAMIF----GEK 222          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_COPC7 (Elongation factor G, mitochondrial OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=MEF1 PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 4.381e-74
Identity = 139/194 (71.65%), Postives = 160/194 (82.47%), Query Frame = 3
Query:  291 RNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWK----------DYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            RNIGISAHIDSGKTTL+ERILFYTG+I EIHEVRGRD VGAKMD+MDLEREKGITIQSAAT C W+           Y IN+IDTPGHVDFT+EVERALRVLDGAILVLC+V GVQSQ+ TVDRQMRRY VPR++FINK+DR GA+PW++++Q R+KLR   AAVQVP+G ED+ +G+VDLV   A Y  G  G
Sbjct:  105 RNIGISAHIDSGKTTLSERILFYTGKIREIHEVRGRDAVGAKMDNMDLEREKGITIQSAATFCDWEATNPEDGSKQKYSINVIDTPGHVDFTIEVERALRVLDGAILVLCAVAGVQSQTTTVDRQMRRYNVPRISFINKMDRPGANPWRIVNQIRTKLRMPAAAVQVPIGTEDELKGVVDLVHWRALYNEGPKG 298          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_CANAL (Elongation factor G, mitochondrial OS=Candida albicans GN=MEF1 PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 4.381e-74
Identity = 132/195 (67.69%), Postives = 160/195 (82.05%), Query Frame = 3
Query:  273 ESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW----KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            ++  RLRNIGISAHIDSGKTT TER+LFYTGRI  IHEVRG+D VGAKMD MDLEREKGITIQSAAT C+W    K Y  N+IDTPGH+DFT+EVERALRVLDGA+LV+C+V GVQSQ++TVDRQMRRY VPR+ FINK+DRMGA+PW+ ++Q  +KL+   AA+QVP+G E+  QG+V+++   A Y  G  GE
Sbjct:   63 QASTRLRNIGISAHIDSGKTTFTERVLFYTGRIKAIHEVRGKDSVGAKMDHMDLEREKGITIQSAATYCSWDKDDKSYHFNLIDTPGHIDFTIEVERALRVLDGAVLVVCAVAGVQSQTVTVDRQMRRYNVPRVTFINKMDRMGANPWRAIEQINAKLKIPAAAIQVPIGAEENLQGVVNIIDRVALYNEGEQGE 257          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_SCLS1 (Elongation factor G, mitochondrial OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=mef1 PE=3 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 5.722e-74
Identity = 134/200 (67.00%), Postives = 165/200 (82.50%), Query Frame = 3
Query:  270 KESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW--------KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            ++ + R+RNIGI+AHIDSGKTT TER+LFYTGRI+ IHEVRG+D VGAKMDSM+LEREKGITIQSAAT C W        + Y IN+IDTPGH+DFT+EVERALRVLDGA+++LC+V GVQSQ+ITVDRQMRRY VPR++FINK+DRMGA+P+K ++Q   KLR   AA+QVP+G ED F G+VDL+++ A Y  G  GE
Sbjct:   95 RDRLRRVRNIGIAAHIDSGKTTATERVLFYTGRINAIHEVRGKDAVGAKMDSMELEREKGITIQSAATFCDWMKVENGKEEKYHINLIDTPGHIDFTIEVERALRVLDGAVMILCAVSGVQSQTITVDRQMRRYNVPRISFINKMDRMGANPFKAVEQINQKLRIPAAALQVPIGSEDSFNGVVDLIRMKAIYNDGPKGE 294          
The following BLAST results are available for this feature:
BLAST of FC910032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFG1_SYNAS8.828e-7568.75Elongation factor G 1 OS=Syntrophus aciditrophicus... [more]
EFGM_VANPO1.153e-7468.21Elongation factor G, mitochondrial OS=Vanderwaltoz... [more]
EFGM_CANDC1.506e-7468.21Elongation factor G, mitochondrial OS=Candida dubl... [more]
EFGM_ASPOR1.967e-7460.17Elongation factor G, mitochondrial OS=Aspergillus ... [more]
EFGM_ASPFN1.967e-7460.17Elongation factor G, mitochondrial OS=Aspergillus ... [more]
EFGM_HUMAN2.569e-7470.74Elongation factor G, mitochondrial OS=Homo sapiens... [more]
EFGM_DICDI2.569e-7473.30Elongation factor G, mitochondrial OS=Dictyosteliu... [more]
EFGM_COPC74.381e-7471.65Elongation factor G, mitochondrial OS=Coprinopsis ... [more]
EFGM_CANAL4.381e-7467.69Elongation factor G, mitochondrial OS=Candida albi... [more]
EFGM_SCLS15.722e-7467.00Elongation factor G, mitochondrial OS=Sclerotinia ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA27CC11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA27CC11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910032 ID=FC910032; Name=FC910032; organism=Citrus clementina; type=EST; length=857bp
AACAGTACAACAAACCCTCGAACCCCAAACCCTTAAAAAATCTCAGGGTT
TAGGGTTTTAGATAAAAAAAAGCGATGGCTAGATTCCCACGATCTCCAGC
ACCACGTCTCCTCTACACTCTCTTCTCCTCTTCGAGAACGACACCGACCA
AATCCTCACCCCAATCTCCGTCTGCAGCCCTCCTCCAAGGAAACTTCCAC
CTCCAGTCGCGGCAGTTCTCGGCGGGAGGAAACCTCGCACGTGCGAAGGA
TGATAAGGAGCCATGGTGGAAGGAATCAATGGAGCGGCTCCGAAATATCG
GAATCTCGGCGCATATCGATTCCGGAAAAACTACACTAACCGAGCGAATT
CTGTTTTACACTGGACGGATTCACGAGATTCACGAGGTTCGAGGGCGAGA
CGGCGTCGGCGCCAAAATGGATTCTATGGATTTGGAGCGTGAGAAAGGTA
TCACAATTCAGTCAGCCGCCACTAGCTGTGCTTGGAAGGATTACCAGATT
AATATAATTGACACTCCTGGACACGTAGACTTCACAGTTGAAGTAGAAAG
GGCTTTGCGAGTTCTTGATGGCGCAATTCTTGTGCTTTGTAGTGTTGGTG
GCGTGCAAAGTCAATCAATTACCGTTGACCGGCAAATGAGGAGATACGAG
GTGCCAAGGCTGGCTTTCATTAACAAACTTGATAGAATGGGAGCTGATCC
ATGGAAAGTTTTGGATCAGGCAAGGTCTAAGCTGCGGCACCACTGTGCTG
CTGTGCAAGTTCCAATGGGATTGGAAGATCAGTTTCAGGGTCTTGTGGAC
CTTGTGCAGTTAACAGCTTATTATTTTCATGGTTCCCATGGTGAAAAAAA
TTGTCAC
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