FC910032

Overview
NameFC910032
Unique NameFC910032
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length857
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_PROMH (Elongation factor G OS=Proteus mirabilis (strain HI4320) GN=fusA PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.212e-51
Identity = 103/185 (55.68%), Postives = 141/185 (76.22%), Query Frame = 3
Query:  285 RLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW-------KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTA 818
            R RNIGISAHID+GKTT +ERILFYTG  H+I E    +G  A MD M+ E+E+GITI SAAT+  W       + +++NIIDTPGHVDFT+EVER++RVLDGA++V C+VGGVQ QS TV RQ  +Y VPR+AF+NK+DRMGA+  +V++Q +++L  +   +Q+P+G E+ F G+VDL+++ A
Sbjct:    9 RYRNIGISAHIDAGKTTTSERILFYTGVNHKIGETH--EG-SATMDWMEQEQERGITITSAATTAFWSGMAKQFEPHRVNIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYHVPRIAFVNKMDRMGANFLRVVEQIKTRLAANPVPLQIPVGAEEDFTGVVDLIKMKA 190          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_PETMO (Elongation factor G OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=fusA PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.212e-51
Identity = 105/189 (55.56%), Postives = 140/189 (74.07%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            +E++RNIGI AHID+GKTT TERILFYTG  H++  V   D    + D M+ E+E+GITI SAATS  WKD++INIIDTPGHVDFTVEVER+LRVLDGAI V  +  GV+ QS TV RQ  RY VPR+AF+NK+D++GA+ +  +   + KL  +  A+QVP+G E +F+G+VDL+ + A Y+   +G+
Sbjct:    8 IEKIRNIGIVAHIDAGKTTTTERILFYTGTKHKLGNV---DEGTTETDWMEQEKERGITITSAATSAFWKDHRINIIDTPGHVDFTVEVERSLRVLDGAIAVFDAQVGVEPQSETVWRQADRYRVPRIAFMNKMDKIGANFFNAIQTMKDKLGANPIALQVPIGSEAEFEGVVDLLTMEALYWTDENGQ 193          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_PELUB (Elongation factor G OS=Pelagibacter ubique GN=fusA PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.212e-51
Identity = 101/181 (55.80%), Postives = 136/181 (75.14%), Query Frame = 3
Query:  276 SMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTA 818
            ++ + RNIGI AHID+GKTT TERIL+YTG+ H+I EV   DG  A MD M+ E+E+GITI SAAT+C W D++INIIDTPGHVDFT+EVER+L+VLDGA+ V   V GV+ QS TV RQ  +Y+VPR+ F+NKLDR GAD ++ ++  + +L      +Q+P+G+E    G+VDLV++ A
Sbjct:    6 TLNKYRNIGIMAHIDAGKTTTTERILYYTGKSHKIGEVH--DGA-ATMDWMEQEQERGITITSAATTCFWNDHRINIIDTPGHVDFTIEVERSLKVLDGAVCVFDGVAGVEPQSETVWRQADKYKVPRICFVNKLDRTGADFYRCVEMIKDRLGCKPLPIQIPIGIEADLSGVVDLVKMKA 183          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_CLOB8 (Elongation factor G OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=fusA PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.212e-51
Identity = 100/192 (52.08%), Postives = 139/192 (72.40%), Query Frame = 3
Query:  270 KESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            K  +++ RN GI AHID+GKTT TERILFYTG  H+I EV   +   A MD M  E+E+GITI SAATSC WK++++NIIDTPGHVDFTVEVER+LRVLDGA+ VL +  GV+ Q+ TV RQ  +Y VPR+ ++NK+D  GAD ++ +   + +L+ +   +Q+P+G E  F+G+VDL++  A+ F+   G+
Sbjct:    4 KYPLDKFRNFGIMAHIDAGKTTTTERILFYTGVSHKIGEVHDGE---ATMDWMVQEQERGITITSAATSCFWKEHELNIIDTPGHVDFTVEVERSLRVLDGAVTVLDAKSGVEPQTETVWRQADKYGVPRMIYVNKMDATGADFFRCIQTVKDRLKANAVPIQIPVGSEQGFKGMVDLIKNVAFIFYDDLGK 192          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_BAUCH (Elongation factor G OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=fusA PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.212e-51
Identity = 102/187 (54.55%), Postives = 139/187 (74.33%), Query Frame = 3
Query:  291 RNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKD-------YQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFH 830
            RNIGISAHID+GKTT TERILFYTG  H+I EV       A MD M  E+E+GITI SAAT+C W         ++INIIDTPGHVDFT+EVER++R+LDG +++ C+VGGVQ QS TV RQ  +Y+VPR+AF+NK+DRMGA+  +V++Q R++L      +Q+ +G E+ F G++DLV++ A +++
Sbjct:   11 RNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHHG---AATMDWMAQEQERGITITSAATTCFWSGMAKQFNAHRINIIDTPGHVDFTIEVERSMRILDGVVMIYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANYLRVVEQIRTRLSAKPVPIQLAIGAEENFTGVIDLVKMKAIHWN 194          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_PELLD (Elongation factor G OS=Pelodictyon luteolum (strain DSM 273) GN=fusA PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.807e-51
Identity = 103/198 (52.02%), Postives = 141/198 (71.21%), Query Frame = 3
Query:  276 SMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW---------KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            +++++RNIGI AHID+GKTT TERIL+YTGR+H + EV   DG GA MD MD E+E+GITI SAAT+C W         + ++INIIDTPGHVDFTVEVER+LRVLDGA+ + C+VGGV+ QS TV RQ  +Y VPR+A++NK+DR GAD +  +   + +L  +   +Q+P+G  + F G VDL+++    +    G
Sbjct:    6 ALDKVRNIGIMAHIDAGKTTTTERILYYTGRLHRMGEVH--DG-GATMDWMDQEKERGITITSAATTCFWAPKFGNYEGEKHRINIIDTPGHVDFTVEVERSLRVLDGAVALFCAVGGVEPQSETVWRQANKYGVPRVAYVNKMDRTGADFFDTVKSIKERLSANPVPIQIPIGEGEIFAGFVDLIRMKGIIYDKEDG 200          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_LACAC (Elongation factor G OS=Lactobacillus acidophilus GN=fusA PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.807e-51
Identity = 100/180 (55.56%), Postives = 133/180 (73.89%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTA 818
            + + RNIGI AHID+GKTT TERIL+YTG+IH+I E    D   ++MD MD E+E+GITI SAAT+  WKDY+INIIDTPGHVDFT+EVER+LRVLDGA+ VL +  GV+ Q+  V RQ   Y VPR+ F+NK+D++GAD  K +     +L  +  AVQ+P+G  D F+G++DL+ + A
Sbjct:    9 LAKTRNIGIMAHIDAGKTTTTERILYYTGKIHKIGETHEGD---SQMDWMDEEKERGITITSAATTAQWKDYRINIIDTPGHVDFTIEVERSLRVLDGAVTVLDAQAGVEPQTENVWRQAETYGVPRIVFVNKMDKIGADFDKSVKSLHERLNANAQAVQMPIGSADTFEGVIDLINMVA 185          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_EXIS2 (Elongation factor G OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=fusA PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.807e-51
Identity = 102/189 (53.97%), Postives = 139/189 (73.54%), Query Frame = 3
Query:  276 SMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            S++  RNIGI AHID+GKTT TERIL+YTGRIH+I E    +G  ++MD M+ E+E+GITI SAAT+  WK  ++NIIDTPGHVDFTVEVER+LRVLDGA+ VL +  GV+ Q+ TV RQ   Y VPR+ F+NK+D++GAD    +   R +L+ +  A+Q+P+G ED+F+G++DLV+   Y +    G
Sbjct:    6 SLKNTRNIGIMAHIDAGKTTTTERILYYTGRIHKIGETH--EGA-SQMDWMEQEQERGITITSAATTAQWKGNRVNIIDTPGHVDFTVEVERSLRVLDGAVAVLDAQSGVEPQTETVWRQATTYGVPRIVFVNKMDKIGADFLYSVGTLRDRLQANAHAIQIPIGAEDEFKGIIDLVEKKTYMYGNDLG 191          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG1_SYNWW (Elongation factor G 1 OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=fusA1 PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.807e-51
Identity = 95/188 (50.53%), Postives = 136/188 (72.34%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            ++ LRNIGI AHID+GKTT TERIL+YTG  H++ E    D +   MD +  E+E+GIT+ SAAT C WK   INIIDTPGHVDFT EVER+LR+LDGA+++ C  GGV+ QS TV RQ  +Y++PR+A++NK+D +GAD ++V++Q + +L  +   + +P+  E+ F G++DL+++  Y F G  G
Sbjct:    2 LKELRNIGIIAHIDAGKTTTTERILYYTGLTHKMGETHDGDSI---MDFLPWEKERGITVASAATRCFWKGNTINIIDTPGHVDFTAEVERSLRILDGAVVIFCGKGGVEPQSETVWRQADKYQIPRIAYVNKMDAVGADFFRVIEQIKQRLGSNPLVISLPVFKEECFSGIIDLIKMKYYTFAGKLG 186          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_PELPB (Elongation factor G OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=fusA PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.890e-51
Identity = 104/197 (52.79%), Postives = 142/197 (72.08%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWK---------DYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            ++++RNIGI AHID+GKTT TERIL+YTGR+H + EV   DG GA MD MD E+E+GITI SAAT+C W          +++INIIDTPGHVDFTVEVER+LRVLDGA+ + C+VGGV+ QS TV RQ  +Y VPR+A+INK+DR GA+ ++ +   R +L  +   +Q+P+G  + F G VDL+++    ++   G
Sbjct:    7 LDKVRNIGIMAHIDAGKTTTTERILYYTGRLHRMGEVH--DG-GATMDWMDQEKERGITITSAATTCFWMPKFGNYIGVNHRINIIDTPGHVDFTVEVERSLRVLDGAVALFCAVGGVEPQSETVWRQANKYGVPRIAYINKMDRTGANFFETVKAIRERLGANPVPLQIPIGEGEIFAGFVDLIRMKGIIYNKEDG 200          
The following BLAST results are available for this feature:
BLAST of FC910032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFG_PROMH5.212e-5155.68Elongation factor G OS=Proteus mirabilis (strain H... [more]
EFG_PETMO5.212e-5155.56Elongation factor G OS=Petrotoga mobilis (strain D... [more]
EFG_PELUB5.212e-5155.80Elongation factor G OS=Pelagibacter ubique GN=fusA... [more]
EFG_CLOB85.212e-5152.08Elongation factor G OS=Clostridium beijerinckii (s... [more]
EFG_BAUCH5.212e-5154.55Elongation factor G OS=Baumannia cicadellinicola s... [more]
EFG_PELLD6.807e-5152.02Elongation factor G OS=Pelodictyon luteolum (strai... [more]
EFG_LACAC6.807e-5155.56Elongation factor G OS=Lactobacillus acidophilus G... [more]
EFG_EXIS26.807e-5153.97Elongation factor G OS=Exiguobacterium sibiricum (... [more]
EFG1_SYNWW6.807e-5150.53Elongation factor G 1 OS=Syntrophomonas wolfei sub... [more]
EFG_PELPB8.890e-5152.79Elongation factor G OS=Pelodictyon phaeoclathratif... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA27CC11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA27CC11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910032 ID=FC910032; Name=FC910032; organism=Citrus clementina; type=EST; length=857bp
AACAGTACAACAAACCCTCGAACCCCAAACCCTTAAAAAATCTCAGGGTT
TAGGGTTTTAGATAAAAAAAAGCGATGGCTAGATTCCCACGATCTCCAGC
ACCACGTCTCCTCTACACTCTCTTCTCCTCTTCGAGAACGACACCGACCA
AATCCTCACCCCAATCTCCGTCTGCAGCCCTCCTCCAAGGAAACTTCCAC
CTCCAGTCGCGGCAGTTCTCGGCGGGAGGAAACCTCGCACGTGCGAAGGA
TGATAAGGAGCCATGGTGGAAGGAATCAATGGAGCGGCTCCGAAATATCG
GAATCTCGGCGCATATCGATTCCGGAAAAACTACACTAACCGAGCGAATT
CTGTTTTACACTGGACGGATTCACGAGATTCACGAGGTTCGAGGGCGAGA
CGGCGTCGGCGCCAAAATGGATTCTATGGATTTGGAGCGTGAGAAAGGTA
TCACAATTCAGTCAGCCGCCACTAGCTGTGCTTGGAAGGATTACCAGATT
AATATAATTGACACTCCTGGACACGTAGACTTCACAGTTGAAGTAGAAAG
GGCTTTGCGAGTTCTTGATGGCGCAATTCTTGTGCTTTGTAGTGTTGGTG
GCGTGCAAAGTCAATCAATTACCGTTGACCGGCAAATGAGGAGATACGAG
GTGCCAAGGCTGGCTTTCATTAACAAACTTGATAGAATGGGAGCTGATCC
ATGGAAAGTTTTGGATCAGGCAAGGTCTAAGCTGCGGCACCACTGTGCTG
CTGTGCAAGTTCCAATGGGATTGGAAGATCAGTTTCAGGGTCTTGTGGAC
CTTGTGCAGTTAACAGCTTATTATTTTCATGGTTCCCATGGTGAAAAAAA
TTGTCAC
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